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ProteomicsCross-tissue deep profiling of redox proteome in obese mice
Cellular redox state, the balance between oxidation and reduction, is precisely regulated through cysteine thiol modification. In this study, we developed a novel method, in conjunction with directed data-independent acquisition (dDIA) for identifying and quantifying a substantial number of sulfhydr...
ORGANISM(S): Mus Musculus 
PXD066139 |
TranscriptomicsEvx1as and EVX1 knockouts by CRISPR
We report that long noncoding RNAs contribute to transcription and developmental process. Thousands of lncRNAs have been identified in the whole genome, and tend to located closely to protein-coding genes. To study position relationship between lncRNA and protein-coding genes, we classified all of l...
ORGANISM(S): Mus musculus 
2016-03-24 | E-GEOD-70419 | biostudies-arrayexpress
ProteomicsS. aureus aggregate with in human synovia
Proteomic data exploring the protein components of bacterial aggregate that formed within human synovial fluid.
ORGANISM(S): Homo sapiens (Human) 
2025-11-06 | PXD060998 | Pride
MetabolomicsIdentification of Biomarkers Using Metabolomics: From Chronic Non-Atrophic Gastritis and Chronic Atrophic Gastritis to Gastric Cancer

Gastric cancer (GC) is a severe malignancy characterized by late diagnosis, poor prognosis and low survival rates. Its progression is often linked to chronic non-atrophic gastritis (CNAG) and chronic atrophic gastritis (CAG), which show atypical symptoms. Identifying biomarkers for CNAG, CAG and ...

2026-09-29 | MTBLS12186 | MetaboLights
ProteomicsHuman VSMC infected with Ad-CEMIP and immunoprecipitated with anti-CEMIP for proteomic analysis
HASMCs were infected with Ad-CEMIP. Whole cell lysates were obtained from 5×108 cells. CEMIP or IgG antibodies are added to capture CEMIP complexes in cell lysates. Agarose beads were washed with IP buffer, CEMIP antibody-binding complexes were captured by adding agarose beads to cell lysates, and n...
ORGANISM(S): Homo Sapiens 
2025-03-20 | PXD062060 |
ProteomicsSMC-CemipKO aortic media immunoprecipitated with anti-MLC20 antibodies for proteomic
Protein was extracted from the aortic media of 8-week-old SMC-CemipKO and Cemipflox/flox mice. Whole-cell lysates were immunoprecipitated with anti-MLC20 antibodies for proteomic analysis. Mass spectrometry identified top 10 MLC20-binding proteins as listed.
ORGANISM(S): Mus Musculus 
2025-03-18 | PXD062008 |
ProteomicsPotential binding partners of NUDT13 in DLD-1
To explore the role of NUDT13 in the initiation and progression of CRC, we performed NUDT13 immunoprecipitation in DLD-1 following LC-MS/MS analysis.
ORGANISM(S): Homo Sapiens 
PXD041430 |
ProteomicsProteotypic differences of follicular-patterned thyroid neoplasms
The diagnosis of follicular-patterned thyroid tumors such as follicular adenoma (FA), follicular thyroid carcinoma (FTC), and follicular variant of papillary thyroid carcinoma (FvPTC) remains challenging. This study aimed to explore the molecular differences among these three thyroid tumors by prote...
ORGANISM(S): Homo Sapiens 
2022-09-07 | PXD036553 |
ProteomicsProtein Lysine 43 Methylation by EZH1 Promotes AML1-ETO Transcriptional Repression
The MS data of Protein Lysine 43 Methylation by EZH1 Promotes AML1-ETO Transcriptional Repression Protein Lysine 43 Methylation by EZH1 Promotes AML1-ETO Transcriptional Repression
ORGANISM(S): Homo Sapiens 
2019-12-11 | PXD016712 |
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