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ProteomicsIdentification of MDN1-dependent proteome changes in Arabidopsis seeds
mdn1-1 is a weak mutant of the Arabidopsis MDN1 gene. mdn1-1 exhibits an increased seed-size phenotype. To further figure out the proteome changes in the mdn1-1 seeds, we applied the iTRAQ-based LC-MS/MS analysis. A total of 3217 proteins were identified in dry seeds of both wild type and mdn1-1. Th...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-11-12 | PXD013784 | Pride
Arabidopsis seeds Mdn1 Itraq 
ProteomicsData independent acquisition for Arabidopsis
To comprehensively assess the influence of PRPS10 haploinsufficiency on chloroplast protein accumulation, we performed DIA-MS. Total proteins were extracted from 3 DAG seedlings of WT, bpg2-2, prps10-1/+, bpg2 prps10/+ grown under normal growth conditions.
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2024-08-09 | PXD027861 | Pride
Arabidopsis Plastid ribosomal protein s10 Bpg2 
ProteomicsInvolvement of low molecular weight tyrosine acid phosphatase in abscisic acid signaling in Arabidopsis
Low molecular weight protein tyrosine phosphatase (LWM-PTP) is highly conserved tyrosine phosphatase from plants to animals. The function and putative targets of plant LWM-PTP homolog is not reported yet. Here, we revealed that Arabidopsis LWM-PTP homolog APH is a functional tyrosine phosphatase. AP...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2022-10-14 | PXD029650 | Pride
Homolog Tyrosine phosphorylation Low molecular weight protein tyrosine phosphatase 
UnknownGene expression ranking change based single sample pre-disease state detection.
Not available
S-EPMC11652538 | biostudies-literature
MetabolomicsCell type-specific proteomics uncovers a RAF15-SnRK2.6/OST1 kinase cascade in guard cells

Multicellular organisms such as plants contain various cell types with specialized functions. Analyzing the characteristics of each cell type reveals specific cell functions and enhances our understanding of organization and function at the organismal level. Guard cells (GCs) are specialized epid...

2024-09-03 | MTBLS3997 | MetaboLights
UnknownNRBF2 homodimerization by its coiled-coil domain strengthens association with the PtdIns3K complex mediated by the MIT domain to promote autophagy.
Not available
S-EPMC12758336 | biostudies-literature
ProteomicsProteomic landscape and clinical prognosis of Japanese encephalitis patients with cognitive impairment phenotype
Quantitative proteomics was used to find the protective effects of traditional Chinese medicine Epimedium, Salvia miltiorrhiza, and Dioscorea nipponica Makino against osteoarthritis.
ORGANISM(S): Homo Sapiens 
PXD021697 |
UnknownThe potent BECN2-ATG14 coiled-coil interaction is selectively critical for endolysosomal degradation of GPRASP1/GASP1-associated GPCRs.
Not available
S-EPMC10549190 | biostudies-literature
UnknownTargeting and repolarizing M2-like tumor-associated macrophage-mediated MR imaging and tumor immunotherapy by biomimetic nanoparticles.
Not available
S-EPMC10617215 | biostudies-literature
ProteomicsOK-SnRK2 cascade mediates osmotic stress signaling in plant
Osmotic stress associated with drought, salinity and cold is a major factor limits plant productivity. A few signaling factors have been identified in the sensing or early signaling of osmotic stress. SNF1-related protein kinase 2 (SnRK2) are quickly activated by osmotic stress and the snrk2 decuple...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2020-01-17 | PXD014435 | Pride
Snrk2 Osmotic stress active protein kinases Osmotic stress 
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