Li Y M YM - OmicsDI

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Unknown (488)
Transcriptomics (28)
Proteomics (28)
Metabolomics (13)
Genomics (4)

Organisms

Homo sapiens (26)
Mus musculus (10)
Campylobacter jejuni (3)
Schizosaccharomyces pombe (2)
Rattus norvegicus (2)
Sus scrofa (2)
Saccharomyces cerevisiae (2)
Fusarium verticillioides (1)
Moniezia expansa (1)
Bradyrhizobium japonicum (1)
Leishmania major (1)
Paracoccidioides brasiliensis (1)
Vitis vinifera (1)
Riemerella anatipestifer RA-YM (1)
Mycobacterium tuberculosis (1)
Plasmodium falciparum 3D7 (1)
Sophora alopecuroides (1)
Triticum aestivum (1)

Repository

biostudies-arrayexpress (28)
pride (19)
MetaboLights (13)
iProX (7)
EGA (4)
PAXDB (2)

Tissue

Cell culture (5)
Epithelial cell (3)
Liver (3)
Blood platelet (1)
Brain (1)
CNS neuron (sensu Vertebrata) (1)
Cell suspension culture (1)
Leaf (1)
Macrophage (1)
Whole body (1)

Disease

Liver carcinoma (2)
Hepatomegaly (1)
Normal (1)
Adenocarcinoma (1)
Autism spectrum disorder (1)
Malaria (1)

Technology Type

Mass Spectrometry (19)
Mass spectrometry (13)
Shotgun proteomics (8)
Bottom-up proteomics (6)
Gel-based experiment (3)
Top-down proteomics (3)
Illumina HiSeq 2000 (2)
All-ion fragmentation (2)
Affinity purification coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (5)
Liquid Chromatography MS - positive - reverse phase (4)
Gas Chromatography MS - (3)
Liquid Chromatography MS - negative (2)
6540 Q-TOF LC/MS (Agilent) (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (POS)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - positive (1)

Publication Date

2024 (13)
2023 (7)
2010 (6)
2013 (5)
2011 (5)
2022 (5)
2014 (4)
2009 (4)
2020 (3)
2015 (2)
2012 (2)
2006 (2)
2021 (2)
2026 (2)
2017 (2)
2007 (1)
2019 (1)
2018 (1)
2016 (1)
2025 (1)

UNIPROT ID/AC

1FEH1_WHEAT (2)
4565.Traes_1AL_3CF82DD08.2 (2)
4565.Traes_1AL_3FDB6FDB4.1 (2)
4565.Traes_1AL_44FB362A9.2 (2)
4565.Traes_1AL_4E621A250.2 (2)
4565.Traes_1AL_51D597B92.1 (2)
4565.Traes_1AL_52E56C8D3.1 (2)
4565.Traes_1AL_53F3380AF.1 (2)
4565.Traes_1AL_5E2C30B46.1 (2)
4565.Traes_1AL_6B64D0E80.1 (2)
4565.Traes_1AL_72202D9DF.1 (2)
4565.Traes_1AL_738358449.1 (2)
4565.Traes_1AL_78CB13657.2 (2)
4565.Traes_1AL_7B509569F.1 (2)
4565.Traes_1AL_7CF571E9F.1 (2)
4565.Traes_1AL_7D6DC73FC.2 (2)
4565.Traes_1AL_9C2D7A0A6.1 (2)
4565.Traes_1AL_9EFC68149.1 (2)
4565.Traes_1AL_A47D32D30.1 (2)
4565.Traes_1AL_A69755144.1 (2)
4565.Traes_1AL_B15921488.1 (2)
4565.Traes_1AL_BAAF4391C.1 (2)
4565.Traes_1AL_BAB3D977B.1 (2)
4565.Traes_1AL_D06A380E9.2 (2)
4565.Traes_1AL_D39C4F23A.2 (2)
4565.Traes_1AL_D789B5634.1 (2)
4565.Traes_1AL_D8B97BD8D.1 (2)
4565.Traes_1AL_D8FE82B94.1 (2)
4565.Traes_1AL_E07235CF1.1 (2)
4565.Traes_1AL_EEB8BBB6B.1 (2)

CHEBI ID

CHEBI:15354 (4)
CHEBI:16750 (4)
CHEBI:15891 (3)
CHEBI:15971 (3)
CHEBI:16414 (3)
CHEBI:16467 (3)
CHEBI:17191 (3)
CHEBI:17203 (3)
CHEBI:17295 (3)
CHEBI:17895 (3)
CHEBI:18012 (3)
CHEBI:18050 (3)
CHEBI:30769 (3)
CHEBI:6650 (3)
CHEBI:7916 (3)
CHEBI:15428 (2)
CHEBI:15727 (2)
CHEBI:15741 (2)
CHEBI:15756 (2)
CHEBI:15846 (2)
CHEBI:15940 (2)
CHEBI:16015 (2)
CHEBI:16027 (2)
CHEBI:16335 (2)
CHEBI:16359 (2)
CHEBI:16393 (2)
CHEBI:16643 (2)
CHEBI:16704 (2)
CHEBI:16708 (2)
CHEBI:16737 (2)

Metabolite Name

Choline (3)
Guanosine (3)
Taurine (3)
4-Hydroxybenzaldehyde (2)
Adenine (2)
Adenosine (2)
Alanine (2)
Anserine (2)
Asparagine (2)
Aspartic acid (2)
Carnosine (2)
Chenodeoxycholic acid (2)
Cholic acid (2)
Citric acid (2)
Citrulline (2)
Creatinine (2)
Cytidine (2)
Deoxycholic acid (2)
Dodecanoic acid (2)
Fumaric acid (2)
Glycine (2)
Hypoxanthine (2)
Isoleucine (2)
L-Phenylalanine (2)
L-Proline (2)
L-Tyrosine (2)
L-Valine (2)
Leucine (2)
Linoleic acid (2)
Lysine (2)

Modification

4-tetrahydrothiazine-3-carboxylic acid (1)

Study type

Transcription profiling by array (26)
Transcription profiling by tiling array (1)
RNA-seq of coding RNA (1)

Release Date

2024 (69)
2022 (62)
2021 (55)
2023 (51)
2020 (47)
2025 (45)
2016 (29)
2018 (27)
2017 (21)
2015 (20)
2019 (18)
2014 (17)
2011 (14)
2013 (10)
2026 (8)
2012 (7)
2010 (6)
2009 (4)
2006 (3)
2007 (2)
2005 (1)

Lab affiliation

School of Food and Biological Engineering, Hefei University of Technology, Hefei, 230009, China (3)
State Key Laboratory of Genetic Engineering, Department of Biochemistry, School of Life Sciences, Fudan University, Shanghai 200438, China (2)
State Key Laboratory of Oncology in South China (2)
Department of Bioloigcal Science, National University of Singapore (1)
Department of Genetics and Development, Columbia University Irving Medical Center, New York, NY 10032, USA (1)
Hefei University of Technology (1)
Immunology and Microbial Pathogenesis Program, Graduate School of Medical Sciences, Weill Cornell Medicine, New York, NY, USA; Immunology Program, Sloan Kettering Institute, New York, NY, USA; Infectious Diseases Service, Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA. (1)
Institute of Genetics & Developmental Biology, Chinese Academy of Sciences (1)
Key Laboratory of Modern Molecular Breeding of Advantageous Crops of Ningxia, School of Agriculture, Ningxia University, Yinchuan, Ningxia 750021, China (1)
National Key Laboratory of Medical Immunology & Institute of Immunology, Second Military Medical University (1)
Obstetrics & Gynecology Institute, Institute of Metabolism and Integrative Biology, Institutes of Biomedical Sciences, Fudan University, Shanghai, China (1)
School of Food and Biological Engineering, Hefei University of Technology (1)
State Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China (1)
The First Affiliated Hospital, Sun Yat-sen University (1)
school of life sciences (1)

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Exogenous L-Alanine promotes phagocytosis multidrug-resistant bacterial pathogens (V. parahaemolyticus-infected spleen metabolomics)

Multidrug-resistant bacteria present a major threat to public health. Therefore, new drugs or approaches are urgently needed to manage and mitigate this threat. Here, we screen the molecular candidates that allow the survival of mice upon Vibrio parahaemolyticus infection by integrated p...

2024-09-26 | MTBLS7996 | MetaboLights

Liver miRNA profiles of newborn male Erhualian and Large White piglets using LC Sciences Pig miRNA Array

Erhualian (EHL) is one of the seven strains included in a Chinese indigenous pig breed called Taihu. EHL is famous for its early sexual maturity, large litter size, high adiposity, mild temper, good maternity and high tolerance to roughage and stress. To further investigate the role of miRNAs in dif...

ORGANISM(S): Sus scrofa

2012-06-17 | E-GEOD-33523 | biostudies-arrayexpress

Structural and Chemical Evolutions of Li/Electrolyte Interfaces in Li-Metal Batteries: Tracing Compositional Changes of Electrolytes under Practical Conditions.

Not available

S-EPMC9839847 | biostudies-literature

Exogenous L-Alanine promotes phagocytosis multidrug-resistant bacterial pathogens (L-Alanine-treated macrophage metabolomics)

2024-09-26 | MTBLS7986 | MetaboLights

Transcriptome analyses during fruiting body formation in Fusarium graminearum and Fusarium verticillioides reflect species life history and ecology

Fusarium graminearum and F. verticillioides are devastating cereal pathogens with very different life history and ecological characteristics. F. graminearum is homothallic, and sexual spores are an important component of its life cycle, responsible for disease initiation. F. verticilloides is hetero...

ORGANISM(S): Fusarium verticillioides

2014-09-30 | E-GEOD-61865 | biostudies-arrayexpress

Sn_xP_y Monolayers: a New Type of Two-Dimensional Materials with High Stability, Carrier Mobility, and Magnetic Properties.

Not available

S-EPMC7391462 | biostudies-literature

Adhesins, which could adhere to the duck embryo cell that belongs to the outer membrane proteins of Riemerella anatipestifer RA-YM strain sequencing by mass spectrometry (LC-MS/MS)

Infectious serositis of ducks caused by Riemerella anatipestifer infection has brought great losses to poultry industry all over the world. Adhesion and invasion were important pathway of the infection of Riemerella anatipestifer. Gram-negative pathogens’ adhesion and invasion of host cells by means...

ORGANISM(S): Riemerella Anatipestifer Ra-ym

2024-10-27 | PXD057236 |

UTR introns, antisense RNA and differentially spliced transcripts between Plasmodium yoelii subspecies.

Not available

S-EPMC4721144 | biostudies-literature

Characterization of CTX-M-140, a Variant of CTX-M-14 Extended-Spectrum β-Lactamase with Decreased Cephalosporin Hydrolytic Activity, from Cephalosporin-Resistant Proteus mirabilis.

Not available

S-EPMC5038311 | biostudies-literature

Melanoleuca subgriseoflava and M. substridula-two new Melanoleuca species (Agaricales, Basidiomycota) described from China.

Not available

S-EPMC9496501 | biostudies-literature