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TranscriptomicsWhole Blood Gene Expression Analysis of Controls and CRC Patients
Colorectal cancer is the third most common malignancy and the fourth most common cause of cancer mortality worldwide. In 2008, more than one million cases were newly diagnosed, and more than 600,000 people died from the disease. Given its slow development from removable precancerous lesions and cura...
ORGANISM(S): Homo sapiens 
2013-05-03 | E-MTAB-1532 | biostudies-arrayexpress
UnknownElectrochemical Reduction of CO2 to CO over Transition Metal/N-Doped Carbon Catalysts: The Active Sites and Reaction Mechanism.
Not available
S-EPMC8693035 | biostudies-literature
GenomicsHP1BP3, a chromatin retention factor for co-transcriptional microRNA processing (ChIP-Seq)
Identification and characterization of HP1BP3 (a human histone H1 homologue) as a novel chromatin retention factor essential for the co-transcriptional processing of pri-miRNA. We generated BAC transgenic cells at 80% confluency (~1x107) were cross-linked with 1% formaldehyde for 10 minutes at 37°C...
ORGANISM(S): Homo sapiens 
2016-07-24 | E-GEOD-77854 | biostudies-arrayexpress
TranscriptomicsExpression profiling of long noncoding RNAs and mRNAs in mouse heart, whole blood (WB), and plasma.
Long noncoding RNA profile in the heart, whole blood, and plasma before and heart failure (HF). In the study presented here, we mixed the five pairs of mouse hearts, whole blood, and plasma before and after HF and identified the genome-wide expression level of lncRNAs.
ORGANISM(S): Mus musculus 
2013-11-12 | E-GEOD-48885 | biostudies-arrayexpress
MetabolomicsIdentification of BolA protein reveals a novel virulence factor in Klebsiella pneumoniae that contributes to liver abscess in mice

BolA has been characterized as an important transcriptional regulator, which is induced in the stationary phase of growth and is often associated with bacterial virulence. This study was initiated to elucidate the role of the BolA in the virulence of K. pneumoniae. Using a mous...

2022-09-13 | MTBLS2712 | MetaboLights
TranscriptomicsBlood Gene Expression Profiling in Colorectal Cancer
In this work, we performed gene expression profiling for twenty-paired blood samples collected from healthy controls before and after colonoscopy, and twenty blood samples collected from
colorectal cancer patients after colonoscopy. The aim of this study is to determine how significant the colono...
ORGANISM(S): Homo sapiens 
2013-10-01 | E-MEXP-3756 | biostudies-arrayexpress
TranscriptomicsHP1BP3, a chromatin retention factor for co-transcriptional microRNA processing (miRNA-Seq)
Identification and characterization of HP1BP3 (a human histone H1 homologue) as a novel chromatin retention factor essential for the co-transcriptional processing of pri-miRNA. Compare global miRNA expression profile between control sample and sample depleted of HP1BP3
ORGANISM(S): Homo sapiens 
2016-07-24 | E-GEOD-77855 | biostudies-arrayexpress
ProteomicsSequencing the skin proteome of Gymnocypris przewalskii
Dorsal and rump tissues of Gymnocypris przewalskii were taken for DIA quantitative proteomic assay analysis, comparing the two groups of proteomic data, screening the two groups of differential proteins, and providing basic data for scale development of Gymnocypris przewalskii
ORGANISM(S): Gymnocypris Przewalskii 
PXD042214 |
TranscriptomicsGlobal identification of growth-related long non-coding RNAs in breast muscle of chicken
Long non-coding RNAs (lncRNAs) can have potential roles in development of tissues and organs. We selected breast muscle of fast-growing White Recessive Rock chicken (WRR) and slow-growing Xing Hua chicken (XH) to identify lncRNA transcripts by LncRNA-Seq. This study identified 21,993 novel lncRNAs. ...
ORGANISM(S): Gallus gallus 
2014-06-24 | E-GEOD-58755 | biostudies-arrayexpress
ProteomicsDefining super-enhancer landscape in triple-negative breast cancer by multiomic profiling
Here we apply integrated epigenomic and transcriptomic profiling to uncover super-enhancer heterogeneity between breast cancer subtypes, and provide clinically relevant biological insights towards TNBC. Using CRISPR/Cas9-mediated gene editing, we identify genes that are specifically regulated by TNB...
ORGANISM(S): Homo Sapiens 
2021-03-04 | PXD024505 |
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