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TranscriptomicsGenome-wide expression profiling of the response to D-limonene in Saccharomyces cerevisiae
Metabolic engineering of Saccharomyces cerevisiae for efficient monoterpenes production was mostly restricted by the limited tolerance to these chemicals. Understanding of the molecular mechanisms underlying the tolerance of S. cerevisiae to monoterpenes was essential for the de novo biosynthesis th...
ORGANISM(S): Saccharomyces cerevisiae 
2013-12-23 | E-GEOD-34665 | biostudies-arrayexpress
ProteomicsIncreased carvone production in Escherichia coli by balancing limonene conversion enzyme expression via targeted quantification concatamer proteome analysis
The cytochrome P450 limonene-6-hydroxylase (P450), cytochrome P450 reductase (CPR) and carveol dehydrogenase (CDH) were expressed in Escherichia coli for (−)-carvone production from (−)-limonene. The optimum ratio of enzyme expression to maximize (−)-carvone production was determined using the prote...
ORGANISM(S): Escherichia Coli 
2022-08-24 | PXD028077 | JPOST Repository
GenomicsLimonene-degrading stable enrichment culture
Methanogenic limonene-degrading enrichment culture
PRJNA1129558 | ENA
TranscriptomicsExpression profiling of Grosmannia clavigera (Gc) under various conditions
Gc, a Mountain pine beetle associated pathogen, can survive from highly abundant pine chemicals ( e.g terpenes) and use some unflavored compound’s as carbon source. using RNA_Seq, we analyzed the transcriptome of Gc when it grew on limonene, mannose oliver-oil, oleic acid as carbon source, as well...
ORGANISM(S): Grosmannia clavigera 
2013-12-31 | E-GEOD-43006 | biostudies-arrayexpress
ProteomicsProteins differentially expressed during limonene biotransformation by Penicillium digitatum DSM 62840 were examined using iTRAQ labeling coupled with 2D‑LC–MS/MS
In this study, a relative quantitative comparison of proteins that are differentially expressed at two time points during limonene biotransformation (0 and 12 h) is performed using iTRAQ combined with LC–MS/MS. It provides a basis for further study of the molecular mechanism of limonene biotransform...
ORGANISM(S): Penicillium Digitatum 
2020-02-26 | PXD017752 |
TranscriptomicsTracing the transcriptomic changes of synthetic trigenomic allohexaploid in Brassica by RNA-Seq approach
We explored the transcriptomic changes of synthetic Brassica allohexaploid by comparing to its parents using a high-throughput RNA-Seq method. A total of 35644409 sequence reads were generated, and 32642 genes were aligned from the data. There were 29260, 29060 and 29697 genes identified in Brassica...
ORGANISM(S): Brassica carinata x Brassica rapa 
2014-10-10 | E-GEOD-46299 | biostudies-arrayexpress
ProteomicsEnhanced limonene production in Synechococcus elongatus PCC 7942
In this study, through computational modeling and synthetic biology tools, we identified and overcame a key flux controlling node in MEP-derived terpene biosynthesis in cyanobacteria. This strategy bypasses the limitation in traditional stepwise metabolic engineering, and led to significantly higher...
ORGANISM(S): Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2) 
2016-12-07 | PXD005105 | Pride
Limonene mep terpene modeling atp/nadph 
TranscriptomicsDownregulated d-limonene transgenic orange trees with increased linalool content showed resistance to Phyllosticta citricarpa
Terpene volatiles play an important role in the interactions among specialized pathogens and fruits. Citrus Black Spot (CBS), caused by the fungus Phyllosticta citricarpa, is associated with losses in different citrus-growing areas worldwide. The pathogen may infect the fruit for 20-24 weeks after p...
ORGANISM(S): Citrus sinensis Citrus 
2018-04-13 | GSE99295 | GEO
Genomics
Effect of limonene on solanacearum
PRJNA1205659 | ENA
UnknownBiotechnological production of limonene in microorganisms.
Not available
S-EPMC4786606 | biostudies-literature
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