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ProteomicsInner membrane proteome of E. coli Min mutant
In bacteria, proteins of the MinD/ParA superfamily are reported to partition DNA and protein complexes to designate subcellular location. Among them, the E. coli Min system is a prominent example to demonstrate that the protein function is spatially regulated by the dynamic subcellular localization ...
ORGANISM(S): Escherichia coli 
2016-02-23 | PXD002548 | Pride
Cell division The min system Itraq E. coli Membrane 
MetabolomicsMetabolome analysis reveal key regulatory pathways of feed conversion efficiency of oriental river prawn Macrobrachium nipponense

A total of 445 and 247 differently expressed metabolites (DEMs) were identified in the hepatopancreas and muscle. In addition, 11 KEGG pathways, which mainly include lysine biosynthesis, lysine degradation, aminoacyl-tRNA biosynthesis and purine metabolism, were sign...

2023-02-28 | MTBLS6663 | MetaboLights
TranscriptomicsMicroRNA expression profiling in GC-2 cells following 50 Hz ELF-EMF
Aberrant miRNA expression has been related to the development of human germ cell tumors, but little is known about effect of ELF-EMFs on miRNA expression. ELF-EMFs may epigenetically modify cells, which may account for the adverse effects of ELF-EMFs on the male reproductive system. To identify miRN...
ORGANISM(S): Mus musculus 
2016-07-01 | E-GEOD-71147 | biostudies-arrayexpress
ProteomicsMouse Neuroblastoma Cells Proteome by LC-MS/MS
N2a cells were transfected with pCAGGS vector or pCAGGS-RABV-M (expressing rabies virus matrix protein) for 36 hours, cells were lysed for SDS-PAGE. The area where the proteins were located in the SDS-PAGE was scooped and cut into small pieces of about 1 mm3; the decolorization solution (15 mM K3Fe(...
ORGANISM(S): Mus Musculus 
2023-08-09 | PXD044493 |
TranscriptomicsTranscriptomic analysis of grape (Vitis vinifera L.) leaves exposed to ultraviolet C radiation
Solar ultraviolet C（UV-C）radiation reaching the Earth’s surface is little due to the filtering effects of the stratospheric ozone layer. At present, artificial UV-C irradiation is utilized for different biological processes. Grape is a major fruit crop around the world. Research has shown that UV-C ...
ORGANISM(S): Vitis vinifera 
2014-11-15 | E-GEOD-62315 | biostudies-arrayexpress
Transcriptomicsshld1 effect on 3T3 cell
NIH3T3 cells were cultured in medium containing 1 uM, 100 nM, 10 nM and 0 nM (serve as control) shld1 for 24 hours. Three independent cultures were obtained for each drug concentration. Total RNA from experimental samples were extracted using RNeasy Kit (Qiagen). Mouse RNA pooled from 11 cell line...
ORGANISM(S): Mus musculus 
2007-09-27 | E-GEOD-5916 | biostudies-arrayexpress
TranscriptomicsIdentification of rapidly-induced genes in the peanut (Arachis hypogaea) response to water deficit and abscisic acid
Purpose: to screen the candidate genes involved in the peanut drought stress response, we conducted global transcriptome analysis of peanut plants challenged with water deficit and ABA, using the Illumina HiSeq2000 sequencing platform. Methods: a sequences library of Yueyou7 were constructed at firs...
ORGANISM(S): Arachis hypogaea 
2014-05-13 | E-GEOD-56439 | biostudies-arrayexpress
ProteomicsImpact of Alanyl-tRNA Synthetase Editing Deficiency in Yeast
Aminoacyl-tRNA synthetases (aaRSs) are essential enzymes that provide the ribosome with aminoacyl-tRNA substrates for protein synthesis. Mutations in aaRSs lead to various neurological disorders in humans. Many aaRSs utilize editing to prevent error propagation during translation. Editing defects in...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2021-08-26 | PXD026930 | Pride
Label-free quantitative proteomics Yeast alars variants 
MetabolomicsLsr2, a novel cyclic di-GMP receptor, regulate the synthesis of keto-mycolic acid and control biofilm formation in mycobacteria

Cyclic di-GMP (c-di-GMP) is a well-known second messenger that plays a key role in many physiological processes in bacteria. The synthesis of lipids is essential for bacterial biofilm formation. However, whether c-di-GMP signaling modulates the synthesis of lipid and further regulates biofilm for...

2023-12-12 | MTBLS7053 | MetaboLights
UnknownBaicalin alleviates H<sub>2</sub>O<sub>2</sub>-induced oxidative stress injury in human umbilical vein endothelial cells by regulating the TNF-[Formula: see text]-mediated MAPK/ERK1/2/MPO pathway.
Not available
S-EPMC12508144 | biostudies-literature
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