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ProteomicsDetection of N‑glycoprotein associated with IgA nephropathy in urine as a potential diagnostic biomarker using glycosylated proteomic analysis
The present study aimed to clarify the potential diagnosis value of the urinary N-glycoproteins using mass spectrometry (MS) analysis in patients with IgA nephropathy (IgAN).
ORGANISM(S): Homo sapiens (Human) 
2023-08-13 | PXD041151 | Pride
Ms-based proteomics Urine Iga nephropathy Glycoproteins Biomarkers 
ProteomicsProteomic profiles of INS1 cells
In this study, we obtained proteomic profiles of INS1 cells with lipotoxicity and glucolipotoxicity in a time-course fashion.
ORGANISM(S): Rattus rattus (Black rat) 
2018-08-14 | PXD008154 | Pride
Ins1 lipotoxicity glucolipotoxicity 
TranscriptomicsGenome-wide transcriptome analysis of two maize inbred lines under drought stress during the seedling stage
To understand the transcriptome changes during drought tolerance in maize, the drought-tolerant line Han21 and drought-sensitive line Ye478, which show substantial differences in drought tolerance at the seedling stage, were selected for this study. Using the GeneChip Maize Genome Arrays, we applied...
ORGANISM(S): Zea mays 
2010-06-16 | E-GEOD-16567 | biostudies-arrayexpress
ProteomicsInteractome of ferroptosis pathways genes
We conducted a proteomic interactome analysis of well-known regulators of ferroptosis, ACSL4, LPCAT3, ALOX12, ALOX15, PEBP1, NCOA4, GCH1, FSP1, DHODH, SLC7A11, GCLC, GCLM, GSS, and GPX4. Take LPCAT3 as an example, we uncovered an opposing role of its binding protein CEPT1 in suppressing ferroptosis.
ORGANISM(S): Homo sapiens (Human) 
2024-10-17 | PXD035146 | Pride
Ferroptosis Tap-ms Interactome 
ProteomicsGlobal Proteomic Analysis Reveals the Roles of MicX in Biofilm Formation and Quorum Sensing in Vibrio alginolyticus
Vibrio alginolyticus is a foodborne pathogen commonly found in seafood and freshwa-ter products, causing human illness through the consumption of tainted seafood. Small non-coding RNAs (sRNAs) take effect on the stability and translation of their target mRNAs by base pairing, thereby quickly alterin...
ORGANISM(S): Vibrio Alginolyticus Nbrc 15630 = Atcc 17749 
2026-02-05 | PXD073542 |
TranscriptomicsmiR-222 is necessary for exercise-induced cardiac growth and protects against pathological cardiac remodeling.
miR-222 overexpression leads to promotion of proliferation and hypertrophy and inhibition of apoptosis in in primary neonatal rat ventricular cardiomyocytes (NRVMs). Isolated primary neonatal rat ventricular cardiomyocytes were plated in 6 cm BD Primaria tissue culture dishes. Transfection of microR...
ORGANISM(S): Rattus norvegicus 
2016-03-03 | E-GEOD-59641 | biostudies-arrayexpress
ProteomicsSerum Proteomics Identifies Biomarkers for Predicting Non-survivors in Elderly COVID-19 Patients
In December 2022, China ceased the zero-COVID-19 policy, resulting in an increase in hospitalizations and deaths due to COVID-19, particularly among the elderly population. There is a pressing need to understand the disease progress and predict the survival outcomes of elderly patients to reduce the...
ORGANISM(S): Homo Sapiens 
2024-07-12 | PXD053895 |
ProteomicsProteomic Antibacterial Characterization of Flavonoid Xanthohumol and probiotic Clostridium butyricum on Pathogenic Clostridioides difficile
In this study, we evaluated the antimicrobial properties of XN and C. butyricum culture supernatant (CBs) against C. difficile, focusing on their ability to reduce C. difficile adhesion, inhibit growth, and restrict toxin production. Using a dextran sulfate sodium (DSS)-induced Caco-2 intestinal epi...
ORGANISM(S): Clostridioides Difficile 70-100-2010 Clostridioides Difficile Atcc 9689 = Dsm 1296 
2025-10-21 | PXD069714 |
ProteomicsAnalysis of the structure of the MTA1 complex using chemical cross-linking mass spectrometry
Analysis of the structure of the MTA1 complex using chemical cross-linking mass spectrometry
ORGANISM(S): Tetrahymena Thermophila Sb210 
2022-11-30 | PXD038459 |
ProteomicsHigh-resolution spatially resolved proteomics of complex tissues based on microfluidics and transfer learning
We develop a parallel flow projection and transfer learning-based spatial proteomics framework that combines microfluidics and a deep neutral network.
ORGANISM(S): Homo Sapiens Rattus Norvegicus Mus Musculus 
2025-01-15 | PXD045687 |
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