Liu Xiao X - OmicsDI

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Unknown (6961)
Proteomics (247)
Transcriptomics (61)
Metabolomics (32)
Genomics (15)

Organisms

Homo sapiens (117)
Mus musculus (48)
Rattus norvegicus (8)
Arabidopsis thaliana (5)
Sus scrofa (4)
Severe acute respiratory syndrome coronavirus 2 (4)
Escherichia coli (3)
Capra hircus (2)
Bos taurus (2)
Rattus rattus (2)
Riemerella anatipestifer RA-YM (2)
Staphylococcus aureus (2)
Brassica oleracea (1)
Cordyceps militaris (1)
Paralichthys olivaceus (1)
Bemisia tabaci (1)
Macaca mulatta (1)
Oryza sativa Indica Group (1)
Macaca fascicularis (1)
Streptococcus suis (1)
Oryza sativa Japonica Group (1)
Plasmodium falciparum (1)
Bos indicus (1)
Cervus nippon (1)
Drosophila melanogaster (1)
Fragaria vesca subsp. vesca (1)
Ganoderma lingzhi (1)
Haemaphysalis longicornis (1)
Macaca fascicularis fascicularis (1)
Oryctolagus cuniculus (1)

Repository

iProX (132)
pride (109)
biostudies-arrayexpress (69)
MetaboLights (29)
EGA (7)
MassIVE (5)
GNPS (3)
PAXDB (1)

Tissue

Cell culture (20)
Blood serum (7)
Liver (7)
Brain (5)
Epithelial cell (5)
Heart (4)
Leaf (4)
Permanent cell line cell (4)
Pupal wing (4)
Skin (4)
Testis (4)
Blood plasma (3)
Kidney (3)
Plant cell (3)
Stem cell (3)
Bone marrow (2)
Embryo (2)
Hepatocyte (2)
Keratinocyte (2)
Spleen (2)
B cell (1)
Blood (1)
Blood cell (1)
Brown adipose tissue (1)
Cell suspension culture (1)
Colonic mucosa (1)
Early embryonic cell (1)
Embryonic stem cell (1)
HeLa cell (1)
Sertoli cell (1)

Disease

Disease free (7)
Wounds and Injuries (4)
Alzheimer's disease (2)
Cardiovascular system disease (2)
Acute leukemia (1)
Ankylosing spondylitis (1)
Bacterial infectious disease (1)
Brain cancer (1)
Brain ischemia (1)
Breast abscess (1)
Breast cancer (1)
Colon cancer (1)
Enteritis (1)
Hepatocellular carcinoma (1)
Lung cancer (1)
Male infertility (1)
Nasopharynx carcinoma (1)
Non-small cell lung carcinoma (1)
Severe acute respiratory syndrome (1)
Urinary bladder cancer (1)

Technology Type

Mass Spectrometry (109)
Shotgun proteomics (54)
Mass spectrometry (24)
Bottom-up proteomics (14)
Data-dependent acquisition (13)
Gel-based experiment (11)
Affinity purification coupled with mass spectrometry proteomics (8)
Data-independent acquisition (5)
Proteogenomics (5)
Mass spectrometry assay (4)
SWATH MS (3)
Top-down proteomics (3)
Immunopeptidomics (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
All-ion fragmentation (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
MSE (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (15)
Liquid Chromatography MS - positive - reverse phase (13)
Liquid Chromatography MS - positive - hilic (5)
Orbitrap Fusion Lumos (2)
Q Exactive HF (2)
TripleTOF 6600 (2)
Liquid Chromatography MS - - reverse phase (2)
Xevo G2 QTOF (Waters) (2)
Liquid Chromatography MS - negative - hilic (2)
Illumina NovaSeq X (1)
Illumina NovaSeq 6000 (1)
LTQ Orbitrap Elite (1)
Orbitrap Elite mass spectrometer(Thermo) (1)
Liquid Chromatography MS - negative – rp (1)
Liquid Chromatography MS - positive – rp (1)
GC色Agilent 7890A, Agilent ,LECOChroma TOF PEGASUS HT, LECO (1)
Wates I-Class/XEVO-G2 XS QTOF (1)
Liquid Chromatography MS - alternating – hilic (1)
Liquid Chromatography MS - Negative (LC-MS (Neg)) (1)
Liquid Chromatography MS - Positive (LC-MS (Pos)) (1)
Xevo QTof MS (Waters) (1)
Nuclear Magnetic Resonance (NMR) - (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
LTQ (1)
QSTAR (1)
Thermo Finnigan unknown (1)
Thermo Scientific LTQ (1)

Publication Date

2021 (44)
2023 (44)
2024 (41)
2022 (40)
2020 (32)
2025 (31)
2026 (22)
2014 (21)
2019 (12)
2016 (11)
2015 (10)
2012 (9)
2018 (8)
2017 (7)
2013 (7)
2009 (3)
2011 (2)
2010 (2)
2008 (1)
2006 (1)

UNIPROT ID/AC

1433T_RABIT (1)
2A5B_RABIT (1)
2A5D_RABIT (1)
2A5E_RABIT (1)
2A5G_RABIT (1)
2ABA_RABIT (1)
2ABB_RABIT (1)
3HIDH_RABIT (1)
4F2_RABIT (1)
9986.ENSOCUP00000000042 (1)
9986.ENSOCUP00000000055 (1)
9986.ENSOCUP00000000070 (1)
9986.ENSOCUP00000000109 (1)
9986.ENSOCUP00000000131 (1)
9986.ENSOCUP00000000206 (1)
9986.ENSOCUP00000000207 (1)
9986.ENSOCUP00000000305 (1)
9986.ENSOCUP00000000435 (1)
9986.ENSOCUP00000000441 (1)
9986.ENSOCUP00000000514 (1)
9986.ENSOCUP00000000533 (1)
9986.ENSOCUP00000000568 (1)
9986.ENSOCUP00000000651 (1)
9986.ENSOCUP00000000725 (1)
9986.ENSOCUP00000000758 (1)
9986.ENSOCUP00000000909 (1)
9986.ENSOCUP00000000919 (1)
9986.ENSOCUP00000000954 (1)
9986.ENSOCUP00000001052 (1)
9986.ENSOCUP00000001101 (1)

CHEBI ID

CHEBI:30769 (11)
CHEBI:16704 (10)
CHEBI:16196 (10)
CHEBI:15756 (10)
CHEBI:16708 (9)
CHEBI:16335 (9)
CHEBI:17895 (9)
CHEBI:28716 (9)
CHEBI:17992 (8)
CHEBI:55328 (8)
CHEBI:28834 (8)
CHEBI:17750 (8)
CHEBI:28875 (8)
CHEBI:17568 (8)
CHEBI:30915 (8)
CHEBI:17154 (8)
CHEBI:17295 (8)
CHEBI:17351 (8)
CHEBI:17368 (8)
CHEBI:30805 (7)
CHEBI:17748 (7)
CHEBI:16359 (7)
CHEBI:48131 (7)
CHEBI:18183 (7)
CHEBI:17509 (7)
CHEBI:16865 (7)
CHEBI:7916 (7)
CHEBI:16027 (7)
CHEBI:16919 (7)
CHEBI:27897 (7)

Metabolite Name

Adenine (7)
Uridine (7)
Hypoxanthine (7)
Uracil (6)
Citric acid (6)
Adenosine (6)
L-Tyrosine (6)
Inosine (6)
Taurine (5)
Deoxycholic acid (5)
Pantothenic acid (5)
Palmitic acid (5)
Oleic acid (5)
L-Glutamine (5)
Azelaic acid (5)
Guanosine (5)
Thymidine (5)
Creatinine (5)
Creatine (5)
L-Phenylalanine (5)
Chenodeoxycholic acid (4)
Dopamine (4)
L-Histidine (4)
Nicotinamide (4)
Xanthosine (4)
L-Arginine (4)
Spermidine (4)
Cytosine (4)
Riboflavin (4)
Linoleic acid (4)

Study type

Transcription profiling by array (30)
RNA-seq of coding RNA (21)
ChIP-seq (7)
Comparative genomic hybridization by array (3)
RNA-seq of non coding RNA (3)
Other (2)
MicroRNA profiling by array (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2025 (1160)
2022 (1005)
2023 (917)
2024 (861)
2021 (737)
2020 (549)
2019 (379)
2018 (292)
2017 (268)
2016 (223)
2026 (164)
2015 (162)
2014 (109)
2012 (66)
2013 (54)
2011 (33)
2010 (19)
2009 (14)
2008 (5)
2007 (5)
2005 (3)
2006 (2)
2001 (2)
2003 (1)

Lab affiliation

Laboratory of Microbiology Oceanography, State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, State Key Laboratory of Ocean Engineering, Shanghai Jiao Tong University, School of Oceanography, Shanghai JiaoTong University (4)
Biological Science Research Center, Southwest University, Chongqing, 400715, China (3)
State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan,Hubei 430062, China (3)
Affiliation of Qiutao Xu: State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Agriculture, Guangxi University, Nanning 530004, China (2)
Center for Stem Cell Biology and Tissue Engineering, Key Laboratory for Stem Cells and Tissue Engineering, Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, China. (2)
Department of Biochemistry and Structural Biology and Center for Innovative Drug Discovery School of Medicine, University of Texas Health Science Center at San Antonio, 7703 Floyd Curl Drive, San Antonio, TX 78229, United States (2)
Department of Clinical Laboratory Medicine, Shanghai Tenth People’s Hospital of Tongji University, Shanghai, 200072, China (2)
Institute of Dermatology, Chinese Academy of Medical Sciences and Peking Union Medical College, 210042 Nanjing, China. (2)
Institute of Translational Medicine, Zhejiang University School of Medicine, Zhejiang University (2)
Shanghai Institute of Materia Medica, Chinese Academy of Sciences (2)
State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic & Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, China (2)
Biological Science Research Center, Southwest University, Chongqing, 400715, China. (1)
CAS Key Laboratory of Separation Sciences for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China (1)
CAS Key Laboratory of Tropical Marine Bio-resources and Ecology and Guangdong Provincial Key Laboratory of Applied Marine Biology, South China Sea Institute of Oceanology, Chinese Academy of Science. Guangzhou, China (1)
Center for Proteomics & Artificial Intelligence Center for Clinical Mass Spectrometry Allegheny Health Network Cancer Institute 100 S Jackson Ave., Pittsburgh, PA 15202 (1)
Center for Proteomics & Artificial Intelligence, Allegheny Health Network Cancer Institute, Pittsburgh, PA 15202, USA (1)
Center of Growth, Metabolism and Aging, Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, 610064, China (1)
Children's hospitall of Chongqing medical university China (1)
College of Agriculture, Nanjing Agricultural University, Nanjing, China (1)
College of Life Sciences, Hunan Normal University (1)
College of Pharmacy, Jinan University, Guangzhou 510632, P. R. China (1)
Department of Cancer Biology, Dana-Farber Cancer Institute Department of Cell Biology, Harvard Medical School (1)
Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA. Department of Cell Biology, Harvard Medical School, Boston, MA, USA. (1)
Department of Cardiology, The Second Xiangya Hospital, Central South University, Changsha, Hunan 410011, China. (1)
Department of Cell Biology, School of Basic Medical Sciences, Southern Medical University, Guangzhou, Guangdong 510515, China (1)
Department of Endocrinology, Endocrinology Research Center, Xiangya Hospital of Central South University, 87# Xiangya Road, Changsha, Hunan 410008, PR China (1)
Department of Fisheries, College of Animal Science and Technology, Hunan agriculture university (1)
Department of Health Management Center, Qilu Hospital, Cheeloo College of Medicine，Shandong University (1)
Department of Laboratory Medicine & Central Laboratory, Southern Medical University Affiliated Fengxian Hospital, China. (1)
Department of Pathogen Biology, School of Clinical and Basic Medical Sciences, Shandong First Medical University & Shandong Academy of Medical Sciences (1)

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Transcription profiling of mouse mammary gland of Brca and p53 mutants to identifu Brca1 regulated X-linked genes

We compared the expression levels of X-linked genes in the mammary glands of Brca1ï„11/ï„11p53+/- mutant and control (p53+/-) mice at three different stages of the mammary cycle: virgin, pregnant day 16.5, and lactation day 1, using a cDNA microarray. In about 690 X-linked genes that are expresse...

ORGANISM(S): Mus musculus

2008-06-14 | E-GEOD-5861 | biostudies-arrayexpress

Tracheophyte of Xiao Hinggan Ling in China: an updated checklist.

Not available

S-EPMC6477862 | biostudies-literature

Correlative single-cell hard X-ray computed tomography and X-ray fluorescence imaging.

Not available

S-EPMC10917812 | biostudies-literature

Description of two new species of Tonsilla Wang & Yin, 1992 with an updated key to species (Araneae, Agelenidae).

Not available

S-EPMC7340641 | biostudies-literature

Pu-erh tea and theabrownin ameliorate metabolic syndrome in mice via potential microbiota-gut-liver-brain interactions

Metabolic syndrome (MS) is a common metabolic disorder characterized by obesity, insulin resistance, cardiovascular disease and gut microbiota dysbiosis. Pu-erh tea and its ingredient theabrownin have known functions on the reduction of body weight gain and fat accumulation. However, few studies sys...

2024-09-25 | MTBLS2594 | MetaboLights

Overexpression of kallikrein gene 10 is a biomarker for predicting poor prognosis in gastric cancer.

Not available

S-EPMC3882418 | biostudies-literature

Network pharmacology and bioinformatics approach to unravel the mechanism of Xiao-chai-hu-tang herbal formula in tinnitus treatment.

Not available

S-EPMC11417242 | biostudies-literature

Qin-Qiao-Xiao-Du formula alleviate influenza virus infectious pneumonia through regulation gut microbiota and metabolomics.

Not available

S-EPMC9614278 | biostudies-literature

Efficacy and Safety of Chinese Herbal Medicine Xiao Yao San in Functional Gastrointestinal Disorders: A meta-Analysis and Trial Sequential Analysis of Randomized Controlled Trials.

Not available