Liu Xue X - OmicsDI

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Unknown (3838)
Proteomics (147)
Metabolomics (32)
Transcriptomics (21)
Genomics (13)
Other (1)

Organisms

Homo sapiens (68)
Andropogon gerardi (61)
Bacteria (61)
Canis lupus familiaris (61)
Cnidaria (61)
Ensifer adhaerens (61)
Fasciola (61)
Mus musculus (22)
Arabidopsis thaliana (3)
Drosophila melanogaster (2)
Anser cygnoides (2)
Babesia microti (2)
Haemaphysalis longicornis (2)
uncultured bacterium (1)
Saccharomyces cerevisiae (1)
Aeromonas veronii (1)
Bos taurus (1)
Cancer (1)
Escherichia coli (1)
Macaca fascicularis fascicularis (1)
Mus (1)
Oryza sativa (1)
Ovis aries (1)
Pseudomonas aeruginosa (1)
Pyrus x bretschneideri (1)
Rattus rattus (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Shewanella oneidensis MR-1 (1)
Trichuris sp. ex Homo sapiens JP-2011 (1)

Organisms

Sus scrofa (1)

Repository

iProX (81)
pride (61)
MetaboLights (30)
biostudies-arrayexpress (22)
EGA (11)
MassIVE (4)
GNPS (2)
GPMDB (1)
PAXDB (1)
ENA (1)

Tissue

Cell culture (22)
Epithelial cell (6)
Brain (5)
Liver (5)
Lung (5)
Testis (4)
Blood cell (2)
Blood plasma (2)
Heart (2)
Kidney (2)
Leaf (2)
Permanent cell line cell (2)
Adipocyte (1)
Blood serum (1)
Colon (1)
Esophageal epithelium (1)
Hippocampus (1)
Intervertebral disc (1)
Neural cell (1)
Pericyte cell (1)
Pituitary gland (1)
Plant cell (1)
Prostate adenocarcinoma cell (1)
Prostate neuroendocrine cell (1)
Salivary gland (1)
Seedling (1)
Sertoli cell (1)
Sperm (1)
Stem cell (1)
Thyroid gland (1)

Disease

Acute leukemia (2)
Breast cancer (2)
Disease free (2)
Non-small cell lung carcinoma (2)
Not Available (1)
Esophagus squamous cell carcinoma (1)
Laryngeal squamous cell carcinoma (1)
Oligospermia (1)
Prostate adenocarcinoma (1)
Prostate neuroendocrine neoplasm (1)
Thyroid cancer (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (61)
Shotgun proteomics (28)
Mass spectrometry (27)
Bottom-up proteomics (13)
Affinity purification coupled with mass spectrometry proteomics (5)
Data-dependent acquisition (5)
Data-independent acquisition (4)
Top-down proteomics (4)
SWATH MS (3)
Illumina HiSeq 2000, ILLUMINA (2)
Mass spectrometry assay (2)
Gel-based experiment (2)
NMR spectroscopy (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
DiaPASEF (1)
Mass spectrometry imaging (1)
SRM/MRM (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (13)
Liquid Chromatography MS - negative - reverse phase (12)
Liquid Chromatography MS - positive - hilic (3)
Q Exactive HF (2)
TripleTOF 6600 (2)
6530 Q-TOF LC/MS (Agilent) (2)
Gas Chromatography MS - Positive (GC-MS (Positive)) (2)
Liquid Chromatography MS - negative - hilic (2)
Instrument (1)
LTQ Orbitrap Elite (1)
Q Exactive (1)
Quattro micro API (Waters) (1)
Liquid Chromatography MS - negative – rp (1)
Liquid Chromatography MS - positive – rp (1)
Wates I-Class/XEVO-G2 XS QTOF (1)
Agilent 7890 (1)
Agilent 5975E GC/MSD (Agilent) (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Gas Chromatography MS - positive (1)
Bruker (1)
Xevo G2 QTOF (Waters) (1)
API 4000 QTRAP (AB Sciex) (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative - HILIC (1)

Publication Date

2024 (24)
2022 (24)
2023 (23)
2020 (22)
2021 (21)
2026 (19)
2025 (17)
2019 (13)
2014 (11)
2018 (7)
2017 (6)
2015 (5)
2016 (3)
2013 (2)
2012 (2)
2010 (1)
2008 (1)

UNIPROT ID/AC

1FEH1_WHEAT (1)
4565.EPlTAEP00000010002 (1)
4565.EPlTAEP00000010027 (1)
4565.EPlTAEP00000010105 (1)
4565.EPlTAEP00000010109 (1)
4565.EPlTAEP00000010115 (1)
4565.Traes_1AL_00485097A.2 (1)
4565.Traes_1AL_00744EBC6.2 (1)
4565.Traes_1AL_0121566F8.1 (1)
4565.Traes_1AL_013C8AF6B1.1 (1)
4565.Traes_1AL_014F29DA6.1 (1)
4565.Traes_1AL_015BAE72C.1 (1)
4565.Traes_1AL_01806281A.1 (1)
4565.Traes_1AL_0226AAD07.1 (1)
4565.Traes_1AL_034B63223.1 (1)
4565.Traes_1AL_036E330F0.1 (1)
4565.Traes_1AL_03D275069.1 (1)
4565.Traes_1AL_0458C8353.1 (1)
4565.Traes_1AL_04A4521BB.2 (1)
4565.Traes_1AL_04EA15F57.1 (1)
4565.Traes_1AL_051FE2815.1 (1)
4565.Traes_1AL_087978D78.1 (1)
4565.Traes_1AL_08A2F5FA4.1 (1)
4565.Traes_1AL_08A7811E1.3 (1)
4565.Traes_1AL_0912DED70.1 (1)
4565.Traes_1AL_093513BF1.1 (1)
4565.Traes_1AL_09486AD47.1 (1)
4565.Traes_1AL_0A1043127.1 (1)
4565.Traes_1AL_0A5A0E0D3.1 (1)
4565.Traes_1AL_0A7711D82.1 (1)

CHEBI ID

CHEBI:16704 (11)
CHEBI:17368 (11)
CHEBI:16708 (10)
CHEBI:16750 (10)
CHEBI:17895 (10)
CHEBI:17596 (10)
CHEBI:30769 (10)
CHEBI:28875 (9)
CHEBI:15741 (9)
CHEBI:17620 (9)
CHEBI:16235 (9)
CHEBI:16335 (9)
CHEBI:55328 (9)
CHEBI:27897 (9)
CHEBI:15354 (9)
CHEBI:17351 (9)
CHEBI:17521 (8)
CHEBI:16040 (8)
CHEBI:22652 (8)
CHEBI:16610 (8)
CHEBI:17154 (8)
CHEBI:16196 (8)
CHEBI:17568 (8)
CHEBI:7916 (8)
CHEBI:15891 (8)
CHEBI:15843 (8)
CHEBI:17295 (8)
CHEBI:15756 (8)
CHEBI:16828 (8)
CHEBI:27432 (8)

Metabolite Name

Adenine (9)
Hypoxanthine (8)
Adenosine (7)
Taurine (6)
Guanine (6)
Guanosine (6)
Thymidine (6)
Uridine (6)
Sucrose (6)
L-Tyrosine (6)
Uracil (5)
7-Methylguanine (5)
L-Arginine (5)
Arachidonic acid (5)
Citric acid (5)
Spermidine (5)
Uric acid (5)
Cytidine (5)
L-Phenylalanine (5)
Inosine (5)
Galactitol (4)
Ferulic acid (4)
Indoleacetaldehyde (4)
16-Hydroxy hexadecanoic acid (4)
Pantothenol (4)
Syringic acid (4)
L-Proline (4)
4-Pyridoxic acid (4)
Adenosine monophosphate (4)
Kynurenic acid (4)

First Public Date

2022 (1)

Study type

Transcription profiling by array (7)
RNA-seq of coding RNA (6)
RNA-seq of non coding RNA (3)
Comparative genomic hybridization by array (2)
Unknown experiment type (1)
ChIP-chip by tiling array (1)
Other (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2025 (735)
2022 (536)
2023 (523)
2024 (489)
2021 (411)
2020 (291)
2019 (205)
2018 (139)
2017 (117)
2016 (89)
2026 (88)
2014 (69)
2015 (62)
2013 (35)
2012 (24)
2011 (12)
2010 (11)
2008 (9)
2009 (4)
2006 (4)
2007 (3)
2002 (2)
2004 (1)
2001 (1)

Lab affiliation

Department of Clinical Laboratory, Shanghai Tenth People’s Hospital of Tongji University, Shanghai, 200072, China (3)
Department of Hematology, Tongji Hospital, Frontier Science Center for Stem Cell Research, Shanghai Key Laboratory of Signaling and Disease Research, School of Life Sciences and Technology, Tongji University, Shanghai, 200092, China (2)
Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops, Key Laboratory of Plant Functional Genomics of the Ministry of Education, Yangzhou University, Yangzhou 225009, China (2)
School of Life Sciences, Westlake University, Hangzhou, Zhejiang Province, China (2)
Sichuan University (2)
1. College of Veterinary Medicine, Northwest Agriculture and Forestry University, Yangling 712100, Shaanxi, China; 2. Key Laboratory of Animal Biotechnology, Ministry of Agriculture, Northwest A&F University, Yangling 712100, Shaanxi, China (1)
Air Force Medical University (1)
BGI-Shenzhen,China (1)
Beijing proteome research center (1)
Bioheat and mass transfer laboratory, Med-X Research Institute, Shanghai Jiao Tong University (1)
Cancer Stem Cell and Translation Medicine Lab, Innovative Cancer Drug Research and Development Engineering Center of Liaoning Province, Department of Oncology, Shengjing Hospital of China Medical University, Shenyang, 110004, China (1)
Center of Reproductive Medicine, Nanjing Jinling Hospital, Clinical School of Medical College, Nanjing University, China. (1)
Changchun Veterinary Research Institute (1)
College of Animal Science and Technology, Key Laboratory of Animal Nutrition and Feed Science of Jilin Province, Key Laboratory of Animal Production Product Quality and Security Ministry of Education, Jilin Agricultural University, China (1)
Department of Biology, Institute of Molecular Systems Biology, ETH, Zurich, Switzerland (1)
Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, Guangdong, China (1)
Department of Clinical Laboratory, National Center for Respiratory Medicine, National Clinical Research Center for Respiratory Disease, State Key Laboratory of Respiratory Disease, Guangzhou Institute of Respiratory Health, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou, Guangdong 510120, China. (1)
Department of Immunology, School of Basic Medical Sciences, Peking University (1)
Department of Medicine & Pharmacy Research Center, Binzhou Medical University, Yantai, Shandong, P. R. China, 264003 (1)
Department of Neurology, Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou 310009, China (1)
Department of Plastic Surgery, Affiliated Friendship Plastic Surgery Hospital of Nanjing Medical University, Nanjing Medical University, Nanjing, China (1)
Florence and Herbert Irving Endowed Professor of Medicine Columbia University Irving Medical Center (1)
Fudan University Shanghai Cancer Center, Department of Oncology, Shanghai Medical College, Fudan University, Shanghai, 200032, China. International Co-operation Laboratory on Signal Transduction, Eastern Hepatobiliary Surgery Institute/National Center for Liver Cancer, Naval Medical University. 225 Changhai Road, 200438 Shanghai, China. (1)
Georgia State University (1)
Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou, China 510120. (1)
Hangzhou Medical College (1)
Hebei normal university,China (1)
Henan Institute of Medical and Pharmaceutical Sciences, Zhengzhou University (1)
Hotchkiss Brain Institute and Department of Clinical Neurosciences, University of Calgary, Calgary, Alberta, Canada Departments of Biochemistry and Molecular Biology, and Physiology and Pharmacology, and McCaig Institute for Bone and Joint Health, University of Calgary, Calgary, Canada (1)
Institute of Basic Medical Sciences Chinese Academy of Medical Sciences (1)

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The Relative Content and Distribution of Absorbed Volatile Organic Compounds in Rats Administered Asari Radix et Rhizoma Are Different between Powder- and Decoction-Treated Groups

Asari Radix et Rhizoma (ARR) is an important traditional Chinese medicine. Volatile organic compounds (VOCs) are the main active constituents of ARR. Research on the metabolite profile of VOCs and the difference of absorbed constituents in vivo after an administration of ARR decoction and powder wil...

2021-02-01 | MTBLS2053 | MetaboLights

Global involvement of lysine crotonylation in protein modification and transcription regulation in rice

Lysine crotonylation (Kcr) is a newly discovered post-translational modification (PTM) existing in mammals. A global crotonylome analysis was undertaken in rice (Oryza sativa L. japonica) using high accuracy nano-LC-MS/MS in combination with crotonylated peptide enrichment. A total of 1,265 lysine c...

ORGANISM(S): Oryza sativa (Rice)

2018-09-20 | PXD010376 | Pride

Network pharmacology and molecular docking to explore the mechanism of Sheng Xue Bao mixture against iron deficiency anemia.

Not available

S-EPMC10508396 | biostudies-literature

Multimethodological and multiscale investigation of the therapeutic mechanism of Qian Ji Sheng Xue Pian in treating primary immune thrombocytopenia.

Not available

S-EPMC12797464 | biostudies-literature

Global Transcriptome Analyses of Mammalian Terminal Erythroid Differentiation

Purpose:The purpose of this study is to create unbiased, stage-specific transcriptomes by RNA-seq analyses of pure populations of both murine and human erythroblasts at distinct developmental stages. Methods: Recently developed FACS-based methods (Chen et al, PNAS, Liu et al, Blood, Hu et al Blood) ...

ORGANISM(S): Mus musculus

2014-03-19 | E-GEOD-53983 | biostudies-arrayexpress

RNA-seq analysis of differentiating human erythroblasts

Human erythroblasts purified from cord blood were cultured in vitro and FACS-sorted into five highly purified populations representing distinct differentiation stages: proerythroblasts, early basophilic erythroblasts, late basophilic erythroblasts, polychromatophilic erythroblasts, and orthochromat...

ORGANISM(S): Homo sapiens

2013-12-25 | E-GEOD-53635 | biostudies-arrayexpress

The analgesic effects of Yu-Xue-Bi tablet (YXB) on mice with inflammatory pain by regulating LXA4-FPR2-TRPA1 pathway.

Not available

S-EPMC11302111 | biostudies-literature

LGR4 modulates breast cancer initiation, metastasis, and cancer stem cells.

Not available

S-EPMC5901378 | biostudies-literature

Integrating Network Pharmacology, Transcriptome and Artificial Intelligence for Investigating Into the Effect and Mechanism of Ning Fei Ping Xue Decoction Against the Acute Respiratory Distress Syndrome.

Not available

S-EPMC8595141 | biostudies-literature

Intestinal Gastrin/CCKBR (Cholecystokinin B Receptor) Ameliorates Salt-Sensitive Hypertension by Inhibiting Intestinal Na⁺/H⁺ Exchanger 3 Activity Through a PKC (Protein Kinase C)-Mediated NHERF1 and NHERF2 Pathway.