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MetabolomicsIntegrated microbiome-metabolome-genome axis data of Laiwu and Lulai pigs
Excessive fat deposition can trigger metabolic diseases, and it is crucial to identify factors that can break the link between fat deposition and metabolic diseases. Healthy obese Laiwu pigs (LW) are high in fat content but resistant to metabolic diseases. In this study, we compared the fecal microb...
2023-04-20 | MTBLS3977 | MetaboLights
TranscriptomicsChIP-chip of HA-tagged Lsr2 in Mycobacterium tuberculosis and Mycobacterium smegmatis
Bacterial nucleoid-associated proteins play important roles in chromosome organization and global gene regulation. We find that Lsr2 of Mycobacterium tuberculosis is a novel nucleoid-associated protein that specifically binds AT-rich regions of the genome, including regions encoding major virulence ...
ORGANISM(S): Mycobacterium smegmatis 
2010-06-19 | E-GEOD-18652 | biostudies-arrayexpress
TranscriptomicsCNV analysis of iPS cell lines and H2A.X knockout ES cell
It is well-known that embryonic stem cells (ESC) are much more sensitive to replication-induced stress than differentiated cells but the underpinning mechanisms are largely unknown. H2A.X, a minor variant of H2A, constitutes only 1-10% of the mammalian genome. H2A.X plays a well-known for role in t...
ORGANISM(S): Mus musculus 
2014-09-07 | E-GEOD-42266 | biostudies-arrayexpress
UnknownExternal validation of a deep learning detection system for glaucomatous optic neuropathy: a real-world multicentre study.
Not available
S-EPMC10698045 | biostudies-literature
ProteomicsEVA1A responds to endoplasmic reticulum stress to regulate renal fibrosis by promoting TGF-β signaling pathway
LC-MS results of EVA1A and TGFBR2 pulldown counterpart in 293T cells
ORGANISM(S): Homo Sapiens 
2025-12-09 | PXD071738 |
ProteomicsThe proteome and phosphorylproteome of human early erythropoiesis
In order to revealed the multiple protein functional modules and kinases networks of human early erythropoiesis. We isolated the CD34+ cells drived from Human umbilical cord blood samples and induced to undergo erythropoiesis in vitro. Then, the cultured erythroid cells were sorted with FACS and sam...
ORGANISM(S): Homo Sapiens 
2022-08-03 | PXD035785 |
ProteomicsYbfA regulates the sensitivity of Escherichia coli K12 to plantaricin BM-1 via the BasS/BasR two-component regulatory system
YbfA regulates the sensitivity of Escherichia coli K12 to plantaricin BM-1 via the BasS/BasR two-component regulatory system
ORGANISM(S): Escherichia Coli 
2021-01-31 | PXD023898 |
ProteomicsBasS/BasR two-component system affects the sensitivity of Escherichia coli to class IIa bacteriocins by regulating the tricarboxylic acid cycle
The BasS / BasR two-component system in E. coli affects the sensitivity of E. coli to class IIa bacteriocins by regulating tricarboxylic acid cycle related proteins
ORGANISM(S): Escherichia Coli 
2022-01-06 | PXD030761 |
ProteomicsCRISPR screening reveals that RNA helicase DDX41 triggers ribosome biogenesis and cancer progression through R-loop-mediated RPL/RPS transcription
The RNA helicase DDX41 is a DEAD-box helicase that is well known as a virus sensor in dendritic cells and a tumor suppressor that is frequently mutated in myeloid neoplasms. However, the functions and relevance of DDX41 in solid tumors remain largely unexplored. In this study, through in vivo CRISPR...
ORGANISM(S): Homo Sapiens 
2024-12-23 | PXD059178 |
ProteomicsResveratrol and N-acetylcystei reduce hepatic steatosis but enhance initiation and progression of hepatocellular carcinoma
we performed longitudinal, unbiased, quantitative proteomics using liver tissues from RES-treated and vehicle-treated DEN/HFD mice
ORGANISM(S): Mus Musculus 
PXD056132 |
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