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TranscriptomicsAdaptation of E. histolytica to long term glucose starvation
We have performed a DNA microarray analysis of gene expression in trophozoites which were adapted to grow in a media depleted from glucose for one month and on glucose-starved trophozoites which were recovered with the addition of glucose.
ORGANISM(S): Entamoeba histolytica 
2012-07-01 | E-MTAB-1187 | biostudies-arrayexpress
ProteomicsAG3C glucose starvation time course
This data set consists of a long term glucose starvation time course of E. coli grown in minimal media for up to two weeks. Unlike previous studies of long term starvation,Our study focuses on the physiological response of E. Coli in stationary phase as a result of being starved for glucose, not on ...
ORGANISM(S): Escherichia coli 
2015-08-24 | PXD002140 | Pride
Bacterial physiology Long term glucose starvation Multi-omic dataset 
TranscriptomicsRNA-seq analysis of MG1655 Escherichia coli (Wild-type, and mutants lacking the glucose metabolism regulator TmaR) experiencing short- & long-term N starvation and following treatment with rifampicin during long-term N starvation in Gutnick minimal media
RNA-seq was carried out to compare the transcriptomes of wild-type MG1655 E coli with mutants lacking the glucose metabolism regulator TmaR , in bacteria that had been exposed to short-term (3hr) and long-term (24hr) nitrogen starvation in Gutnick minimal media. A rifampicin-chase experiment was per...
ORGANISM(S): Escherichia coli K-12 
2025-09-23 | E-MTAB-15469 | biostudies-arrayexpress
ProteomicsIdentification of phosphorylation sites and binding proteins of Saccharomyces cerevisiae Tda1
Tda1 in Saccharomyces cerevisiae is a protein kinase that is activated in response to glucose starvation. However, how it is activated has not been investigated for a long time. In this analysis, yeast cells were grown in high (2%) or low (0.05%) glucose medium, and the lysate were subjected to immu...
ORGANISM(S): Saccharomyces Cerevisiae (baker's Yeast) 
2025-03-24 | PXD060707 | JPOST Repository
GenomicsRNA-seq analysis of MG1655 Escherichia coli (Wild-type, and mutants lacking the glucose metabolism regulator TmaR) experiencing short- & long-term N starvation and following treatment with rifampicin during long-term N starvation in Gutnick minimal media
RNA-seq analysis of MG1655 Escherichia coli (Wild-type, and mutants lacking the glucose metabolism regulator TmaR) experiencing short- & long-term N starvation and following treatment with rifampicin during long-term N starvation in Gutnick minimal media
PRJEB95820 | ENA
TranscriptomicsRNA-seq analysis of BW25113 Escherichia coli (Wild-type, and mutants lacking the glucose metabolism regulator TmaR or the RNA Chaperone Hfq) experiencing long-term nitrogen starvation in Gutnick minimal media
RNA-seq was carried out to compare the transcriptomes of wild-type BW25113 E coli with mutants lacking either the glucose metabolism regulator TmaR or the ubiquitous RNA chaperone Hfq, in bacteria that had been exposed to long-term (24hr) nitrogen starvation in Gutnick minimal media. All strains als...
ORGANISM(S): Escherichia coli K-12 
2025-12-31 | E-MTAB-14999 | biostudies-arrayexpress
TranscriptomicsHomeostatic adjustment and metabolic remodeling in glucose-limited yeast cultures
This SuperSeries is composed of the following subset Series: GSE3205: Homeostatic Adjustment and Metabolic Remodeling in Glucose-limited Yeast Cultures Time Course 1 GSE3206: Homeostatic Adjustment and Metabolic Remodeling in Glucose-limited Yeast Cultures Time Course 2 Abstract: We studied the phy...
ORGANISM(S): Saccharomyces cerevisiae 
2006-03-07 | E-GEOD-4398 | biostudies-arrayexpress
TranscriptomicsLactic acidosis triggers starvation response with distinct metabolic profiles
[1] Lactic acidosis time course: MCF7 cells were exposed to lactic acidosis for different length of time. We used microarrays to examine the genomic programs of cells incubated under lactic acidosis for different length of time [2] Metabolic profiling: MCF7 cells were exposed to control condition, ...
ORGANISM(S): Homo sapiens 
2010-09-27 | E-GEOD-19123 | biostudies-arrayexpress
TranscriptomicsTranscription analysis of E. coli processed at persistent and decreasing glucose limitation in a fed-batch cultivation
A time series of whole-genome transcription profiling of E. coli K-12 W3110 was performed to study the dynamic physiological response of E. coli K-12 W3110 to limited carbon conditions. cDNA from eight time intervals after glucose limitation, representing different stages of glucose depletion, along...
ORGANISM(S): Escherichia coli W3110 
2010-05-19 | E-GEOD-10307 | biostudies-arrayexpress
TranscriptomicsHomeostatic Adjustment and Metabolic Remodeling in Glucose-limited Yeast Cultures Time Course 2
Time course of batch growth. Reference (channel 1) was a culture grown in MD medium with 2.4 g/L glucose, with 5 slpm air-flow, stirring at 400 rpm and a constant 300C temperature, dilution 0.25 volumes/hour. The experimental (channel 2) samples were grown in batch for the indicated time. Groups ...
ORGANISM(S): Saccharomyces cerevisiae 
2005-08-26 | E-GEOD-3206 | biostudies-arrayexpress
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