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UnknownLarge scale screening for known fusion genes in cancer cell lines
Not available
ORGANISM(S): Homo sapiens 
S-ECPF-GEOD-24737 | biostudies-other
UnknownCMScaller: an R package for consensus molecular subtyping of colorectal cancer pre-clinical models.
Not available
S-EPMC5709354 | biostudies-literature
TranscriptomicsLarge scale screening for fusion genes in sarcoma patient samples
We have utilized our custom array GPL11054 to screen a set of sarcoma patient samples for fusion genes One negative control was included in the study. We wanted to investigate the power of our fusion-gene array GPL11054 as a means for fusion gene detection in a series of sarcoma patient samples from...
ORGANISM(S): Homo sapiens 
2013-10-23 | E-GEOD-43632 | biostudies-arrayexpress
TranscriptomicsLarge scale screening for known fusion genes in cancer cell lines
We have utilized a version 2.0 of our Fusion gene microarray (version 1.0 described by PMID: 19152679 and GEO, GPL8078) to screen cancer cell lines for known fusion genes We assembled a comprehensive database of published fusion genes, including those which have been reported only in individual stud...
ORGANISM(S): Homo sapiens 
2011-02-10 | E-GEOD-24737 | biostudies-arrayexpress
UnknownA robust internal control for high-precision DNA methylation analyses by droplet digital PCR.
Not available
S-EPMC5822558 | biostudies-literature
UnknownRelative contribution of clinicopathological variables, genomic markers, transcriptomic subtyping and microenvironment features for outcome prediction in stage II/III colorectal cancer.
Not available
S-EPMC6857614 | biostudies-literature
UnknownDigital image analysis of multiplex fluorescence IHC in colorectal cancer recognizes the prognostic value of CDX2 and its negative correlation with SOX2.
Not available
S-EPMC6917572 | biostudies-literature
TranscriptomicsTranscription profiling by array of primary prostate cancer biopsies wutg different ETS transcription factor rearrangements
This work was conducted to identify shared and specific target genes of different ETS transcription factor rearrangements in prostate cancer. Potential target genes were identified by differential gene expression analysis of primary tumor samples with ETS rearrangements, and validated by ETS silenci...
ORGANISM(S): Homo sapiens 
2014-08-12 | E-GEOD-42954 | biostudies-arrayexpress
UnknownA CpG island hypermethylation profile of primary colorectal carcinomas and colon cancer cell lines.
Not available
S-EPMC526388 | biostudies-literature
UnknownMetastatic heterogeneity of the consensus molecular subtypes of colorectal cancer.
Not available
S-EPMC8280229 | biostudies-literature
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