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Unknown (1383)
Proteomics (39)
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Metabolomics (7)
Models (1)

Organisms

Homo sapiens (26)
Escherichia coli (5)
Arabidopsis thaliana (4)
Mus musculus (2)
Bos taurus (2)
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Nicotiana tabacum (1)
Oryctolagus cuniculus cuniculus (1)
Thermochaetoides thermophila DSM 1495 (1)

Organisms

Homo sapiens (6)

Repository

pride (36)
ENA (10)
biostudies-arrayexpress (9)
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Tissue

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Disease

Amyotrophic lateral sclerosis (3)
Severe acute respiratory syndrome (2)
Alzheimer's disease (1)
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Pancreatic carcinoma (1)

Technology Type

Mass Spectrometry (36)
Shotgun proteomics (16)
Chemical cross-linking coupled with mass spectrometry proteomics (13)
Affinity purification coupled with mass spectrometry proteomics (7)
Bottom-up proteomics (6)
Mass spectrometry (5)
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HDMSE (1)

Instrument Platform

Illumina NovaSeq 6000 (3)
Orbitrap Fusion (2)
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2017 (2)
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2010 (1)
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2016 (1)

CHEBI ID

CHEBI:16119 (3)
CHEBI:10642 (2)
CHEBI:14314 (2)
CHEBI:15760 (2)
CHEBI:15978 (2)
CHEBI:16112 (2)
CHEBI:16335 (2)
CHEBI:16708 (2)
CHEBI:16811 (2)
CHEBI:16865 (2)
CHEBI:16914 (2)
CHEBI:16958 (2)
CHEBI:17151 (2)
CHEBI:17475 (2)
CHEBI:17716 (2)
CHEBI:18186 (2)
CHEBI:18257|CHEBI:18211 (2)
CHEBI:22653 (2)
CHEBI:24266 (2)
CHEBI:25094 (2)
CHEBI:25627 (2)
CHEBI:25633 (2)
CHEBI:26546 (2)
CHEBI:27897 (2)
CHEBI:28053 (2)
CHEBI:28300 (2)
CHEBI:28635 (2)
CHEBI:29016 (2)
CHEBI:30653 (2)
CHEBI:32374 (2)

Metabolite Name

2-Aminoadipate (260) (2)
2-Isopropylmalate (275) (2)
4-Aminobutanoate [GABA] (174) (2)
Adenine (264) (2)
Adenosine (236) (2)
Aminomalonic acid (218) (2)
Beta-Alanine (248) (2)
Gluconate (333) (2)
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Melibiose (361) (2)
Methionine (176) (2)
Octadecadienoic acid (337) (2)
Octadecatrienoic acid (335) (2)
Ornithine|Citrullin (142) (2)
(E)-Ferulic acid (1)
(E)-p-coumaric acid, 4-Hydroxycinnamic acid (1)
1-Monolinolein (1)
1-benzopyrans (1)
1-hydroxy-2-unsubstituted benzenoids (1)
2,2-dimethyl-1-benzopyrans (1)
2-Oxoglutarate (129) (1)
3',5'-cyclic GMP (1)
3-Caffeoy-trans-Quinic acid (345) (1)
3-Caffeoyl-trans-Quinic acid (345) (1)
3-Hydroxytyramine, dopamine (1)
3-hydroxyflavonoids (1)

IsPrivate

False (1)

Submitter Keywords

Manuscript Accepted (1)

First Public Date

2024 (3)
2023 (3)
2026 (1)
2021 (1)
2016 (1)
2014 (1)

Modelling Approach

Constraint-based model (1)

Study type

RNA-seq of coding RNA (5)
Transcription profiling by array (2)
Human - High-throughput sequencing (1)
Comparative genomic hybridization by array (1)

Release Date

2022 (177)
2024 (151)
2025 (144)
2021 (139)
2023 (138)
2020 (120)
2019 (85)
2018 (81)
2017 (65)
2015 (47)
2014 (46)
2016 (42)
2012 (22)
2013 (21)
2011 (21)
2010 (18)
2009 (17)
2026 (11)
2008 (11)
2007 (8)
2006 (6)
2005 (5)
2004 (5)
2003 (4)
2001 (4)
2002 (3)
1999 (1)

Lab affiliation

Department of Neurology, Martin-Luther-University Halle-Wittenberg, Halle (Saale), Germany (5)
Institute for Biochemistry and Biotechnology, Martin Luther University Halle-Wittenberg (2)
Interdisciplinary research center HALOmem, Institute of Biochemistry and Biotechnology, Charles Tanford Protein Center, Martin Luther University Halle-Wittenberg, Halle, Germany (2)
Martin-Luther University Halle-Wittenberg Institute of Pharmacy Department of Pharmaceutical Chemistry & Bioanalytics Charles Tanford Protein Center (2)
Centre for Organismal Studies (COS) Heidelberg Im Neuenheimer Feld 360 69120 Heidelberg Fon +49 6221 54-6286 Fax +49 6221 54-5859 (1)
Department of Cellular Biochemistry Institute for Biochemistry and Biotechnology Martin-Luther-University Halle-Wittenberg Kurt-Mothes-Str. 3 06120 Halle (Saale) (1)
Department of Internal Medicine I, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany. (1)
Department of Pharmaceutical Chemistry & Bioanalytics Center for Structural Mass Spectrometry Institute of Pharmacy Martin Luther University Halle-Wittenberg Kurt-Mothes-Str. 3, Entrance C D-06120 Halle/Saale (1)
Department of Pharmaceutical Chemistry & Bioanalytics AG Sinz Institute of Pharmacy, Center for Structural Mass Spectrometry Martin Luther University Halle-Wittenberg Germany (1)
Department of Pharmaceutical Chemistry & Bioanalytics Institute of Pharmacy Martin-Luther University Halle-Wittenberg Germany (1)
Department of Pharmaceutical Chemistry & Bioanalytics, Institute of Pharmacy, Charles Tanford Protein Center, Martin Luther University Halle-Wittenberg, Kurt-Mothes-Str. 3a, D-06120 Halle (Saale), Germany (1)
Department of Pharmaceutical Chemistry and Bioanalytics Center for Structural Mass Spectrometry Institute of Pharmacy Martin Luther University Halle-Wittenberg (1)
Department of Pharmaceutical Chemistry and Bioanalytics, Institute of Pharmacy, Martin Luther University Halle-Wittenberg, Kurt-Mothes-Str. 3, Halle/Saale D-01620, Germany Center for Structural Mass Spectrometry, Martin Luther University Halle-Wittenberg, Kurt-Mothes-Str. 3, Halle/Saale D-01620, Germany (1)
Institut für Physiologische Chemie, Martin-Luther-Universität Halle-Wittenberg, Hollystr. 1, 06114 Halle (Saale); Germany (1)
Institute for Biochemistry and Molecular Biology University of Hamburg Martin-Luther-King-Platz 6 20146 Hamburg Germany (1)
Institute of Biochemistry and Biotechnology, Martin Luther University Halle-Wittenberg, Kurt-Mothes-Straße 3, 06120, Halle/Saale, Germany Institute of Chemical Biology, National Hellenic Research Foundation, Athens, 11635, Greece (1)
Institute of Biology/ Microbiology, Martin Luther University Halle-Wittenberg, Kurt-14 Mothes-Str. 3, 06120 Halle (Saale), Germany (1)
Institute of Molecular Systems Biology & Department of Health Sciences and Technology, ETH Zurich, Switzerland (1)
Interdisciplinary Research Centre HALOmem, Charles Tanford Protein Centre, Institute for Biochemistry and Biotechnology, Martin Luther University Halle-Wittenberg, Halle, Germany (1)
Interdisciplinary Research Centre HALOmem, Charles Tanford Protein Centre, Institute of Biochemistry and Biotechnology, Martin-Luther University Halle-Wittenberg, Halle, Germany (1)
Interdisciplinary research center HALOmem, Martin Luther University Halle-Wittenberg, Kurt-Moses-Straße-3, 06120 Halle (Saale) (1)
Interdisciplinary research centre HALOmem, Charles Tanford Protein Center, Institute for Biochemistry and Biotechnology, Martin Luther University Halle-Wittenberg, Halle, Germany (1)
Leibniz Institute of Plant Biochemistry; Center for Structural Mass Spectrometry, Institute of Pharmacy, Martin-Luther University Halle-Wittenberg (1)
Martin Luther University (MLU) Institute of Molecular Medicine (IMM) Sect. Molecular Cell Biology (1)
Martin-Luther-Universitaet Halle-Wittenberg, Institute for Biology/Microbiology (1)
Martin-Luther-University Halle-Wittenberg (MLU) Institute of Pharmacy Department of Pharmaceutical Chemistry and Bioanalyitics (1)
Martin-Luther-University, Nat.-Fac. I, Dept. Plant Biochemistry, Weinbergweg 22, 06120 Halle (Saale), Germany (1)
Martin-Luther-Universität Halle-Wittenberg Institut für Biochemie und Biotechnologie Abteilung Pflanzenbiochemie (1)
Prof. Dr. Ralf Benndorf Abteilung für Klinische Pharmazie und Pharmakotherapie Institut für Pharmazie Martin-Luther-Universität Halle-Wittenberg (1)

Tags

xref:PubMed:24336126 (1)
xref:PubMed:38026216 (1)
xref:PubMed:38195466 (1)
xref:PubMed:38129563 (1)
xref:PubMed:36763527 (1)
xref:PubMed:42291242 (1)
xref:EuropePMC:PMC4872089 (1)

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NHS Carbamate Cross-Linkers Provide Complementary XL-MS Restraints via Preferential N-Terminal Targeting

Cross-linking mass spectrometry (XL-MS) has become a valuable tool for investigating the structural morphology and plasticity of proteins. Traditional cross-linkers contain two N-hydroxy succinimide (NHS) esters that mainly react with lysine residues. In this work, we optimized the in-solution react...

ORGANISM(S): Bos taurus (Bovine) Homo sapiens (Human)

2026-03-30 | PXD069252 | Pride

Glycosyltransferase POMGnT1 deficiency affects N-cadherin-mediated cell-cell adhesion

Deficiencies in the protein O-mannose β1,2-N-acetylglucosaminyltransferase 1 (POMGNT1), a glycosyltransferase involved in the elongation of classic O-mannosyl glycans, are mainly associated with muscle-eye-brain disease (MEB), a genetically heterogeneous congenital muscular dystrophy with brain and ...

ORGANISM(S): Homo sapiens (Human)

2021-02-18 | PXD021321 | Pride

Pomgnt1 Pmgt1 Protein o-linked-mannose beta-1 2-n-acetylglucosaminyltransferase 1 Meb Pomgnt1 Mannosylation Muscular dystrophy-dystroglycanopathy Muscle-eye-brain disease Pomgnt1

N,N'-Dicyclo-hexyl-ethyl-enediammonium dichloride.

Not available

S-EPMC2980107 | biostudies-literature

(1,4,7,10-Tetra-aza-cyclo-dodecane-κN,N,N,N)(tetra-oxidomolybdato-κO)copper(II) monohydrate.

Not available

S-EPMC3007245 | biostudies-literature

Graduating nurse students' interest in older people nursing-A cross-sectional survey in six European countries.

Not available

S-EPMC9285737 | biostudies-literature