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ProteomicsLeaf-age specific flood resilience in Arabidopsis thaliana is determined by distinct processes contributing to post-submergence recovery
While the molecular mechanisms mediating submergence tolerance have been extensively studied, those underpinning age-dependent resilience remain poorly characterized. In Arabidopsis thaliana, submergence elicits a leaf-age dependent phenotype in which senescence and death progress across an age grad...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2026-08-14 | PXD067068 | Pride
Arabidopsis thaliana leaf proteome post submergence recovery tmtpro 
ProteomicsQuantitative N-terminome of N-end rule mutant in Arabidopsis
According to the /N-end rule pathway, proteins with basic N-termini are targeted for degradation by the Arabidopsis thaliana E3 ligase, PROTEOLYSIS6 (PRT6). Here, we undertook a quantitative proteomics study of N-end rule mutant prt6, to investigate the impact of this pathway on the etiolated seedli...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2017-10-27 | PXD006450 | Pride
N-terminome Arabidopsis N-end rule mutant etiolated seedlings tmt- labelling tails 
ProteomicsEthylene treated Arabidopsis roots
Flooded plants experience impaired gas diffusion underwater, leading to oxygen deprivation (hypoxia) stress. The volatile plant hormone ethylene is rapidly trapped in submerged plant cells and is instrumental for enhanced metabolic hypoxia acclimation. However, the precise mechanisms underpinning et...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2022-12-19 | PXD031138 | Pride
Arabidopsis root ethylene tmt10 
TranscriptomicsMolecular profiling and gene expression analysis in cutaneous sarcoidosis (CS)
Cutaneous sarcoidosis skin provides relatively non invasive access to granulomatous sarcoidosis tissue. Twenty participants were enrolled: 15 with active CS and 5 healthy volunteers. Microarray analyses comparing non-LS and healthy volunteer skin with LS showed several thousand genes differentially ...
ORGANISM(S): Homo sapiens 
2011-10-12 | E-GEOD-32887 | biostudies-arrayexpress
ProteomicsQuantitative proteomics analysis of the Arg/N-end rule pathway of targeted degradation in Arabidopsis roots
According to the Arg/N-end rule pathway, proteins with basic N-termini are targeted for degradation by the Arabidopsis thaliana E3 ligase, PROTEOLYSIS6 (PRT6). Proteins can also become PRT6 substrates following post-translational arginylation by arginyltransferases ATE1 and 2. Here, we undertook a q...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2015-03-26 | PXD001719 | Pride
Tmt N-end rule Root Tails Quantitative proteomics 
UnknownA splicing factor switch controls hematopoietic lineage specification of pluripotent stem cells
Not available
S-SCDT-EMBOR-2020-50535V1 | biostudies-other
ProteomicsLegionella pneumophila effector LegK3 directly phosphorylates multiple caspases involved in apoptosis signaling, including Caspase-3, Caspase-7, and Caspase-9
Legionella pneumophila effector Legk3 phosphorylates caspase3/7/9 under infection, transfection, or in vitro purification condition
ORGANISM(S): Homo Sapiens 
PXD054358 |
ProteomicsLegionella pneumophila effector LegK3 phosphorylates multiple caspases involved in apoptosis signaling
Legionella pneumophila effector Legk3 phosphorylates caspase3/7/9 under infection, transfection, or in vitro purification
ORGANISM(S): Homo Sapiens 
PXD054088 |
ProteomicsThe interactional proteins with TANGO6 in U251 cells
To investigate the interactional proteins with TANGO6, we conducted MS.
ORGANISM(S): Homo Sapiens 
2024-02-04 | PXD049158 |
ProteomicsDissection of Blood Ecosystem in SARS-CoV-2 Omicron Patients
Here, we systematically profiled clinical phenomes, transcriptomes, proteomes, metabolomes, and immune repertoire of blood cells or plasma in over 1000 specimens from SARS-CoV-2 Omicron patients across multiple disease phases.
ORGANISM(S): Homo Sapiens 
PXD045174 |
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