Ma Yan Y - OmicsDI

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Unknown (3972)
Proteomics (131)
Transcriptomics (30)
Metabolomics (25)
Genomics (9)
Multiomics (3)

Organisms

Homo sapiens (56)
Mus musculus (17)
Streptomyces coelicolor (2)
Bos taurus (2)
Triticum aestivum (2)
Arabidopsis thaliana (2)
Rattus rattus (2)
Rhodopseudomonas palustris (1)
Culex quinquefasciatus (1)
Arachis hypogaea (1)
Gossypium hirsutum (1)
Clostridium acetobutylicum (1)
Zea mays (1)
Mycobacterium tuberculosis (1)
Equus asinus x Equus caballus (1)
human blood metagenome (1)
Fusarium pseudograminearum (1)
Camellia sinensis var. assamica (1)
Rasamsonia (1)
Thermomyces (1)
Aspergillus (1)
Vibrio cholerae O1 biovar El Tor str. N16961 (1)
Ziziphus jujuba var. spinosa (1)
Triticum aestivum subsp. tibeticum (1)
Ailuropoda melanoleuca (1)
Sus scrofa domesticus (1)
Solanum tuberosum (1)
Drosophila melanogaster (1)
Oryctolagus cuniculus (1)
Rattus norvegicus (1)

Repository

pride (63)
iProX (57)
biostudies-arrayexpress (33)
MetaboLights (25)
EGA (7)
MassIVE (5)
PeptideAtlas (3)
jPOST (2)

Tissue

Cell culture (13)
Epithelial cell (7)
Liver (6)
Brain (5)
Hepatocyte (4)
Lung (4)
Others (3)
Cell suspension culture (3)
Leaf (3)
Permanent cell line cell (3)
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Blood serum (2)
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Cytotoxic T-lymphocyte (1)
Rectum (1)
Aorta thoracica (1)
Frontal lobe (1)
Helper T-lymphocyte (1)
Esophageal squamous epithelium (1)
Amygdala (1)
Skeletal muscle fiber (1)
Aorta (1)
Mammary gland (1)
Eye (1)
Hemolymph (1)
Dental pulp cell (1)

Disease

Breast cancer (3)
Gastric adenocarcinoma (2)
Liver cancer (2)
Mastitis (1)
Esophageal cancer (1)
Stomach cancer (1)
Bone cancer (1)
Brain ischemia (1)
Fragile X syndrome (1)
Hepatocellular carcinoma (1)
Mixed disorder as reaction to stress (1)
Type 2 diabetes mellitus (1)
Wounds and Injuries (1)
Colon cancer (1)

Technology Type

Mass Spectrometry (63)
Shotgun proteomics (34)
Mass spectrometry (21)
Bottom-up proteomics (9)
Gel-based experiment (7)
Data-dependent acquisition (7)
Top-down proteomics (3)
NMR spectroscopy (2)
Mass spectrometry assay (2)
Data-independent acquisition (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Illumina HiSeq 2000 (1)
DiaPASEF (1)
HDMSE (1)
SWATH MS (1)
SRM/MRM (1)
Affinity purification coupled with mass spectrometry proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (5)
Liquid Chromatography MS - positive - reverse phase (4)
Liquid Chromatography MS - alternating - hilic (3)
Liquid Chromatography MS - negative - hilic (3)
Liquid Chromatography MS - positive - hilic (3)
Q Exactive (2)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (2)
Gas Chromatography MS - Positive (GC-MS (Positive)) (2)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (2)
Liquid Chromatography MS - (2)
Liquid Chromatography MS - positive (2)
Liquid Chromatography MS - alternating - reverse phase (2)
LTQ Orbitrap Elite (2)
Illumina Genome Analyzer (1)
HiSeq X Ten (1)
Illumina HiSeq 2000 (1)
Orbitrap Elite mass spectrometer(Thermo) (1)
TimsTOF Pro (1)
Orbitrap Fusion Lumos (1)
Liquid Chromatography MS - alternating – hilic (1)
HPLC-LTQ-MS (1)
Liquid Chromatography MS - Negative (LC-MS (Neg)) (1)
Liquid Chromatography MS - Positive (LC-MS (Pos)) (1)
Gas Chromatography MS - positive (1)
Nuclear Magnetic Resonance (NMR) (1)
Bruker (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - alternating - reverse-phase (1)
QExactive (1)

Publication Date

2022 (22)
2025 (19)
2021 (18)
2024 (14)
2023 (14)
2020 (10)
2014 (8)
2010 (8)
2026 (8)
2015 (6)
2019 (6)
2018 (5)
2017 (4)
2016 (4)
2013 (4)
2009 (4)
2011 (3)
2012 (2)

UNIPROT ID/AC

Q6ZVE7 (3)
Q99619 (3)
Q8N4U5 (3)
Q9UBZ4 (3)
Q96QP1 (3)
Q9Y576 (3)
Q6ZTQ3 (3)
Q9H633 (3)
Q96PC5-2 (3)
Q96PC5 (3)
Q8TDW5 (3)
Q9NXZ2 (3)
Q8IZP6 (3)
Q9UHA2 (3)
Q6MZQ0 (3)
Q9C019 (3)
Q96EP1 (3)
Q8IYM2 (3)
Q86SJ2 (3)
Q02833 (3)
O43194 (3)
Q9Y2C3 (3)
O00338 (3)
Q6NSJ2 (3)
Q17R98 (3)
Q9Y664 (3)
Q9UNP4 (3)
Q96BZ9 (3)
Q8WUA8 (3)
Q3MII6 (3)

ENSEMBL ID

ENSG00000247315 (3)
ENSG00000147251 (3)
ENSG00000170477 (3)

CHEBI ID

CHEBI:30769 (10)
CHEBI:17154 (9)
CHEBI:16015 (9)
CHEBI:32816 (9)
CHEBI:16335 (8)
CHEBI:17509 (8)
CHEBI:17750 (8)
CHEBI:17203 (8)
CHEBI:15891 (8)
CHEBI:30915 (8)
CHEBI:17295 (8)
CHEBI:17822 (7)
CHEBI:18257 (7)
CHEBI:16708 (7)
CHEBI:15428 (7)
CHEBI:15741 (7)
CHEBI:37024 (7)
CHEBI:27823 (7)
CHEBI:16235 (7)
CHEBI:7916 (7)
CHEBI:18183 (7)
CHEBI:18050 (7)
CHEBI:55328 (7)
CHEBI:28834 (7)
CHEBI:16359 (7)
CHEBI:24813 (7)
CHEBI:16704 (7)
CHEBI:16027 (7)
CHEBI:16737 (7)
CHEBI:27897 (7)

Metabolite Name

Glycine (6)
Creatine (6)
1-Methylnicotinamide (5)
Pyruvic acid (5)
Phthalic acid (5)
Valine (5)
Pyroglutamic acid (5)
Carnosine (5)
Ornithine (5)
Palmitoylcarnitine (5)
Indole (5)
Citric acid (5)
Pipecolic acid (5)
Serine (5)
Adenosine (5)
Guanine (5)
Proline (5)
Creatinine (5)
L-Phenylalanine (5)
Hypoxanthine (5)
D-Glucose (4)
Leucine (4)
Toluene (4)
Cuminaldehyde (4)
Uracil (4)
Betaine (4)
Melibiose (4)
Thymine (4)
L-Proline (4)
Nicotinic acid (4)

Modification

4-tetrahydrothiazine-3-carboxylic acid (1)

Study type

Transcription profiling by array (18)
RNA-seq of coding RNA (9)
ChIP-seq (2)
RNA-seq of non coding RNA (2)
Unknown experiment type (1)
Proteomic profiling by mass spectrometer (1)

Release Date

2025 (610)
2022 (585)
2023 (514)
2024 (494)
2021 (435)
2020 (293)
2019 (215)
2018 (180)
2017 (137)
2016 (128)
2015 (91)
2026 (90)
2014 (75)
2013 (51)
2012 (38)
2011 (22)
2010 (18)
2009 (11)
2008 (8)
2005 (4)
2007 (3)
2006 (1)
2001 (1)
1997 (1)

Lab affiliation

School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, Guangdong, China (3)
University of Science and Technology of China (2)
westlake.edu.cn (2)
Medicine and Pharmacy Research Center, Binzhou Medical University (1)
Changchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, State Key Laboratory of Pathogen and Biosecurity, Key Laboratory of Jilin Province for Zoonosis Prevention and Control, Changchun, China. (1)
MOE Laboratory of Biosystem Homeostasis and Protection, College of Life Sciences, Zhejiang University; Hangzhou, Zhejiang, 310058, China (1)
APAF, Macquarie University (1)
Department of Genetics, school of Basic Medical Sciences, Tianjin Medical University, Tianjin 300070, P.R. China (1)
Henan agriculture university (1)
Stem Cell Research Center, Ren Ji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, 200127, China (1)
Centre for Discovery Brain Sciences, University of Edinburgh, UK; Simons Initiative for the Developing Brain, University of Edinburgh, UK (1)
Department of Anesthesiology, Nanjing Drum Tower Hospital,Affiliated Hospital of Medical School,Nanjing University (1)
Affiliated Hospital of Nanjing University of Chinese Medicine (1)
Univeristy of California, San Francisco (1)
Department of Genome Sciences, University of Washington, Seattle, WA 98105, USA (1)
Institute of Model Animal of Wuhan University, Wuhan, China. (1)
Key Laboratory of Pharmacology of Traditional Chinese Medical Formulae, Ministry of Education, Tianjin University of Traditional Chinese Medicine, 10 Poyanghu Road, Jinghai District,Tianjin 301617, China. (1)
Institute of Deep-sea Science and Engineering, Chinese Academy of Sciences (1)
Department of Biochemistry, SUSTech Homeostatic Medicine Institute, School of Medicine, Southern University of Science and Technology, (1)
Tianjin Univerisity of Traditional Chinese Medicine (1)
1. Nephrology Department of Guilin No. 924 Hospital, Guangxi Key laboratory of Metabolic Diseases Research, Guilin Key laboratory of Kidney Diseases Research, 541002, Guilin, Guangxi, People’s Republic of China. 2. Clinical Medical Research Center, the Second Clinical Medical College of Jinan University (Shenzhen People’s Hospital), 518020, Shenzhen, Guangdong, People’s Republic of China. (1)
Institute of Reproductive Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430030, China. (1)
China. Beijing. Capital Normal University. College of Life Science. Lab of molecular genetics and Proteomics. (1)
Department of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, Los Angeles, CA, USA Institute for Quantitative and Computational Biosciences, University of California, Los Angeles, Los Angeles, CA, USA (1)
State Key Laboratory of Crop Biology, Collaborative Innovation Center of Fruit & Vegetable Quality and Efficient Production, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, Shandong 271018, China (1)
Amgen Inc. (1)
Department of Pediatrics Medizinische Fakultät Carl Gustav Carus Technische Universität Dresden 01307 Dresden, Germany (1)
National Institute of Biological Sciences, Beijing, Beijing, China. (1)
The second affiliated Hospital, Guangzhou Medical University (1)
Department of Pharmacology, School of Basic Medical Sciences, Health Science Center, Peking University and Beijing Key Laboratory of Tumor Systems Biology, Peking University, Beijing 100191, China (1)

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Differential role of sphingomyelin in influenza virus, rhinovirus and SARS-CoV-2 infection of Calu-3 cells

Host cell lipids play a pivotal role in the pathogenesis of respiratory virus infection. However, a direct comparison of the lipidomic profile of influenza virus and rhinovirus infections is lacking. In this study, we first compared the lipid profile of influenza virus and rhinovirus infection in a ...

2022-11-15 | MTBLS2352 | MetaboLights

Fei-Yan-Qing-Hua decoction attenuates influenza virus infection by enhancing host antiviral response through microbiota-derived acetate.

Not available

S-EPMC11499185 | biostudies-literature

Analysis of changes in protein expression in inferior colliculus

One of the most robust behavioural phenotypes in the Fmr1-/ymouse is an increased susceptibility to AGS, which models the sensory hypersensitivity and epileptiform activity seen in FX patients (Berry-Kravis, 2002; Musumeci et al., 1991; Yan et al., 2004; Yan et al., 2005). Multiple therapeutic strat...

ORGANISM(S): Mus musculus (Mouse)

2025-05-02 | PXD036296 | Pride