Macpherson H H - OmicsDI

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Unknown (287)
Transcriptomics (17)
Proteomics (12)
Metabolomics (3)

Organisms

Homo sapiens (17)
Mus musculus (7)
Arabidopsis thaliana (5)
Trypanosoma brucei (1)

Repository

biostudies-arrayexpress (17)
pride (12)
MetaboLights (2)
GNPS (1)

Tissue

Cell culture (3)
Epithelial cell (3)
Neutrophil (3)
Blood (2)
Brain (2)
Epithelial cell of lung (1)
Fibroblast (1)
Liver (1)
Lung (1)
Milk (1)
Permanent cell line cell (1)
Small cell lung cancer cell (1)

Disease

Glioblastoma (3)
Breast cancer (2)
Endocervical adenocarcinoma (1)
Hepatitis (1)
Lung cancer (1)
Non-small cell lung carcinoma (1)

Technology Type

Mass Spectrometry (12)
Shotgun proteomics (6)
Data-independent acquisition (3)
Mass spectrometry (2)
Affinity purification coupled with mass spectrometry proteomics (1)
Bottom-up proteomics (1)
MSE (1)

Instrument Platform

6550 iFunnel Q-TOF LC/MS (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2012 (6)
2011 (6)
2022 (4)
2023 (3)
2025 (3)
2015 (2)
2014 (2)
2010 (1)
2026 (1)
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2018 (1)
2017 (1)
2016 (1)

CHEBI ID

CHEBI:15318 (2)
CHEBI:15676 (2)
CHEBI:15698 (2)
CHEBI:15729 (2)
CHEBI:15891 (2)
CHEBI:15940 (2)
CHEBI:15956 (2)
CHEBI:15971 (2)
CHEBI:16015 (2)
CHEBI:16027 (2)
CHEBI:16235 (2)
CHEBI:16259 (2)
CHEBI:16450 (2)
CHEBI:16467 (2)
CHEBI:16704 (2)
CHEBI:16708 (2)
CHEBI:16750 (2)
CHEBI:16828 (2)
CHEBI:16919 (2)
CHEBI:17203 (2)
CHEBI:17295 (2)
CHEBI:17368 (2)
CHEBI:17568 (2)
CHEBI:17596 (2)
CHEBI:17620 (2)
CHEBI:17748 (2)
CHEBI:17821 (2)
CHEBI:17895 (2)
CHEBI:18107 (2)
CHEBI:18211 (2)

Metabolite Name

(+)-12-hydroxy-9Z-hexadecenoic acid (1)
(+)-Armillarin (1)
(+)-Erysotrine (1)
(+)-Scalarin (1)
(+)-Tephrorin B (1)
(+)-endo-beta-Bergamotene (1)
(+)-trans-C75 (1)
(+/-)-(Z)-2-(5-Tetradecenyl)cyclobutanone (1)
(+/-)-1-(4-Methylphenyl)ethanol (1)
(+/-)-11-Methylhexadecanoic acid (1)
(+/-)-17-HDoHE (1)
(+/-)-2,4,8-Trimethyl-7-nonen-2-ol (1)
(+/-)-2-Methylthiazolidine (1)
(+/-)-20-HDoHE (1)
(+/-)-Camphoric acid (1)
(+/-)-Dulciol E (1)
(+/-)-Methyl 5-acetoxyhexanoate (1)
(+/-)-Pelletierine (1)
(+/-)-Rollipyrrole (1)
(+/-)11-HDoHE (1)
(+/-)12,13-DiHOME (1)
(+/-)13-HpODE (1)
(+/-)5-HEPE (1)
(-)-11-hydroxy-9,10-dihydrojasmonic acid (1)
(-)-3-Cyanomethyl-3-hydroxy-1H-indol-2(3H)-one (1)
(-)-8-Demethylmaritidine (1)
(-)-8-hydroxy-11E,17-octadecadien-9-ynoic acid (1)
(-)-Asbestinine 2 (1)
(-)-Ceriferol 1 (1)
(-)-Dilophol (1)

Study type

Transcription profiling by array (14)
Transcription profiling by tiling array (2)
RNA-seq of non coding RNA (1)

Release Date

2021 (35)
2025 (31)
2023 (31)
2022 (31)
2020 (25)
2018 (25)
2024 (23)
2019 (16)
2017 (15)
2012 (13)
2014 (9)
2011 (8)
2015 (7)
2010 (7)
2026 (7)
2016 (7)
2013 (7)
2008 (3)
2009 (2)
2007 (1)
2003 (1)

Lab affiliation

CRUK Beatson Institute (2)
Cancer Research UK Beatson Institute (1)
Centre for Inflammation Research, Institute for Regeneration and Repair (1)
Centre for Inflammation Research, Institute for Regeneration and Repair, University of Edinburgh (1)
Centre for Inflammation research, Institute for Regeneration and Repair, University of Edinburgh (1)
Institute of Structural and Molecular Biology, Division of Biosciences, University College London, London, United Kingdom (1)
Myeloid Cell Immunology Institute of Experimental Immunology University of Zurich Switzerland (1)
Professor, Human Biology, Fred Hutchinson Cancer Center, USA (1)
Roivant sciences, Discovery Platform, Advanced simulations, New York City, NY (1)
The University of Texas Health Science Center at San Antonio (1)
VP, Advanced Simulations, Roivant Discovery, Inc (1)

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Alterations in Gene Expression in Human Mesothelial Cells Correlate with Mineral Pathogenicity

Human mesothelial cells (LP9/TERT-1) were exposed to low and high (15 and 75 μm2/cm2 dish) equal surface area concentrations of crocidolite asbestos, nonfibrous talc, fine titanium dioxide (TiO2), or glass beads for 8 or 24 h. RNA was then isolated for Affymetrix microarrays, GeneSifter analysis and...

ORGANISM(S): Homo sapiens

2011-09-18 | E-GEOD-14034 | biostudies-arrayexpress

Towards consistency in dietary pattern scoring: standardising scoring workflows for healthy dietary patterns using 24-h recall and two variations of a food frequency questionnair.

Not available

S-EPMC11043911 | biostudies-literature

CABOT-O₃: An Optimization Model for Air Quality Benefit-Cost and Distributional Impacts Analysis.

Not available

S-EPMC8358824 | biostudies-literature

Seminal fluid induces cytokine and chemokine mRNA expression in the human cervix after coitus

In mice, seminal fluid elicits an inflammation-like response in the female genital tract that activates immune adaptations to advance the likelihood of conception and pregnancy. Here we examined whether similar changes in leukocyte and cytokine parameters occur in the human cervix in response to the...

ORGANISM(S): Homo sapiens

2011-11-17 | E-GEOD-33745 | biostudies-arrayexpress

Evaluation of the added value of ¹H-magnetic resonance spectroscopy for the diagnosis of pediatric brain lesions in clinical practice.

Not available

S-EPMC5909808 | biostudies-literature

Timing of hypoxia PET/CT imaging after 18F-fluoromisonidazole injection in non-small cell lung cancer patients.

Not available

S-EPMC9758119 | biostudies-literature

A new species of squat lobster of the genus Hendersonida (Crustacea, Decapoda, Munididae) from Papua New Guinea.

Not available

S-EPMC7256070 | biostudies-literature

Diurnal variation of NMR based blood metabolites in calves fed a high plane of milk replacer: a pilot study.

Not available

S-EPMC5569568 | biostudies-literature

An in vivo screening platform using PDX models reveals KEAP1, USP22 and other drivers of chemoresistance in small cell lung cancer

Small cell lung cancer (SCLC) is characterized by exquisite chemosensitivity followed by rapid emergence of chemoresistance. To identify genetic events that drive resistance to cisplatin-etoposide chemotherapy, we conducted cDNA overexpression and CRISPR knockout screens in an in vivo platform cente...

ORGANISM(S): Mus musculus (Mouse) Homo sapiens (Human)

2026-04-20 | PXD048813 | Pride

Serum albumin binding knob domains engineered within a V_H framework III bispecific antibody format and as chimeric peptides.

Not available

S-EPMC10213618 | biostudies-literature

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