Sort   by:  
 Page size 
ProteomicsH2A.Z histone variants facilitate HDACi-dependent removal of H3.3K27M mutant protein in paediatric high-grade glioma cells
Diffuse intrinsic pontine gliomas (DIPG) are a deadly paediatric brain tumours, non-resectable due to brainstem localisation and diffusive growth. Patients with DIPG have a dismal prognosis of 9-12 months of survival with no effective therapy. Over 80% of DIPGs harbour a mutation in histone 3 (H3.3 ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2023-10-05 | MSV000093052 | MassIVE
TranscriptomicsHeritability of alternative splicing in the human genome
Alternative pre-mRNA splicing increases proteomic diversity and provides a potential mechanism underlying both phenotypic diversity and susceptibility to genetic disorders in human populations. To investigate the variation in splicing among humans on a genomewide scale, we use a comprehensive exon-t...
ORGANISM(S): Homo sapiens 
2007-08-07 | E-GEOD-7952 | biostudies-arrayexpress
TranscriptomicsAlternative splicing is frequent during early embryonic development in mouse
Background Alternative splicing is known to increase the complexity of mammalian transcriptomes since nearly all mammalian genes express multiple pre-mRNA isoforms. However, our knowledge of the extent and function of alternative splicing in early embryonic development is based mainly on a few isola...
ORGANISM(S): Mus musculus 
2010-07-30 | E-GEOD-21971 | biostudies-arrayexpress
TranscriptomicsFrequent driver mutations in histone H3.3 and chromatin remodeling genes in paediatric glioblastoma
Whole exome sequencing identified frequent driver mutations in a series of paediatric glioblastomas We used microarray-based profiling to investigate differences in gene expression according to mutational status of driver genes RNA from 27 primary tumor samples was subject to QC by Agilent BioAnalys...
ORGANISM(S): Homo sapiens 
2012-03-01 | E-GEOD-34824 | biostudies-arrayexpress
ProteomicsTrinucleotide cap analogs with N6-adenosine modifications: interaction partners in HEK293F cell line
A series of trinucleotide cap analogs functionalized with an amine-terminated linker at the guanosine ribose and immobilized on BrCN-activated Sepharose was prepared. These affinity resins AR-1 (Am), AR-2 (m6Am), and AR-3 (Bn6Am) were incubated with HEK293F cell extract in the presence of GTP to lim...
ORGANISM(S): Homo sapiens (Human) 
2024-03-08 | PXD046838 | Pride
5′ cap N6-benzyladenosine Mrna Hek293 N6-methyladenosine 
Genomicsena-DATASET-MUGQIC-21-03-2014-16:25:00:707-841 - samples
Exome sequencing of familial and sporadic small cell cancer of ovary cases.
EGAD00001000791 | EGA
Genomicsena-DATASET-MUGQIC-22-03-2014-14:08:20:709-444 - samples
Whole exome sequencing of paediatric glioblastoma with mutations reported in the manuscript: Mutations in ACVR1, FGFR1 and TP53 associate with tumor location in histone H3 K27M pediatric midline high-grade astrocytoma
EGAD00001000792 | EGA
GenomicsLocation specific ACVR1, FGFR1 and TP53 mutations in pediatric glioblastomas in conjunction with H3.3 K27M.
Recurrent somatic H3 K27M mutations characterize midline pediatric high-grade astrocytomas (pHGAs). In 40 treatment-naïve midline pHGAs we find additional somatic mutations specific to tumor location. Gain-of-function mutations in ACVR1 occur in tumors of the pons in conjunction with H3.1K27M, whil...
EGAS00001000720 | EGA
GenomicsMcGill-DKFZ Pediatric Brain Tumour Consortium
Data Access Committee EGAC00001000048
EGAC00001000048 | EGA
GenomicsRNA-SEQ_DATA_SET_rain_PA_2012_10_22 - samples
Pilocytic Astrocytoma ICGC PedBrain RNA sequencing
EGAD00001000617 | EGA
Sort   by:  
 Page size