Marin M M - OmicsDI

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Unknown (2820)
Proteomics (43)
Transcriptomics (24)
Genomics (9)
Metabolomics (7)

Organisms

Aerococcus urinae NBRC 15544 = CCUG 36881 (39)
Alteromonadales (39)
Bacteria (39)
Canis lupus familiaris (39)
Carya cathayensis (39)
Ectopseudomonas oleovorans CECT 5344 (39)
Ensifer adhaerens (39)
Enterococcus faecalis (39)
Globicatella sanguinis (39)
Halictus scabiosae (39)
Histomonas meleagridis (39)
Human immunodeficiency virus 1 (39)
Listeria monocytogenes (39)
Listeria monocytogenes EGD-e (39)
Methylohalobius crimeensis 10Ki (39)
Mus musculus (39)
Mycobacterium tuberculosis (39)
Homo sapiens (13)
Mus musculus (5)
Rattus norvegicus (2)
Seminavis robusta (1)
Blumeria graminis (1)
Corynebacterium glutamicum (1)
Salmo salar (1)
Sus scrofa (1)
Danio rerio (1)
Arabidopsis thaliana (1)
Prochlorococcus (1)
Trichodesmium erythraeum IMS101 (1)
Candidatus Atelocyanobacterium thalassae (1)

Organisms

Candidatus Atelocyanobacterium thalassae (1)
Trichodesmium erythraeum IMS101 (1)
Prochlorococcus (1)
seawater metagenome (1)

Repository

pride (39)
biostudies-arrayexpress (23)
MetaboLights (6)
ENA (5)
EGA (3)
geo (3)
MassIVE (2)
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iProX (1)

Tissue

Blood serum (5)
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Blood (1)
Blood cell (1)
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Colon (1)
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Gill (1)
HeLa cell (1)
Hepatocyte (1)
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Lung (1)
Whole body (1)

Disease

Colon cancer (5)
Cholangiocarcinoma (2)
Acute leukemia (1)
Alpha 1-antitrypsin deficiency (1)
Amebiasis (1)
Breast cancer (1)
COVID-19 (1)
Cancer (1)
Cutaneous malignant melanoma 1 (1)
Glioblastoma (1)
Parkinson's disease (1)
Primary sclerosing cholangitis (1)
Ulcerative colitis (1)

Technology Type

Mass Spectrometry (39)
Shotgun proteomics (19)
Bottom-up proteomics (6)
SRM/MRM (5)
Mass spectrometry (4)
Affinity purification coupled with mass spectrometry proteomics (3)
Gel-based experiment (3)
Top-down proteomics (3)
Data-dependent acquisition (2)
SWATH MS (2)
AB SOLiD 4 System (1)
NMR spectroscopy (1)
Mass spectrometry assay (1)
Data-independent acquisition (1)

Instrument Platform

Q Exactive (3)
5975C Series GC/MSD (Agilent) (2)
Thermo Fisher (1)
InnoScan 900 (1)
Illumina HiSeq 4000 (1)
Agilent 5975T LTM GC/MSD (Agilent) (1)
6540 Q-TOF LC/MS (Agilent) (1)
Bruker (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
ThermoFinnigan LTQ Orbitrap (1)

Publication Date

2022 (11)
2020 (8)
2015 (6)
2018 (6)
2024 (6)
2025 (5)
2019 (4)
2012 (4)
2017 (4)
2023 (4)
2013 (3)
2026 (3)
2016 (2)
2010 (2)
2008 (2)
2021 (2)
2009 (1)
2007 (1)
2006 (1)

CHEBI ID

CHEBI:138086 (1)
CHEBI:138082 (1)
CHEBI:138080 (1)
CHEBI:90283 (1)
CHEBI:90275 (1)
CHEBI:90280 (1)
CHEBI:3594 (1)
CHEBI:138083 (1)
CHEBI:6358 (1)
CHEBI:16220 (1)
CHEBI:138081 (1)
CHEBI:138085 (1)
CHEBI:520 (1)
CHEBI:77439 (1)
CHEBI:33942 (1)
CHEBI:131743 (1)
CHEBI:133145 (1)
CHEBI:18186 (1)
CHEBI:17234 (1)
CHEBI:16112 (1)
CHEBI:28044 (1)
CHEBI:7916 (1)
CHEBI:16015 (1)
CHEBI:78320 (1)
CHEBI:27897 (1)

Metabolite Name

Sucrose (3)
Coniferin (2)
Galactonic acid (2)
LysoPE(0:0/16:0) (2)
LysoPE(0:0/18:0) (2)
Pyroglutamic acid (2)
L-Proline (2)
Adenosine monophosphate (2)
NAD (2)
Pantothenic acid (2)
Citric acid (2)
Malic acid (2)
Pipecolic acid (2)
Tyrosine (2)
Uridine 5'-diphosphate (2)
L-Tryptophan (2)
L-Glutamine (2)
Glycerophosphocholine (2)
L-Leucine (2)
L-Phenylalanine (2)
Lactucopicrin (1)
Tri-4-hydroxyphenylacetyl glucoside (1)
11beta,13-dihydrolactucopicrin (1)
Lactucopicrin-15-oxalate (1)
8-Deacetylmatricarin-8-sulfate (1)
Dicaffeoyltartaric acid (1)
Coumaroyltartaric acid (1)
Isoleucine-hexose (1)
Leucine-hexose (1)
Dicaffeoylquinic acid (1)

First Public Date

2022 (2)
2021 (1)
2018 (1)
2017 (1)

Modification

Not available (1)

Study type

Transcription profiling by array (13)
RNA-seq of coding RNA (4)
Other (2)
Human - Methylation microarray (1)
Genotyping by array (1)
Antigen profiling (1)
ChIP-seq (1)

Release Date

2022 (391)
2021 (352)
2025 (344)
2023 (328)
2024 (291)
2020 (254)
2019 (202)
2018 (121)
2017 (110)
2016 (92)
2015 (66)
2014 (61)
2026 (54)
2011 (39)
2012 (33)
2013 (33)
2010 (18)
2009 (14)
2008 (13)
2007 (9)
2006 (6)
2003 (5)
1999 (2)
2002 (1)
2001 (1)
2000 (1)
1998 (1)

Lab affiliation

Functional proteomics group; Molecular Biomedicine department; CIB-CSIC (3)
1.Department of Medical Oncology, Inselspital, Bern University Hospital, University of Bern, 3010 Bern, Switzerland. 2.Department for BioMedical Research, University of Bern, 3008 Bern, Switzerland. 3. Conway Institute for Biomolecular and Biomedical Research, University College Dublin, Dublin D04 V1W8, Ireland. (1)
Assistant Professor at Department of Chemical and Pharmaceutical Sciences, University of Trieste, Italy (1)
Center for Genomic Regulation, Universitat Pompeu Fabra, 08003 Barcelona, Spain (1)
Centro de Biología Molecular Severo Ochoa (CBMSO), Consejo Superior de Investigaciones Científi-cas-Universidad Autónoma de Madrid (CSIC-UAM), Madrid, Spain (1)
China Agricultural University, 100193, China (1)
College of Life Science & Technology Beijing University of Chemical Technology Beijing, 10029, China (1)
College of Veterinary Medicine, Yangzhou University, Yangzhou 225009, PR China (1)
Department of Biochemistry, Genetics and Immunology, University of Vigo, Spain (1)
Department of Biology, University of Bergen, Bergen, Norway (1)
Department of Cellular and Molecular Medicine, Centro de Investigaciones Biológicas (CIB-CSIC), Madrid, Spain (1)
Department of Human Molecular Genetics and Biochemistry Sackler Faculty of Medicine, Tel Aviv University Israel (1)
Department of Life Sciences and Systems Biology, University of Turin (1)
Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India (1)
Functional proteomics department; Molecular Biomedicine department; CIB-CSIC (1)
Hepatology Program, CIMA, University of Navarra. Avda. Pio XII, n55. 31008 Pamplona, Spain. (1)
Institut Pasteur, 25 rue du Dr. Roux, 75724 Paris cedex 15, France (1)
Institut Pasteur, Paris, F-75015, France (1)
Institut of Animal Science and Technology, Universitat Politècnica de València, 46022 Valencia, Spain (1)
Institut of Animal Science and Technology, Universitat Politècnica de València, 46022 Valencia, Spain. (1)
Institute for Research in Biomedicine (IRB), Barcelona Institute of Science and Technology (BIST), Barcelona 08028, Spain; Catalan Institution for Research and Advanced Studies (ICREA), Barcelona 08010, Spain (1)
Institute of Apicultural Research (1)
Institute of Apicultural Research, Chinese Academy of Agricultural Sciences (1)
Institute of Apicultural Research, Chinese Academy of Agricultural Sciences, No. 1 Beigou Xiangshan, Beijing, 100193, China (1)
Javier Muñoz, PhD - Head of Proteomics Unit Spanish National Cancer Research Centre (CNIO) Address: Melchor Fernández Almagro, 3. 28029 Madrid. SPAIN Phone: +34 917 328 000 Ext. 3110 (1)
Laboratory for Biological Mass Spectrometry, Biosciences Institute, Newcastle University, Newcastle-upon-Tyne, NE2 4HH, UK (1)
Neuroproteomics and signaling of neurological and psychiatric disorders, IGF, France (1)
Professor, Department of Cellular and Molecular Pharmacology (1)
Proteomics Core Facility and Research Group Proteomics, CEITEC-MU, Masaryk University, Brno, Czech Republic (1)
Proteomics Platform CIC bioGUNE Bizkaia Tech. Park Build. 800 Derio 48160 Spain (1)

Tags

xref:PubMed:30602582 (2)
xref:PubMed:36098532 (1)

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Assessing breast cancer risk models in Marin County, a population with high rates of delayed childbirth.

Not available

S-EPMC8040293 | biostudies-literature

Assessment of salivary cadmium levels and breast density in the Marin Women's Study.

Not available

S-EPMC10831917 | biostudies-literature

Use of SMS-linked electronic surveys for COVID-19 case investigation and contact tracing - Marin County, CA, USA.

Not available

S-EPMC8320401 | biostudies-literature

Differences in reproductive risk factors for breast cancer in middle-aged women in Marin County, California and a sociodemographically similar area of Northern California.

Not available

S-EPMC2670264 | biostudies-literature

Differential timing for glucose assimilation in Prochlorococcus and coexistent microbial populations at the North Pacific Subtropical Gyre

Investigation of whole genome gene expression level changes in Prochlorococcus from environmental samples. The diel gene expression analyzed in this study is further described in Muñoz-Marin, M., Duhamel, S., Björkman, K., Magasin, J., Díez, J., Karl, D.M., Garcia-Fernandez, J.M., 2021. ISME J. (to...

ORGANISM(S): Prochlorococcus

2022-08-23 | GSE154594 | GEO

COVIDiSTRESS diverse dataset on psychological and behavioural outcomes one year into the COVID-19 pandemic.

Not available

S-EPMC9213519 | biostudies-literature

Transcriptional cycle suited to daytime N2 fixation in the unicellular cyanobacterium Candidatus Atelocyanobacterium thalassa (UCYN-A)

Investigation of whole genome gene expression level changes in two strains of the cyanobacteria Atelocyanobacterium thalasaa (UCYN-A) from environmental samples. The diel gene expression analyzed in this study is further described in Muñoz-Marin, M., I. N. Shilova, T. Shi, H. Farnelid & J. P. Zehr. ...

ORGANISM(S): Candidatus Atelocyanobacterium thalassae

2018-12-05 | GSE100124 | GEO

Tau-Marin Mucoadhesive Gel for Prevention and Treatment of Gum Diseases.

Not available

S-EPMC10453578 | biostudies-literature

Diel gene expression analysis of Trichodesmium erythraeum IMS101 in light and dark cycle

Investigation of whole genome gene expression level changes in Trichodesmium erythraeum IMS101 during a 24-hr light and dark cycle. The diel gene expression analyzed in this study is further described in Muñoz-Marin, M., I. N. Shilova, T. Shi, H. Farnelid & J. P. Zehr. 2019. The transcriptional cycl...

ORGANISM(S): Trichodesmium erythraeum IMS101

2017-06-11 | GSE99896 | GEO

m⁶A Profile Dynamics Indicates Regulation of Oyster Development by m⁶A-RNA Epitranscriptomes.

Not available

S-EPMC10787124 | biostudies-literature

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2903 Results

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