Marine-derived - OmicsDI

Show results for

Unknown (3046)
Genomics (892)
Transcriptomics (58)
Proteomics (37)
Metabolomics (24)
Models (2)
Clinical (1)
Other (1)

Organisms

Homo sapiens (21)
Mus musculus (6)
Solea senegalensis (5)
Salmo salar (2)
Vibrio parahaemolyticus RIMD 2210633 (2)
Thalassiosira pseudonana CCMP1335 (2)
unidentified (2)
Sparus aurata (2)
Saccharomyces cerevisiae S288C (2)
Saccharomyces cerevisiae (2)
Cloeon dipterum (1)
Platynereis dumerilii (1)
Bodo saltans (1)
Petromyzon marinus (1)
synthetic construct (1)
Pseudovibrio brasiliensis (1)
Cobetia marina (1)
uncultured proteobacterium 65D09 (1)
uncultured gamma proteobacterium eBACHOT4E07 (1)
uncultured marine bacterium 577 (1)
uncultured marine bacterium EB000_55B11 (1)
uncultured crenarchaeote 74A4 (1)
uncultured Pseudomonadota bacterium (1)
uncultured marine alpha proteobacterium (1)
uncultured marine group II euryarchaeote EF100_57A08 (1)
uncultured marine bacterium 583 (1)
uncultured marine bacterium 440 (1)
uncultured proteobacterium 60D04 (1)
uncultured marine bacterium EB0_41B09 (1)
uncultured marine group II euryarchaeote 37F11 (1)

Organisms

Homo sapiens (15)
marine metagenome (11)
unidentified (7)
marine sediment metagenome (6)
Mus musculus (5)
Bacillus subtilis (4)
soil metagenome (4)
Cladorhizidae sp. MBARI D1340-BT2 (3)
Salinispora oceanensis (3)
seawater metagenome (3)
Salinispora tropica CNS416 (2)
Methylophaga nitratireducenticrescens (2)
Salinispora mooreana (2)
Penicillium sp. DSF059 (2)
Vreelandella titanicae (2)
Aeromonas caviae (2)
annelid metagenome (2)
Gasterosteus aculeatus (2)
Alteromonas sp. RKMC-009 (1)
uncultured marine virus (1)
uncultured marine RNA virus (1)
Streptomyces sp. Je 1-4 4N24 (1)
Dascyllus marginatus (1)
Dascyllus abudafur (1)
Pseudoalteromonas sp. PA2MD11 (1)
Penicillium steckii (1)
Pseudonocardia sp. WMMC193 (1)
Brachybacterium ginsengisoli (1)
Bacillus sp. B19-2 (1)
Hysterium pulicare CBS 123377 (1)

Repository

ENA (889)
geo (36)
biostudies-arrayexpress (26)
pride (26)
MetaboLights (15)
MassIVE (10)
GNPS (9)
BioModels (2)
iProX (1)

Tissue

Cell culture (6)
Whole body (4)
Photosynthetic cell (3)
Brain (1)
Cell line cell (1)
Colon (1)
Colon epithelial cell (1)
Egg (1)
Liver (1)
Macrophage (1)
Mucus secretion (1)
Multicellular organism (1)
Skin mucus (1)

Disease

Mixoid liposarcoma (1)
Adenomatous Polyps (1)
Fatty liver disease (1)
Leukemia (1)
Plasmodium falciparum malaria (1)
Ulcerative colitis (1)

Technology Type

Mass Spectrometry (26)
Shotgun proteomics (17)
Mass spectrometry (10)
NMR spectroscopy (3)
Mass spectrometry assay (3)
Bottom-up proteomics (3)
Data-independent acquisition (3)
Data-dependent acquisition (2)
SWATH MS (2)
Affinity proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (5)
Liquid Chromatography MS - negative - reverse phase (5)
Thermo Scientific LTQ FT Ultra (3)
Xevo G2 Q-Tof (3)
Illumina HiSeq 2000 (2)
Agilent 6530 Accurate Mass Q-TOF (2)
Q Exactive (2)
LTQ Orbitrap Elite (2)
Nuclear Magnetic Resonance (NMR) - (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive - hilic (2)
C1 Single-Cell Auto Prep System, Fluidigm (1)
NextSeq 550 (1)
Illumina NovaSeq 6000 (1)
6530 Quadrupole Time of Flight MS (Agilent Instrument) (1)
6530A Q-TOF LC/MS (1)
Agilent iFunnel 6550 Q-ToF LC/MS System (1)
HPLC HRESIMS (1)
LCMS-IT-TOF (1)
Impact II (1)
MaXis (1)
MicrOTOF-Q III (1)
Orbitrap Fusion Lumos (1)
Q Exactive HF (1)
Liquid Chromatography MS – negative - reverse phase (1)
Varian (1)
TSQ Vantage (Thermo Scientific) (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - - reverse phase (1)

Publication Date

2025 (14)
2024 (12)
2010 (12)
2026 (10)
2023 (9)
2020 (9)
2019 (9)
2021 (8)
2014 (7)
2022 (5)
2018 (5)
2017 (4)
2015 (4)
2012 (4)
2009 (3)
2016 (2)
2013 (2)
2011 (2)
2008 (2)
2007 (1)
2006 (1)

CHEBI ID

CHEBI:26271 (6)
CHEBI:28044 (6)
CHEBI:18237 (5)
CHEBI:22660 (5)
CHEBI:15741 (5)
CHEBI:17750 (5)
CHEBI:17596 (5)
CHEBI:30769 (5)
CHEBI:16691 (4)
CHEBI:17822 (4)
CHEBI:17202 (4)
CHEBI:26986 (4)
CHEBI:28300 (4)
CHEBI:18257 (4)
CHEBI:24898 (4)
CHEBI:25017 (4)
CHEBI:6650 (4)
CHEBI:16865 (4)
CHEBI:16335 (4)
CHEBI:27266 (4)
CHEBI:7916 (4)
CHEBI:18211 (4)
CHEBI:15891 (4)
CHEBI:16449 (4)
CHEBI:29016 (4)
CHEBI:16027 (4)
CHEBI:16457 (3)
CHEBI:15573 (3)
CHEBI:44111 (3)
CHEBI:18026 (3)

Metabolite Name

Syringic acid (3)
Pantothenic acid (3)
D-glucosamine 6-phosphate (3)
Xanthosine (3)
Proline (3)
Inosine (3)
Xanthine (3)
Phenylalanine (3)
Citric acid (3)
D-Ribose 5-phosphate (3)
Phosphoglyceric acid (2)
3-hydroxybenzoic acid (2)
Alpha-ketoglutaric acid (2)
N-acetyl-D-glucosamine 6-phosphate (2)
Inosine 5'-monophosphate (2)
Glutamic acid (2)
Glucose 6-phosphate (2)
Fructose 6-phosphate (2)
Desthiobiotin (2)
Ciliatine (2)
Aspartic acid (2)
Adenosine 5'-monophosphate (2)
Phosphoenolpyruvate (2)
Ethanolamine (2)
Phosphoric acid (2)
Leucine (2)
Galactose (2)
Guanosine (2)
Citrulline (2)
Betaine (2)

First Public Date

2018 (276)
2019 (88)
2013 (78)
2021 (68)
2024 (62)
2026 (61)
2022 (55)
2025 (48)
2015 (43)
2023 (33)
2014 (24)
2020 (23)
2017 (20)
2016 (8)
2012 (1)
2011 (1)

Modelling Approach

Constraint-based model (2)

Study status

Completed (1)

Lab affiliation

CSIR-National Institute of Oceanography (2)
University of Washington Department of Genome Sciences (2)
Xiamen University, China (2)
Associate Professor (1)
Biology (1)
Dalhousie University (1)
Department of Pathology The University of Michigan 1150 W Medical Center Dr Ann Arbor, MI 48109, USA (1)
Department of Pathology, University of Michigan, 1150 W Medical Center Dr, 7510D MSRB1, Ann Arbor, MI, 48109. (1)
Ernst-Moritz-Arndt-University Greifswald Center for Functional Genomics of Microbes Institute for Microbiology Department of Microbial Proteomics Felix-Hausdorff-Str.8 17489 Greifswald (1)
Genecology Research Centre, University of the Sunshine Coast (1)
Mass Spectrometry Centre, LAQV-REQUIMTE—Associated Laboratory for Green Chemistry of the Network of Chemistry and Technology, Department of Chemistry, University of Aveiro, 3810-193 Aveiro, Portugal (1)
Microbiology department, IVAGRO, UCA (1)
Professor, Department of Biology, Norwegian University of Science and Technology, N-7491, Trondheim, Norway (1)
State Key Laboratory of Marine Environmental Science/College of the Environment and Ecology, Xiamen University, Xiamen, 361005, China (1)
State Key Laboratory of Natural and Biomimetic Drugs, Chemical Biology Center, School of Pharmaceutical Sciences, Peking University (1)
University of Cadiz (1)
University of Cádiz/IVAGRO (1)
University of Southampton (1)
University of Washington (1)
University of Washington Department of Genome Sciences (1)
Universität Greifswald Institut für Pharmazie, AG Pharmazeutische Biotechnologie Greifswald, Germany (1)
Xiamen University (1)
Zunyi medical University (1)