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TranscriptomicsTranscription profiling of Arabidopsis gl3-sst sim trichomes
Transcriptional profiling of isolated gl3-sst sim trichomes.
ORGANISM(S): Arabidopsis thaliana 
2009-02-04 | E-MEXP-2013 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis ecotype Columbia trichomes
Leaf trichomes of Columbia isolated using associated protocol.
ORGANISM(S): Arabidopsis thaliana 
2009-02-03 | E-MEXP-2008 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis homeodomain 2 trichomes
Transcriptional profiling of isolated homeodomain 2 (hd2) trichomes
ORGANISM(S): Arabidopsis thaliana 
2009-02-04 | E-MEXP-2022 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis ecotype Columbia leaf tissue processed for trichome isolation
Transcriptional profiling of leaf tissue processed for trichome isolation.
ORGANISM(S): Arabidopsis thaliana 
2009-02-04 | E-MEXP-2014 | biostudies-arrayexpress
TranscriptomicsKc167 Replication Timing
modENCODE_submission_668 This submission comes from a modENCODE project of David MacAlpine. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: The relative time of replication for all unique sequences in the Drosophila genome was determined by synchronizing tissue ...
ORGANISM(S): Drosophila melanogaster 
2009-07-29 | E-GEOD-17279 | biostudies-arrayexpress
TranscriptomicsKc167 ORC2 Localization
modENCODE_submission_674 This submission comes from a modENCODE project of David MacAlpine. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We will precisely identify sequence elements that direct DNA replication by using chromatin immunoprecipitation of known r...
ORGANISM(S): Drosophila melanogaster 
2010-05-15 | E-GEOD-17282 | biostudies-arrayexpress
Transcriptomics5-azacytidine treatment reorganizes genomic histone modification patterns
Methylation of DNA in combination with histone modifications establishes an epigenetic code that ensures the proper control of gene expression. Although DNA methyltransferases have been shown to interact with histone methyltransferases such as EZH2 (which methylates histone H3 on lysine 27) and G9a ...
ORGANISM(S): Homo sapiens 
2010-04-09 | E-GEOD-20598 | biostudies-arrayexpress
TranscriptomicsKc167 Replication Origins
modENCODE_submission_709 This submission comes from a modENCODE project of David MacAlpine. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: Early origins of replication were identified by treating cells with hydroxyurea (HU), a potent inhibitor of nucleotide syn...
ORGANISM(S): Drosophila melanogaster 
2010-05-15 | E-GEOD-17285 | biostudies-arrayexpress
GenomicsDynamic loss of H2B ubiquitylation without corresponding changes in H3K4 tri-methylation during myogenic differentiation
Ubiquitylation of H2B on lysine 120 (H2Bub) is associated with active transcriptional elongation. H2Bub has been implicated in histone cross-talk and is generally regarded to be a prerequisite for H3K4 and H3K79 tri-methylation in both yeast and mammalian cells. We performed a genome-wide analysis o...
ORGANISM(S): Mus musculus 
2012-03-06 | E-GEOD-34960 | biostudies-arrayexpress
ProteomicsExtracellular vesicles impose quiescence and confer DNA-damage on residual HSC in the AML niche
To understand the mechanism by which AML-EVs may enforce quiescence, we performed tandem mass tag (TMT) proteomic profiling of in vitro cultured c-Kit+ hematopoietic stem and progenitor cells (HSPC) (to obtain the minimum required amount of protein lysates) treated with extracellular vesicles (EVs) ...
ORGANISM(S): Mus musculus (Mouse) 
2019-06-24 | PXD013688 | Pride
Aml-derived extracellular vesicles Isobaric labeling Proteomics Bone marrow Acute myeloid leukemia (aml) Mouse Tandem mass tags 
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