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ModelsMatsuoka2003_VentricularCells_SinoatrialNodePacemaker
This a model from the article: Role of individual ionic current systems in ventricular cells hypothesized by a model study. Matsuoka S, Sarai N, Kuratomi S, Ono K, Noma A. Jpn J Physiol 2003 Apr;53(2):105-23 12877767 , Abst...
2005-01-01 | MODEL1006230058 | BioModels
UnknownCharacterization of integrative and conjugative elements carrying erm(B) and tet(O) resistance determinants in streptococcus uberis isolates from bovine milk in Chiba prefecture, Japan: CompArative GEne cluster analysis toolbox with ICEfinder.
Not available
S-EPMC11665227 | biostudies-literature
TranscriptomicsCell cycle-regulated gene expression in tobacco cells
Tobacco BY-2 cells can be highly synchronized by treatment with an inhibitor of DNA synthesis, aphidicolin. For comprehensive understanding of cell cycle-regulated gene expression in tobacco, microarray analysis was conducted in synchronized cultures of BY-2 cells. Cells were treated with aphidicoli...
ORGANISM(S): Nicotiana tabacum 
2010-05-22 | E-GEOD-14250 | biostudies-arrayexpress
ModelsMizuno2012 - AlzPathway: a comprehensive map of Alzheimer's disease
Mizuno2012 - AlzPathway: a comprehensive map of Alzheimer's disease Non-kinetic molecular map. Pure SBML file of AlzPathway provided by the authors as Additional file 5. This model is described in the article: AlzPathway: a comprehensive map of signaling pathways of Alzheime...
2016-05-09 | MODEL1504290001 | BioModels
ModelsSarai2003_CardiacSAnodePacemaker
This a model from the article: Role of individual ionic current systems in the SA node hypothesized by a model study. Sarai N, Matsuoka S, Kuratomi S, Ono K, Noma A. Jpn J Physiol 2003 Apr;53(2):125-34 12877768 , Abstract: ...
2005-01-01 | MODEL1006230108 | BioModels
TranscriptomicsOverexpression of NtmybA2 in tobacco BY-2 cells
Promoters of many G2/M phase-specific genes in plants contain mitosis-specific activator (MSA) elements, which act as G2/M phase-specific enhancers and bind with R1R2R3-Myb transcription factors. A least three R1R2R3-Myb proteins are expressed in tobacco (Nicotiana tabacum). To examine the genome-wi...
ORGANISM(S): Nicotiana tabacum 
2010-05-22 | E-GEOD-14251 | biostudies-arrayexpress
ProteomicsLFQ of PROTAC-dependent biotinylated peptides in MM1.S cells expressing AirID-CRBN
MM1.S cells stably expressing AGIA-AirID-CRBN-WT were treated with DMSO, 1 µM pomalidomide, or 0.1 µM ARV-825 in the presence of 5 µM biotin and 5 µM MG132 for 6 h in three biological replicates. After tryptic digestion, biotinylated peptides were enriched with Tamavidin 2-REV and analyzed by LC-MS/...
ORGANISM(S): Homo Sapiens (human) 
2021-11-06 | PXD028763 | JPOST Repository
ProteomicsComparison of three enrichment methods of biotinylated peptides or proteins from AirID-CRBN-expressing MM1.S cells
MM1.S cells stably expressing AGIA-AirID-CRBN were treated with DMSO or 10 µM pomalidomide in the presence of 10 µM biotin and 5 µM MG132 for 8 h in three biological replicates. The cells were divided into three tubes and lysed. After tryptic digestion, biotinylated peptides were enriched using Tama...
ORGANISM(S): Homo Sapiens (human) 
2021-11-06 | PXD028754 | JPOST Repository
TranscriptomicsTranscription profiling of mouse lung to study the effect of prostaglandin E receptor subtype EP3 on mouse asthma model.
We examined the effect of PGE receptor EP3 subtype on mouse OVA-induced asthma model. We treat EP3 agonist 3h after OVA challenge. After 24 h of 3rd OVA challenge, whole lung was isolated and the gene expression change was determined.
ORGANISM(S): Mus musculus 
2007-09-25 | E-GEOD-2276 | biostudies-arrayexpress
ProteomicsNeo-substrate selectivity of IMiDs on biotinylation by AirID-CRBN
MM1.S cells stably expressing AGIA-AirID-CRBN-WT were treated with DMSO, 20 µM thalidomide, 10 µM lenalidomide, 10 µM pomalidomide or 20 µM 5-hydroxythalidomide (5HT) in the presence of 10 µM biotin and 5 µM MG132 for 8 h in three biological replicates. After tryptic digestion, biotinylated peptides...
ORGANISM(S): Homo Sapiens (human) 
2021-11-06 | PXD028755 | JPOST Repository
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