Matthews B B - OmicsDI

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Unknown (1700)
Transcriptomics (49)
Genomics (45)
Proteomics (42)
Metabolomics (8)
Models (1)

Organisms

Homo sapiens (75)
Mus musculus (23)
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Trypanosoma brucei (8)
Trypanosoma brucei brucei (4)
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1720309 (1)
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Flaviviridae (1)
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CHEBI ID

CHEBI:15354 (5)
CHEBI:16027 (5)
CHEBI:15741 (4)
CHEBI:16335 (4)
CHEBI:16695 (4)
CHEBI:16737 (4)
CHEBI:16761 (4)
CHEBI:17568 (4)
CHEBI:15428 (3)
CHEBI:15676 (3)
CHEBI:15891 (3)
CHEBI:16235 (3)
CHEBI:16436 (3)
CHEBI:16530 (3)
CHEBI:16704 (3)
CHEBI:16708 (3)
CHEBI:16732 (3)
CHEBI:16742 (3)
CHEBI:16811 (3)
CHEBI:17311 (3)
CHEBI:17361 (3)
CHEBI:17405 (3)
CHEBI:17489 (3)
CHEBI:17596 (3)
CHEBI:17604 (3)
CHEBI:17712 (3)
CHEBI:17724 (3)
CHEBI:17748 (3)
CHEBI:17754 (3)
CHEBI:17821 (3)

Metabolite Name

UMP (4)
ADP (3)
AMP (3)
CDP-ethanolamine (3)
Succinate (3)
(2S)-2-Isopropylmalate (2)
(R)-3-Hydroxybutanoate (2)
(S)-1-Pyrroline-5-carboxylate (2)
(S)-3-Methyl-2-oxopentanoic acid (2)
(S)-Malate (2)
16-hydroxypalmitate (2)
2,7-Anhydro-alpha-N-acetylneuraminic acid (2)
2-(Acetamidomethylene)succinate (2)
2-(alpha-D-Galactosyl)-sn-glycerol 3-phosphate (2)
2-Acetolactate (2)
2-C-Methyl-D-erythritol 4-phosphate (2)
2-Dehydro-3-deoxy-L-rhamnonate (2)
2-Hydroxybutane-1,2,4-tricarboxylate (2)
2-Hydroxyethanesulfonate (2)
2-Isopropylmaleate (2)
2-Oxoglutarate (2)
2-oxobut-3-enanoate (2)
2S-Hydroxytetradecanoic acid (2)
3,4-Dihydro-2H-Pyrrole-2-carboxylate (2)
3-(4-Hydroxyphenyl)lactate (2)
3-Methyl-2-oxobutanoic acid (2)
3-sulfopropanoate (2)
4,4'-Sulfonyldiphenol (2)
4-Hydroxy-4-methylglutamate (2)
4-Pyridoxate (2)

IsPrivate

False (1)

Modelling Approach

Machine learning (1)

Study type

Transcription profiling by array (25)
RNA-seq of coding RNA (17)
ChIP-seq (7)
Unknown experiment type (2)
DNA-seq (2)
Methylation profiling by high throughput sequencing (2)
Human - Single-cell sequencing (1)
Plant - High-throughput sequencing (1)
Methylation profiling by array (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of non coding RNA (1)

Release Date

2021 (157)
2022 (155)
2023 (149)
2020 (134)
2024 (129)
2025 (104)
2014 (92)
2018 (90)
2017 (88)
2015 (88)
2019 (83)
2013 (80)
2016 (79)
2012 (75)
2011 (67)
2009 (48)
2010 (46)
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2007 (20)
2026 (15)
2006 (14)
2005 (6)
2004 (5)
2003 (2)
2001 (2)
2002 (1)
2000 (1)
1999 (1)
1992 (1)

Lab affiliation

University of Edinburgh (2)
1 Department of Computer Science, Hanyang University, Seoul 04763, Republic of Korea 2 Institute for Artificial Intelligence Research, Hanyang University, Seoul 04763, Republic of Korea (1)
Biomedical & Life Sciences, Lancaster University, UK. (1)
Biopharmaceutical development, R&D, AstraZeneca, Cambridge, UK (1)
Chair in Infection and Global Health, Department of Infection Biology, Institute of Infection and Global Health, University of Liverpool, UK (1)
DZNE Munich Neuroproteomics Feodor-Lynen Str. 17 81377 Munich Germany (1)
Department of Aquatic Ecology, Eawag, Überlandstrasse 133, 8600 Dübendorf, Switzerland (1)
Department of Biochemistry and Molecular Biology, Bio21 Institute, The University of Melbourne, Parkville, Victoria, Australia (1)
Department of Medicine, Weill Cornell Medicine, New York, NY, USA (1)
Department of oncology UNIL CHUV Ludwig Institute for Cancer Research Lausanne (1)
FDA (1)
Genomic Medicine, Infection Biology, Lerner Research Institute, Cleveland Clinic (1)
Head of Proteomics & Metabolomics Facility (1)
Human Immunological Diseases Section, Laboratory of Clinical Immunology and Microbiology, Division of Intramural Research, NIAID, NIH, Department of Health and Human Services, Unites States Government (1)
Imperial College London (1)
Inserm UMR S 938, CRSA, Bât. Kourilsky, 34 Rue Crozatier, 75012 Paris, France. (1)
Institute of Cancer Research (1)
Leibniz Institute of Virology (LIV), Hamburg, Germany (1)
MRC Protein Phosphorylation and Ubiquitylation Unit, Sir James Black Centre, Dow Street, School of Life Sciences, University of Dundee, Dundee DD1 5EH, Scotland, UK (1)
Medical University of Vienna Center of Physiology and Pharmacology Department of Vascular Biology and Thrombosis Research Schwarzspanierstraße 17/I A- 1090 Vienna, Austria (1)
Oxford Centre for Diabetes, Endocrinology and Metabolism, University of Oxford, Oxford, UK (1)
Professor and Academic Senior Group Leader Queensland Brain Institute University of Queensland (1)
Proteomics program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200 Copenhagen, Denmark (1)
Queensland Brain Institute, Univerisity of Queensland (1)
School of Biological Sciences Victoria University of Wellington New Zealand (1)
School of Biological Sciences, Victoria University of Wellington, New Zealand (1)
School of Biosciences and Medicine, the University of Surrey, Guildford GU2 7XH, Surrey, UK Division of Immunology, Immunity to Infection and Respiratory Medicine, School of Biological Sciences, Manchester Institute of Biotechnology, Manchester Academic Health Sciences Centre, University of Manchester, Manchester M1 7DN, Greater Manchester, UK (1)
School of Cellular and Molecular Medicine University of Bristol BS8 1TD UK (1)
School of Cellular and Molecular Medicine, Faculty of Biomedical Sciences, University of Bristol, Bristol, BS81TD (1)
Signalling in Apicomplexan Parasites Laboratory, The Francis Crick Institute, London NW1 1AT, UK (1)

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Metabolomics and lipidomics reveal perturbation of sphingolipid metabolism by a novel anti-trypanosomal 3-(oxazolo[4,5-b]pyridine-2-yl)anilide

Trypanosoma brucei is the causative agent of human African trypanosomiasis, which is responsible for thousands of deaths every year. Current therapies are limited and there is an urgent need to develop new drugs. The anti-trypanosomal compound, 3-(oxazolo[4,5-b]pyridine-2-yl)anilide (OXPA), was init...

2017-10-09 | MTBLS360 | MetaboLights

Genome-wide maps of H3R2me2s in pro-B cells

We report the application of single-molecule-based sequencing technology for high-throughput profiling of H3R2me2s in mouse pro-B cells. We find that H3R2 symmetric dimethylation and H3K4 trimethylation colocalized throughout the genome of mouse pro-B cells. Examination of 2 different histone modifi...

ORGANISM(S): Mus musculus

2012-02-02 | E-GEOD-35316 | biostudies-arrayexpress

Neutron and X-ray analysis of the Fenna-Matthews-Olson photosynthetic antenna complex from Prosthecochloris aestuarii.

Not available

S-EPMC6404856 | biostudies-literature

Rapid, Homogenous, B-Alkyl Suzuki-Miyaura Cross-Coupling of Boronic Esters.

Not available

S-EPMC11399326 | biostudies-literature

Alpha-helices direct excitation energy flow in the Fenna Matthews Olson protein.

Not available

S-EPMC2040394 | biostudies-literature

Crystallization and preliminary X-ray analysis of cecropin B from Bombyx mori.