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MetabolomicsMetabolome of the Medicago truncatula symbiosome space, bacteroid, and nodule cytosol
This study characterizes the metabolome of the Medicago truncatula-Sinorhizobium meliloti symbiosis. Symbiosome space, bacteroid, and nodule cytosol fractions were isolated from 4-week-old root nodules and profiled by untargeted liquid chromatography-tandem mass spectrometry (LC-MS/MS). Polar metabo...
2026-08-19 | MTBLS15392 | MetaboLights
MetabolomicsMetabolomic analysis of alfalfa (Medicago sativa L.) root-symbiotic rhizobia responses under alkali stress
Alkaline salts (e.g., NaHCO3 and Na2CO3) causes more severe morphological and physiological damage to plants than neutral salts (e.g., NaCl and Na2SO4) due to differences in pH. The mechanism by which plants respond to alkali stress is not fully understood, especially in plants having symbotic relat...
2018-07-27 | MTBLS481 | MetaboLights
TranscriptomicsCell- and tissue-specific transcriptome analyses of Medicago truncatula root nodules
We used laser-capture microdissection (LCM) to isolate specific cells from the Medicago truncatula nodule meristem (M), the distal infection (DIZ), the proximal infection zone (PIZ), infected cells (IC) and uninfected cells (UIC) from the fixation zone. Based on Medicago GeneChips, we identified the...
ORGANISM(S): Medicago truncatula 
2013-05-29 | E-GEOD-43354 | biostudies-arrayexpress
TranscriptomicsHigh-throughput sequencing of small RNAs in Medicago truncatula
Medicago truncatula endogenous small RNAs The dataset contains Medicago truncatula Gaertn. cv. Jemalong endogenous small RNA sequences in the range 18-28 nucleotides. High-throughput Solexa/Illumina sequencing was carried out at the Sainsbury Laboratory, Norwich, UK. Please see www.illumina.com for...
ORGANISM(S): Medicago truncatula 
2009-11-09 | E-GEOD-13761 | biostudies-arrayexpress
TranscriptomicsGene expression data from phosphinothricin (PPT) treated Medicago truncatula root nodules
Nitrogen assimilation in plants is a tightly regulated process that integrates developmental and environmental signals. The legume-rhizobial symbiosis results in the formation of a specialized organ called root nodule, where the rhizobia fixes atmospheric nitrogen into ammonia. Ammonia is assimilate...
ORGANISM(S): Medicago truncatula 
2012-05-08 | E-GEOD-34155 | biostudies-arrayexpress
TranscriptomicsHigh-throughput pyrosequencing of miRNAs from Medicago truncatula nodules and roots
We have used deep sequencing of small RNAs from nodules and root apexes of the model legume Medicago truncatula, to identify 113 novel candidate miRNAs. These miRNAs (legume or Mt-specific) are encoded by 278 putative hairpin precursors in the M. truncatula genome. Several miRNAs are differentially ...
ORGANISM(S): Medicago truncatula 
2009-07-07 | E-GEOD-15438 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of seed coat of Medicago truncatula 10-36 days after pollination
Genes specifically or induced in seed coat of Medicago truncatula 10-36 days after pollination were identified by comparing with genes expressed in other organs.
ORGANISM(S): Medicago truncatula 
2008-09-18 | E-MEXP-1116 | biostudies-arrayexpress
TranscriptomicsMedicago truncatula wild-type and mutant plantlet roots treated with symbiotic lipochitooligosaccharides
This SuperSeries is composed of the following subset Series: GSE33636: Gene expression data from Medicago truncatula plantlet roots treated with symbiotic lipochitooligosaccharides (LCOs). GSE33637: Gene expression data from Medicago truncatula mutant plantlet roots treated with Myc-LCOs. Refer to i...
ORGANISM(S): Medicago truncatula 
2012-05-30 | E-GEOD-33638 | biostudies-arrayexpress
TranscriptomicsExpression data from Medicago truncatula roots treated with S. meliloti wild-type or exoA mutant bacteria, or auxin transport inhibitors
Publication title: Pseudonodule formation by wild type and symbiotic mutant Medicago truncatula in response to auxin transport inhibitors This SuperSeries is composed of the following subset Series: GSE27991: Expression data of Medicago truncatula Jemalong A17 roots treated with auxin transport inh...
ORGANISM(S): Medicago truncatula 
2011-03-25 | E-GEOD-28174 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Medicago truncatula time series of flower and pod development
To study the development of flowers and pods in Medicago truncatula, eight stages of flower and pod development (designated F1-F4 and P1-P4, respectively) were chosen for tissue harvesting. As a common reference, young but already fully developed leaves (corresponding to the third-distant node from ...
ORGANISM(S): Medicago truncatula 
2005-05-31 | E-MEXP-143 | biostudies-arrayexpress
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