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ProteomicsAn essential role for cullin 3 ubiquitin ligases and phototropin 2 turnover in seedling chloroplast development (de-etiolation)
Transgenic Arabidopsis seedlings RV86-5 (contains a dexamethasone-inducible ubiquitin variant that contains Arg instead of Lys at position 48; ̈Schlögelhofer et al., 2005) were surface-sterilized and sown on Uhelon 120T (Silk & Progress, Czech Republic) mesh placed on 1% (w/v) agar containing a half...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2022-05-04 | PXD012815 | Pride
Arabidopsis Development Protein turnover Phototropin 
ProteomicsRoles of proteome dynamics and cytokinin signaling in root-to-hypocotyl ratio changes induced by shading roots of Arabidopsis seedlings
Seeds of Arabidopsis thaliana ecotype Columbia (Col-0) were surface-sterilized (using 75 % ethanol) and sown on Murashige and Skoog medium (pH 5.7) supplemented with 3 mM morpholinoethane sulfonic acid, solidified with 1% (w/v) agar and stratified at 4 °C for 48 h. Petri dishes were covered by a lay...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2015-02-23 | PXD001612 | Pride
Arabidopsis thaliana Cytokinin Hypocotyl elongation Shaded root Light Proteome 
ProteomicsLight Quality Modulates Plant Cold Response and Freezing Tolerance
The cold acclimation process is regulated by many factors like ambient temperature, day length, light intensity, or hormonal status. Experiments with plants grown under different light-quality conditions indicate that the plant response to cold is also a light-quality-dependent process. Here, the ro...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2022-06-14 | PXD033102 | Pride
Phytophthora infestans  late blight  resistance  proteome  metabolome  lipidome  resistance markers 
ProteomicsMultifaceted activity of cytokinin at distinct phases of leaf development shapes its size and structure in Arabidopsis thaliana
To get an insight into cytokinin-induced alterations of molecular networks underlying size and structure of a leaf, transgenic Arabidopsis lines (Col-0 background) CaMV35S>GR>ipt, and CaMV35S>GR>HvCKX2 were cultivated in a growth chamber under controlled environmental conditions (50-60% relative hum...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-02-21 | PXD007678 | Pride
Arabidopsis Transcriptome Cytokinin Leaf development Proteome 
ProteomicsCold acclimation process under limited light conditions in Arabidopsis thaliana
Plants in temperate regions have evolved mechanisms to survive sudden temperature drops. Previous reports have indicated that the cold acclimation mechanism is light-dependent and does not fully operate under a low light intensity. In these studies, plants were grown under a long-day photoperiod and...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2021-07-08 | PXD025234 | Pride
Arabidopsis thaliana Acclimation Cytokinin Cold Metabolome Proteome Freezing stress Light 
ProteomicsProteomic analysis of sap reveals root-shoot communication dynamics in potato and barley following flg22 treatment
Potato (Solanum tuberosum, variety Princ) and barley (Hordeum vulgare, variety Sebastian) plants were cultivated in a controlled environment. Plants were grown in Potgrond H soil (Klasmann-Deilmann GmbH, Germany) under a 12-hour photoperiod with a constant temperature of 21 °C and a photon flux dens...
ORGANISM(S): Solanum tuberosum (Potato) Hordeum vulgare (Barley) 
2024-07-20 | PXD053406 | Pride
Extracellular proteins Exudates Xylem sap Flg22 
ProteomicsUnveiling Oak Endophyte Dynamics: Cadophora luteo-olivacea and Trichoderma atroviride from Pathogenicity Tests to Omics Insights
Pedunculate oak (Quercus robur) is a foundation tree species in European forests and reforestation programs, and forest nurseries represent key phytosanitary bottlenecks where asymptomatic planting stock can disseminate cryptic pathogens. Cadophora luteo-olivacea is frequently associated with grapev...
ORGANISM(S): Cadophora luteo-olivacea Trichoderma atroviride 
2026-02-10 | PXD073144 | Pride
Quercus robur  pedunculate oak  forest nurseries  trunk disease pathogens  cadophora luteo-olivacea  trichoderma atroviride  koch’s postulates  mycoparasitism  dual-culture  contact-zone proteomics  secretome  biocontrol 
ProteomicsEnvironment and its impact on barley grain composition
Grain samples of Hordeum vulgare L. sensu lato variety Sebastian were obtained from plants grown in the fields at four breeding stations in 2017, representing seed development under different combinations of temperature and rainfall.Sample description:CAS [1-4] - location n. 5 - (Caslav) - high yiel...
ORGANISM(S): Hordeum vulgare (Barley) 
2023-02-07 | PXD020324 | Pride
Temperature Longevity Seed Barley Drought 
ProteomicsFaecal Proteases and Immune Signatures Drive Subtype-Specific Enteric Neuronal Activation in IBS
Background: Luminal proteases have been implicated in epithelial barrier dysfunction and visceral hypersensitivity in irritable bowel syndrome (IBS), yet their impact on the enteric nervous system (ENS), the principal regulator of gastrointestinal function, remains unknown. We investigated whether ...
ORGANISM(S): Homo sapiens (Human) 
2026-09-10 | PXD071836 | Pride
Protease-activated receptors (pars) Irritable bowel syndrome Serine and cysteine protease activity Faecal supernatant proteomics Luminal–neuronal signalling axis 
UnknownPatterns of tropical forest understory temperatures.
Not available
S-EPMC10805846 | biostudies-literature
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