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ProteomicsMeta-proteomics analysis of microbial ecosystem during the anaerobic digestion of chicken manure in biogas production farm
Meta-proteomics analysis approach in the application of biogas production from anaerobic digestion has many advantages that has not been fully uncovered yet. This study aims to investigate biogas production from a stable 2-stage chicken manure fermentation system in chemical and biological perspecti...
ORGANISM(S): Clostridum phage CDHM6 Lactobacillus crispatus EX533959VC03 Methanoculleus sp. 
2021-02-08 | PXD022498 | Pride
Meta-proteomics analysis  chicken manure  metabolic pathway  2-stage fermentation system  ammonia inhibition 
ProteomicsMeta-Proteomics profiling of a four species biofilm
Microbial biofilms are omnipresent and implicated in a wide spectrum of areas ranging from bioremediation, food production and biomedical applications. To date little is understood about how biofilm communities develop and function on a molecular level, due to the complexity of these biological syst...
ORGANISM(S): Paenibacillus amylolyticus Xanthomonas retroflexus Microbacterium oxydans Stenotrophomonas rhizophila 
2017-12-04 | PXD006281 | Pride
Lc-ms/ms Drip flow reactor Biofilm Soil isolates Metaproteomics 
UnknownComprehensive proteomics and meta-analysis of COVID-19 host response.
Not available
S-EPMC10516886 | biostudies-literature
ProteomicsThe power of many: Combining published datasets to identify Alzheimer’s disease biomarkers in cerebrospinal fluid
This manuscript describes methodology for the meta-analysis of published proteomics datasets from multiple publications to mine for cerebrospinal fluid (CSF)-based diagnostic biomarkers for Alzheimer’s disease (AD).The identified biomarkers are then validated in an independent cohort analyzed in hou...
ORGANISM(S): Homo sapiens (Human) 
2023-02-16 | PXD022649 | Pride
Human Meta-analysis Cerebrospinal fluid Shotgun proteomics Lc-ms Alzheimer's disease Biomarker 
ProteomicsITS2 sequencing and targeted meta-proteomics of infant gut mycobiome reveal the functional role of Rhodotorula sp. during atopic dermatitis manifestation
Metagenomic and targeted meta-proteomics were used to investigate the mycobiome profile of the infant gut to identify proteins involved during atopic dermatitis manifestation in a Thai population-based birth cohort.
ORGANISM(S): Homo Sapiens (human) 
2021-09-14 | PXD027687 | JPOST Repository
UnknownA meta-proteomics approach to study the interspecies interactions affecting microbial biofilm development in a model community.
Not available
S-EPMC5705676 | biostudies-literature
UnknownMeta-analysis of published cerebrospinal fluid proteomics data identifies and validates metabolic enzyme panel as Alzheimer's disease biomarkers.
Not available
S-EPMC10140596 | biostudies-literature
UnknownImmune status assessment based on plasma proteomics with meta graph convolutional networks.
Not available
S-EPMC11983875 | biostudies-literature
ProteomicsProteomic analysis of protein ubiquitination events in human primary and metastatic colon adenocarcinoma tissues
Protein ubiquitination is essential for multiple physiological processes through regulating the stability or function of target proteins and has been found to play critical roles in human cancers. However, the protein ubiquitination profile of human metastatic colon adenocarcinoma tissue has not bee...
ORGANISM(S): Homo Sapiens 
2020-07-27 | PXD020597 |
UnknownSystematic review and meta-analysis of mass spectrometry proteomics applied to ocular fluids to assess potential biomarkers of age-related macular degeneration.
Not available
S-EPMC10717315 | biostudies-literature
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