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TranscriptomicsResponse of ethanologenic E coli strains LY180 and EMFR9 to furfural
The data explore the transcriptional response of strain LY180 and the furfural-resistant derivative EMFR9 to 0.5 g/L furfural LY180 and EMFR9 and differences in their expression profiles are described in Miller, E. N., L. R. Jarboe, L. P. Yomano, S. W. York, K. T. Shanmugam, and L. O. Ingram. 2009. ...
ORGANISM(S): Escherichia coli 
2010-05-06 | E-GEOD-17786 | biostudies-arrayexpress
ProteomicsA Novel High-Throughput Immunoaffinity LC-MS/MS Assay for P III-NP and other Fragments of Type III Procollagen in Human Serum
The amino-terminal propeptide of type III procollagen (P-III-NP) is used with IGF-I to detect the illicit use of growth hormone and to monitor growth hormone therapy. However, the only currently available assays for P-III-NP are immunoassays, which are not well harmonized. In addition, other fragmen...
ORGANISM(S): Homo Sapiens 
2024-10-28 | PXD052245 | panorama
TranscriptomicsToxicity of atrazine and nonylphenol in juvenile rainbow trout (Oncorhynchus mykiss): Effects on general health, disease susceptibility and gene expression
Atrazine (ATZ) and nonylphenol (NP) are commonly identified contaminants in aquatic habitats; however, relatively few studies have considered the impact of these endocrine disrupters on immune function. This study examined the immunotoxicological effects of ATZ and NP at multiple levels of biologic...
ORGANISM(S): Oncorhynchus mykiss 
2012-11-01 | E-GEOD-38726 | biostudies-arrayexpress
TranscriptomicsRNA expression for ethanologenic E coli strains LY180 and LY180 del yqhC in the absence and presence of furfural
The data explore the transcription of strain LY180 and the yqhC deletion mutant LY180 del yqhC without and with 0.5 g/L furfural. LY180 and LY180 del yqhC are described in Turner, PC, EN Miller, LR Jarboe, P Pharkya, KT Shanmugam, and LO Ingram. 2009. Escherichia coli YqhC regulates transcription of...
ORGANISM(S): Escherichia coli 
2010-08-24 | E-GEOD-17788 | biostudies-arrayexpress
UnknownComparing tuberculosis management under public and private healthcare providers: Victoria, Australia, 2002-2015.
Not available
S-EPMC5415803 | biostudies-literature
ProteomicsA proteogenomic atlas of the human neural retina
The human neural retina is enriched for alternative splicing, and it is estimated that more than 10% of variants associated with inherited retinal diseases (IRDs) alter splicing. Previous research mainly used short-read RNA-sequencing techniques to investigate retina-specific splicing and splicing f...
ORGANISM(S): Homo sapiens (Human) 
2024-10-17 | PXD045187 | Pride
Human Pacbio long-read rna-sequencing Proteogenomics Neural retina Msfragger Dda-pasef 
TranscriptomicsTranscriptome Analysis and Molecular Signature of Human Retinal Pigment Epithelium
The retinal pigment epithelium (RPE) is a polarized cell layer that is critical for photoreceptor function and survival. It’s unique relationship to the photoreceptors and its specific physiology makes the RPE a critical determinant of human vision. Therefore we performed global expression profil...
ORGANISM(S): Homo sapiens 
2010-04-28 | E-GEOD-18811 | biostudies-arrayexpress
TranscriptomicsAdaption of Dinoroseobacter shibae to anaerobic conditions
To unravel the adaptation strategies of D. shibae to anaerobic conditions in microaerobic to anaerobic parts of the ocean and to define the underlying regulatory network an anaerobic shift experiment in Salt-Water-Medium in a chemostate was established. Transcriptome analyses were used to investigat...
ORGANISM(S): Dinoroseobacter shibae 
2013-08-30 | E-GEOD-47445 | biostudies-arrayexpress
UnknownOptimal Prehospital Crystalloid Resuscitation Volume in Trauma Patients at Risk for Hemorrhagic Shock.
Not available
S-EPMC12718426 | biostudies-literature
UnknownAccepted Trichoderma names in the year 2015.
Not available
S-EPMC4681254 | biostudies-literature
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