Modi A A - OmicsDI

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Unknown (897)
Proteomics (41)
Transcriptomics (10)
Genomics (7)
Metabolomics (7)

Organisms

Homo sapiens (27)
Mus musculus (12)
Aspergillus niger (1)
Macaca mulatta (1)
Arabidopsis thaliana (1)
Bacteroides thetaiotaomicron VPI-5482 (1)
Caenorhabditis elegans (1)
Canis lupus familiaris (1)
Crocus sativus (1)
Drosophila melanogaster (1)
Equus asinus (1)
Hermetia illucens (1)
Lathyrus oleraceus (1)
Pectobacterium zantedeschiae (1)
Plasmodium yoelii yoelii 17XNL (1)
Poterioochromonas malhamensis (1)
Ralstonia pseudosolanacearum GMI1000 (1)
Rattus norvegicus (1)
Solanum lycopersicum (1)
Treponema (1)
uncultured Desulfobacterium sp. (1)

Organisms

Bacteria (1)

Repository

pride (38)
biostudies-arrayexpress (11)
MetaboLights (6)
ENA (5)
MassIVE (3)
EGA (1)
GNPS (1)

Tissue

Cell culture (5)
Blood serum (2)
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Extracellular vesicle (2)
Leaf (2)
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Adipose tissue (1)
Blood (1)
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Blood plasma (1)
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Colostrum (1)
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Disease

Breast cancer (2)
Gastric adenocarcinoma (2)
Alzheimer's disease (1)
Disease free (1)
Leishmaniasis (1)
Malaria (1)
Melanoma (1)
Parkinson's disease (1)

Technology Type

Mass Spectrometry (38)
Shotgun proteomics (25)
Bottom-up proteomics (6)
Mass spectrometry (4)
Affinity purification coupled with mass spectrometry proteomics (4)
Data-dependent acquisition (4)
Mass spectrometry assay (1)
NMR spectroscopy (1)
Affinity proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Gel-based experiment (1)
MSE (1)
SRM/MRM (1)
SWATH MS (1)

Instrument Platform

QTRAP 6500 (3)
Liquid Chromatography MS - negative - reverse phase (3)
Liquid Chromatography MS - positive - reverse phase (3)
LTQ Orbitrap (1)
MS:1000031 (1)
Bruker (1)
Direct infusion MS - negative (1)
Direct infusion MS - positive (1)
Liquid Chromatography MS - alternating - direct infusion (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2021 (10)
2022 (7)
2019 (6)
2025 (6)
2014 (5)
2012 (4)
2024 (4)
2026 (4)
2013 (3)
2023 (3)
2018 (3)
2017 (2)
2020 (1)
2015 (1)

CHEBI ID

CHEBI:10049 (2)
CHEBI:101085 (2)
CHEBI:109895 (2)
CHEBI:1109 (2)
CHEBI:12387 (2)
CHEBI:124991 (2)
CHEBI:131887 (2)
CHEBI:132448 (2)
CHEBI:134092 (2)
CHEBI:134281 (2)
CHEBI:134418 (2)
CHEBI:134454 (2)
CHEBI:134548 (2)
CHEBI:135654 (2)
CHEBI:135736 (2)
CHEBI:135893 (2)
CHEBI:135954 (2)
CHEBI:136623 (2)
CHEBI:137225 (2)
CHEBI:137271 (2)
CHEBI:137318 (2)
CHEBI:137728 (2)
CHEBI:139140 (2)
CHEBI:139536 (2)
CHEBI:141319 (2)
CHEBI:142243 (2)
CHEBI:142267 (2)
CHEBI:142273 (2)
CHEBI:142698 (2)
CHEBI:143298 (2)

Metabolite Name

1,1,1-Trichloroethane (2)
1,3,5-Trithiane (2)
1,3-Diphenylpropane (2)
10Z-Nonadecenoic acid (2)
2,2',4,4',5,6'-Hexabromodiphenyl ether (2)
2-Hexaprenyl-6-methoxyphenol (2)
2-Hydroxyestradiol-3-methyl ether (2)
3-(4-Hydroxy-3,5-diiodophenyl)lactic acid (2)
3-Iodothyronamine (2)
3-Oxotetradecanoyl-CoA (2)
3-Phosphoadenylylselenate (2)
3H-1,2-Dithiole-3-thione (2)
5-Chloroorsellinic acid (2)
5-Diphosphoinositol pentakisphosphate (2)
5-Methylthioribose (2)
Acarbose (2)
Acetoacetyl-CoA (2)
Acetyl-CoA (2)
Acrylyl-CoA (2)
Adrenorphin (2)
Alfentanil (2)
Aluminium octadecanoate (2)
Amantadine (2)
Aminopropylcadaverine (2)
Ammonium dihydrogenphosphate (2)
Arachidyl carnitine (2)
Behenoylglycine (2)
Butyryl-CoA (2)
Caffeine (2)
Cefalotin (2)

First Public Date

2026 (2)
2024 (2)
2015 (1)

Modification

4-tetrahydrothiazine-3-carboxylic acid (1)

Study type

Transcription profiling by array (8)
RNA-seq of coding RNA (2)
ChIP-seq (1)

Release Date

2022 (116)
2021 (111)
2023 (95)
2024 (94)
2025 (92)
2020 (70)
2019 (55)
2018 (55)
2016 (39)
2017 (33)
2014 (30)
2015 (28)
2013 (19)
2012 (18)
2026 (14)
2011 (10)
2010 (7)
2009 (7)
2008 (2)
2007 (2)
2006 (2)
2005 (2)
2004 (2)
2003 (1)
2002 (1)
2001 (1)
1999 (1)
1997 (1)

Lab affiliation

Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany (4)
Professor and Deputy Director Center for Systems Biology and Molecular Medicine Yenepoya Research Centre Yenepoya (Deemed to be University) University Road, Deralakatte Mangalore 575018, India (2)
Analytics Core Facility Essen, Chemische Biologie, Zentrum für Medizinische Biotechnologie, Fakultät für Biologie, Universität Duisburg-Essen, Universitätsstr. 2, 45117 Essen, Germany (1)
Beijing Municipal Key Laboratory of Child Development and Nutriomics, Capital Institute of Pediatrics, Beijing, China (1)
CNR ISPAAM , Proteomics, Metabolomics and Mass Spectrometry Laboratory, Institute for the Animal Production System in the Mediterranean Environment, National Research Council, 80055 Portici, Italy. (1)
Cancer Research UK Cambridge Institute, University of Cambridge, Robinson Way, Cambridge, CB2 0RE, UK (1)
Center for Molecular Medicine, University Medical Center Utrecht, Utrecht University, 3C584 CG Utrecht, The Netherlands (1)
Center for Systems Biology and Molecular Medicine (CSBMM) Yenepoya(Deemed to be University) Mangalore - 575018, India (1)
Center for Systems Biology and Molecular Medicine Yenepoya Research Centre Yenepoya (Deemed to be University) University Road, Deralakatte Mangalore 575018, India Phone: 0824-2204668 (Ext:2057) (1)
Center for Systems Biology and Molecular Medicine, Yenepoya (Deemed to be University), Mangalore 575018, India (1)
Center for Systems Biology and Molecular Medicine, Yenepoya University, Mangalore 575018 (1)
Center for Theragnosis, Korea Institute of Science and Technology, Republic of Korea (1)
Clinical and Health Sciences, Health and Biomedical Innovation , University of South Australia, Adelaide 5000, Australia (1)
Department of Biochemistry (1)
Department of Biochemistry and Molecular Biology, Faculty of Biology, National and Kapodistrian University of Athens, Panepistimiopolis, Athens, Greece; (1)
Department of Biophysics, All India Institute of Medical Sciences, New Delhi, Delhi, India (110029) (1)
Department of Chemistry and Biochemistry, Texas Tech University, Lubbock, TX (1)
Department of Chemistry, Korea University (1)
Department of Developmental and Cell Biology, University of California, Irvine, Irvine, CA 92697, USA. (1)
Department of Molecular, Cellular & Biomedical Sciences, University of New Hampshire, Durham, NH 03824, USA Chemical Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA. (1)
Division of Biotechnology, MELISA Institute, Concepción, Chile. (1)
Institute for Genetics and Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Joseph-Stelzmann-Strasse 26, 50931 Cologne, Germany. Center for Molecular Medicine (CMMC), University of Cologne, 50931 Cologne, Germany (1)
Institute of Microbiology, The Czech Academy of Sciences, BIOCEV, Prumyslova 595, 252 50 Vestec, Czech Republic, (1)
Laboratoire PRISM INSERM U-1192 Universite de Lille France (1)
Professor and Deputy Director, Center for Systems Biology and Molecular Medicine, Yenepoya Research Centre, Yenepoya (Deemed to be University), Mangalore, India (1)
Professor and Deputy Director, Center for Systems Biology and Molecular Medicine, Yenepoya Research Centre, Yenepoya (Deemed to be University), Mangalore, India (1)
Professor and Deputy Director, Center for Systems Biology and Molecular Medicine, Yenepoya Research Centre. Yenepoya (Deemed to be University), University Road, Deralakatte, Mangalore 575018, India (1)
Quadram Institute Research Park, Rosalind Franklin Rd, Norwich NR4 7UQ (1)
School of Biology, Aristotle University of Thessaloniki, 54124 Thessaloniki (1)
Seoul National University (1)

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Modi-2 a vaccine stimulating CD4 responses to homocitrullinated self epitopes as therapy for solid cancers.

Not available

S-EPMC11603156 | biostudies-literature

Trends in obesity across Canada from 2005 to 2018: a consecutive cross-sectional population-based study.

Not available

S-EPMC9259440 | biostudies-literature

Transcription profiling by array of primary human hepatocytes derived from hepatitis C patients treated with type III interferons (IFNs) for 6 or 24 hours

Recent identification of IL28B gene polymorphisms associated with hepatitis C virus (HCV) clearance suggests a role for type III interferons (IFNs) in hepatitis C infection. The function of type III IFNs in intrinsic antiviral immunity is poorly understood. Here we show that HCV infection of primar...

ORGANISM(S): Homo sapiens

2012-03-09 | E-GEOD-31193 | biostudies-arrayexpress

Estrogen Receptor β4 Regulates Chemotherapy Resistance and Induces Cancer Stem Cells in Triple Negative Breast Cancer.

Not available

S-EPMC10058198 | biostudies-literature

DIA data analysis with unambiguously determined precursor mass

Proteomics research today no longer simply seeks exhaustive protein identification; now, robust, large-scale quantitative information is sought. For this purpose, data-independent acquisition (DIA) has emerged as a promising strategy largely owing to the developments in advanced mass spectrometers a...

ORGANISM(S): Homo sapiens (Human)

2019-08-19 | PXD012744 | Pride

Precursor mass Dia

Deciphering metabolomic alterations in seminal plasma of crossbred (Bos taurus X Bos indicus) bulls through comparative deep metabolomic analysis

The incidence of sub-fertility is higher in crossbred bulls compared to zebu bulls. In the present study, we analysed the metabolomic profile of seminal plasma from crossbred and zebu bulls and uncovered differentially expressed metabolites between these two breeds. Using a high-throughput LC-MS/MS-...

2021-12-22 | MTBLS1642 | MetaboLights

Varied Responses to a High m.3243A>G Mutation Load and Respiratory Chain Dysfunction in Patient-Derived Cardiomyocytes.

Not available

S-EPMC9406376 | biostudies-literature

Validity of the diagnostic criteria for chronic cerebrospinal venous insufficiency and association with multiple sclerosis.

Not available

S-EPMC4119167 | biostudies-literature

An Assessment of the Longitudinal Construct Validity of the Pain Behavioral Scale (PaBS) in a Saudi Population with Chronic Low Back Pain: A Preliminary Study.

Not available

S-EPMC10297879 | biostudies-literature

In vivo and ex vivo confocal endomicroscopy of pancreatic cystic lesions: A prospective study.

Not available