Mouse plasma dia

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Proteomics (101)
Transcriptomics (44)
Metabolomics (5)
Genomics (4)
Unknown (2)

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Schizosaccharomyces pombe (86)
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Oryza sativa Indica Group (86)
Sinorhizobium meliloti BL225C (86)
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Physcomitrium patens (86)
Methylohalobius crimeensis 10Ki (86)
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Ophrys x arachnitiformis subsp. archipelagi (86)
Mus musculus (47)
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cellular organisms (1)
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Repository

pride (86)
biostudies-arrayexpress (48)
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Tissue

Blood plasma (40)
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Gastrocnemius (1)
Extracellular exosome (1)
Prefrontal cortex (1)
Tissue (1)
Hypothalamus (1)

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Apparently healthy (2)
Cardiovascular system disease (2)
Glycogen storage disease (1)
Obstructive sleep apnea (1)
Liver inflammation (1)
Inflammation (1)
Type 1 diabetes mellitus (1)
Fatty liver disease (1)
Huntington Disease (1)
Metabolic dysfunction-associated steatotic liver disease (1)
Atherosclerosis (1)
Parkinson's disease (1)
Chronic kidney disease (1)
Myocardial ischemia (1)
Bacterial sepsis (1)
Pulmonary fibrosis (1)
Trypanosomiasis (1)
Type 2 diabetes mellitus (1)
Colon cancer (1)
Acute leukemia (1)

Technology Type

Mass Spectrometry (86)
Data-independent acquisition (37)
SWATH MS (30)
Bottom-up proteomics (23)
Shotgun proteomics (18)
Mass spectrometry (4)
Data-dependent acquisition (3)
Mass spectrometry assay (2)
All-ion fragmentation (2)
DiaPASEF (1)
Affinity purification coupled with mass spectrometry proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (3)
Direct infusion MS - negative (2)
Direct infusion MS - positive (2)
Liquid Chromatography MS - negative - reverse phase (2)
NextSeq 500 (1)
Q Exactive (1)
Orbitrap Exploris 480 (1)
Orbitrap Fusion Lumos (1)

Publication Date

2026 (26)
2025 (21)
2024 (18)
2023 (14)
2010 (10)
2022 (9)
2015 (8)
2016 (6)
2012 (5)
2011 (5)
2021 (5)
2019 (5)
2013 (4)
2018 (3)
2014 (3)
2009 (3)
2008 (2)
2007 (1)
2017 (1)
2020 (1)

Metabolite Name

TAG 10:0-16:0-16:0 (1)
PE(0:0/18:3(6Z,9Z,12Z)) (1)
PI(O-20:0/22:4(7Z,10Z,13Z,16Z)) (1)
PIM1(18:0/14:0) (1)
Isocaviunin 7-O-gentiobioside (1)
PHOHA-PA (1)
PI(O-20:0/20:3(8Z,11Z,14Z)) (1)
Viscumneoside V (1)
PS(21:0/0:0) (1)
PE(0:0/20:5(5Z,8Z,11Z,14Z,17Z)) (1)
OG-PE (1)
Phenylamil (1)
PE(22:5(4Z,7Z,10Z,13Z,16Z)/0:0) (1)
PC(22:4(7Z,10Z,13Z,16Z)/0:0) (1)
Palmitoleic Acid ethyl ester (1)
1,25-Dihydroxy-24-oxo-16-ene-vitamin D3 (1)
3,7-Dihydroxy-8-methylflavone 7-rhamnosyl-(1->4)-rhamnosyl-(1->6)-glucoside (1)
Coumestrol 3-O-glucoside (1)
PHOHA-PE (1)
PA(20:1(11Z)/0:0) (1)
O-BENZYL-l-SERINE (1)
Flumazenil acid (1)
2-amino-4-({1-[(carboxymethyl)-C-hydroxycarbonimidoyl]-2-[(2-{3,5-dihydroxy-4-[(1E)-3-methylbut-1-en-1-yl]phenyl}-2-hydroxy-1-(4-hydroxyphenyl)ethyl)sulfanyl]ethyl}-C-hydroxycarbonimidoyl)butanoic acid (1)
PHOOA-PS (1)
OKOHA-PE (1)
PS(19:0/0:0) (1)
(R)-S-lactoylglutathionate(1-) (1)
Zopiclone (1)
PC(22:5(7Z,10Z,13Z,16Z,19Z)/0:0) (1)
PE(20:5(5Z,8Z,11Z,14Z,17Z)/0:0) (1)

Study type

Transcription profiling by array (33)
RNA-seq of coding RNA (7)
ChIP-seq (3)
ChIP-chip by array (2)
Unknown experiment type (1)
Hi-C (1)
DNA-seq (1)

Release Date

2010 (10)
2015 (7)
2016 (6)
2012 (5)
2011 (5)
2013 (4)
2014 (3)
2009 (3)
2018 (2)
2008 (2)
2007 (1)
2025 (1)
2020 (1)

Lab affiliation

Ruhr University Bochum, Medical Faculty, Medizinisches Proteom-Center (3)
Department of Biomedical Sciences, University of Copenhagen (3)
Markus Ralser, Prof. Dr. Einstein Professor of Biochemistry Head, Institute of Biochemistry, Charité University Medicine, Berlin markus.ralser@charite.de Senior Group Leader, The Francis Crick Institute, London markus.ralser@crick.ac.uk (2)
Max-Planck-Institute for Biology of Ageing Joseph-Stelzmann-Str. 9b 50931 Cologne, Germany (2)
IRCCS Istituto G Gaslini (2)
Molecular Immune and Cell Biology Laboratory of Molecular Immunology Life and Medical Sciences Institute (LIMES), University of Bonn, Carl-Troll-Str.31, 53115 Bonn, Germany (1)
Department of Otolaryngology, Head and Neck Surgery, Children’s Hospital Capital Institute of Paediatrics (1)
Institution of Plant and Microbial Biology, Academia Sinica, Taipei (1)
University of Groningen, University Medical Center Groningen, Department of Cardiology, The Netherlands, Hanzeplein 1, 9713 GZ, Groningen, the Netherlands (1)
lushuaiyao's lab, Chinese academic and medical colledge&peking union medical colledge, institute of medical biology (kunming, Yun nan Province) (1)
Ruhr University Bochum Medical Faculty Medizinisches Proteom-Center (1)
Biomarker Assay Development 1 Novo Nordisk Park 1 Måløv, Denmark (1)
Shenzhen Institute of Advanced Technology,Chinese Academy of Sciences (1)
Department I of Internal Medicine, Cologne, Germany (1)
Institute of Biochemistry, Christian-Albrechts-University Kiel, Kiel, Germany (1)
NNF Center for Protein Research, Faculty of Health Sciences, University of Copenhagen, Copenhagen, Denmark; 2Department of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany; 1NNF Center for Protein Research, Faculty of Health Sciences, University of Copenhagen, Copenhagen, Denmark; Department of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany; (1)
CECAD and Institute for Genetics Joseph-Stelzmann Straße 26 University of Cologne, Cologne, Germany (1)
Einstein Professor of Biochemistry Head, Institute of Biochemistry, Charité Universitätsmedizin Berlin, Germany markus.ralser@charite.de Senior Group Leader, The Francis Crick Institute, London, UK markus.ralser@crick.ac.uk (1)
Department of Pediatrics, University of Groningen, University Medical Center Groningen; Groningen, The Netherlands (1)
Department of Clinical Sciences, Lund Division of Infection Medicine Sweden (1)
Department of Child Health and Child Health Research Institute, School of Medicine, University of Missouri, Columbia, MO, United States (1)
Chair, Department of Metabolism and Nutritional Programming Van Andel Institute (1)
Lab head, Director Proteomics Group, Institute for Systems Biology (ISB), Seattle, WA, USA (1)
John van Geest Cancer Research Centre, Nottingham Trent University (1)
Division of Infection Medicine, BMC Faculty of Medicine Lund University Lund, Sweden (1)
Associate Professor, Neurology UCSF Weill Institute for Neurosciences School of Medicine University of California, San Francisco (1)
Cell Signalling and Immunology, School of life Sciences, University of Dundee (1)
Dept. of Bioloy, University of Rome Tor Vergata (1)
Helmholtz Zentrum München - German Research Center for Environmental Health, Institute of Radiation Biology, Neuherberg, Germany (1)
Project Group Leader Dept. of Proteomics and Signal Transduction Max Planck Institute of Biochemistry (1)

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Mouse organ specific spectral library and DIA analysis of the plasma proteome

The plasma proteome is highly dynamic and variable, composed of proteins derived from surrounding tissues and cells. To investigate the complex processes that contribute to the plasma proteome homeostasis we developed a mass spectrometry based proteomics strategy to infer the origin of proteins dete...

ORGANISM(S): Mus Musculus (ncbitaxon:10090)

2017-11-08 | MSV000081695 | MassIVE

Mouse organ specific spectral library and DIA analysis of the plasma proteome

ORGANISM(S): Mus musculus (Mouse)

2015-11-23 | PXD002896 | Pride

Analysis of novel plasma protein biomarkers in sepsis using DIA mass spectrometry

This study used DIA mass spectrometry to identify novel plasma protein biomarkers for sepsis, aiming to search for new diagnostic targets for sepsis and after administration of atorvastatin and vitamin D.

ORGANISM(S): Mus musculus (Mouse)

2026-04-13 | PXD060677 | Pride

protein biomarkers Epsis dia plasma

Fenofibrate increases VLDL-triglyceride production despite reducing plasma triglyceride levels in APOE*3-Leiden.CETP mice

The PPAR? activator fenofibrate efficiently decreases plasma triglycerides (TG), which is generally attributed to enhanced VLDL-TG clearance and decreased VLDL-TG production. However, since data on the effect of fenofibrate on VLDL production are controversial, we aimed to investigate in (more) deta...

ORGANISM(S): Mus musculus

2010-05-27 | E-GEOD-21211 | biostudies-arrayexpress

DIATAGeR: Triacylglycerol Annotation of Data-Independent Acquisition based Lipidomics

Triacylglycerols (TGs) are the most abundant lipids in the human body and the primary source of energy storage. Altered TGs are implicated in metabolic syndrome and detailed structural information may provide novel insights into diseases pathology. TGs are comprised of three fatty acyls with vari...

2025-03-04 | MTBLS11927 | MetaboLights

Plasma proteome profiling discovers novel proteins associated with non-alcoholic fatty liver disease

Non-alcoholic fatty liver disease (NAFLD) affects 25% of the population and can progress to cirrhosis, where treatment options are limited. As the liver secrets most of the blood plasma proteins, its diseases should affect the plasma proteome. Plasma Proteome Profiling of 48 patients with cirrhosis ...

ORGANISM(S): Mus musculus (Mouse)

2019-03-05 | PXD012056 | Pride

Mass spectrometry Biomarker discovery Plasma proteome profiling Nafld Nash

Nanoparticle-enabled plasma proteomics of a preclinical atherosclerosis model reveals common signatures with human disease

Coronary heart disease (CHD) accounts for one-third of deaths in the United States, with an annual economic burden exceeding $400 billion. Elevated plasma levels of low-density lipoprotein-cholesterol (LDL-C) is a major risk factor for CHD, through its promotion of atherosclerosis. Mutations in the ...

ORGANISM(S): Mus musculus (Mouse)

2026-08-20 | PXD063218 | Pride

Plasma Atherosclerosis Dia Nanoparticle Proteomics

Plasma proteomics in mouse sepsis

Analysis of plasma proteomes from 8 week old C57BL/6J WT or TCRα-/- (Tcratm1Phi) either naïve or infected by intravenous injection of 5x105 yeast (clinical isolate SC5314), and collected 72 hrs post-infection

ORGANISM(S): Mus musculus (Mouse)

2022-11-26 | PXD037676 | Pride

Mice plasma proteomics sepsis

DIA-MS based plasma peptidomics workflow for profiling organ-derived peptides

In this study, we acquired DDA-MS data and DIA-MS data from peptide extracts of plasma and eleven organs (lung, spleen, adrenal gland, kidney, heart, liver, muscle, pancreas, cerebellum, hippocampus, and cerebral cortex). These data were analyzed using FragPipe v23 to obtain peptide identification r...

ORGANISM(S): Mus Musculus (mouse)

2026-07-13 | PXD073758 | JPOST Repository

Plasma proteomics of mice treated with BACE inhibitors

The Beta-secretase BACE1 is a central drug target for Alzheimer’s disease. Clinically tested, BACE1-directed inhibitors also block the homologous protease BACE2. Yet, little is known about physiological BACE2 substrates and functions in vivo. To discover potential BAC2 substrates in plasma, mice wer...

ORGANISM(S): Mus musculus (Mouse)

2024-06-27 | PXD042669 | Pride

Bace Plasma Mus musculus

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156 Results

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