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MetabolomicsSystematic analyses of lipid mobilization by human lipid transfer proteins

Lipid transfer proteins (LTPs) maintain the specialised lipid compositions of biological membranes, and many are associated with disease. In eukaryotes, they support organellar functions by transporting lipids between compartmentalised metabolic pathways. However, for the majority of the hundreds...

2025-11-14 | MTBLS9567 | MetaboLights
TranscriptomicsBovine pre-transfer endometrium and embryo transcriptome fingerprints as predictors of pregnancy success after embryo transfer (endometrial study)
The aberrant gene expression in the uterine endometrium and embryo has been the major causes of pregnancy failure in cattle. Therefore, selecting cows having adequate endometrial receptivity and embryos of better developmental competence based on the gene expression could increase the number of calv...
ORGANISM(S): Bos taurus 
2010-04-07 | E-GEOD-20974 | biostudies-arrayexpress
ModelsFirczuk2013 - Eukaryotic mRNA translation machinery
Firczuk2013 - Eukaryotic mRNA translation machinery This is a model of Saccharomyces cerevisiae mRNA translation which includes the initiation, elongation and termination phases. The model is for 20 condon mRNAs. The building of a multi-factor complex in initiati...
2024-09-02 | BIOMD0000000457 | BioModels
ProteomicsPytheas SARS-CoV-2 spike protein mRNA sample analysis
Mass spectrometry remains an important method for analysis of modified nucleosides ubiquitously present in cellular RNAs, in particular for ribosomal and transfer RNAs that play crucial roles in mRNA translation and decoding. Furthermore, modifications have effect on the lifetimes of nucleic acids i...
ORGANISM(S): Escherichia coli 
2022-05-04 | PXD030845 | Pride
Isotope labeling Sars-cov-2 spike protein Pytheas Mrna 
TranscriptomicsResponse of Saccharomyces cerevisiae to a rapid transfer from a fermentable to a nonfermentable carbon source.
The global gene expression program that accompanies the adaptation of Saccharomyces cerevisiae to an abrupt transfer from a fermentable to a nonfermentable carbon source was characterized by using a cDNA microarray to monitor the relative abundances and polysomal distributions of mRNAs. Features of ...
ORGANISM(S): Saccharomyces cerevisiae 
2005-08-25 | E-GEOD-3190 | biostudies-arrayexpress
ProteomicsMpe1 senses the polyadenylation signal in pre-mRNA to promote efficient cleavage and control polyadenylation
Crosslinking mass spectrometry dataset of the Mpe1 and Cft2 bound to the yeast CPF polymerase module. Sulfo-SDA is the crosslinker used.
ORGANISM(S): Saccharomyces Cerevisiae (baker's Yeast) 
2023-01-12 | PXD027482 | JPOST Repository
TranscriptomicsTranscriptome sequencing of nasopharyngeal carcinoma model system (miRNA)
Nasopharyngeal carcinoma (NPC) is a prevalent malignancyt disease in Southeast Asia among the Chinese population. Aberrant regulation of transcripts has been implicated in many types of cancers including NPC. Herein, we characterized mRNA and miRNA transcriptomes by RNA sequencing (RNASeq) of NPC mo...
ORGANISM(S): Homo sapiens 
2014-02-05 | E-GEOD-54161 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of individual bovine nuclear transfer blastocysts
Individual zona free in vitro grown bovine day 7 blastocysts were compared to stage and quality matched nuclear transfer derived blastocysts (fibroblast donor cells).
ORGANISM(S): Bos taurus 
2006-02-14 | E-MEXP-556 | biostudies-arrayexpress
ProteomicsSANS (USH1G) regulates pre-mRNA splicing by mediating the intra-nuclear transfer of tri-snRNP complexes
Splicing is catalyzed by the spliceosome, a compositionally dynamic complex assembled stepwise on pre-mRNA. We reveal links between splicing machinery components and the intrinsically disordered ciliopathy protein SANS. Pathogenic mutations in SANS/USH1G lead to Usher syndrome––the most common cause...
ORGANISM(S): Homo sapiens (Human) 
2021-05-25 | PXD023942 | Pride
Intra-nuclear transport Cajal bodies Ciliopathy Spliceosome Nuclear speckles Alternative splicing Usher syndrome 
GenomicsLateral transfer of mRNA by migrasomes modifies the recipient cell
Lateral transfer of mRNA by migrasomes modifies the recipient cell
PRJNA541291 | ENA
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