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ModelsMuraro2011_Cytokinin-Auxin_CrossRegulation
This model is from the article: The influence of cytokinin-auxin cross-regulation on cell-fate determination in Arabidopsis thaliana root development Muraro D, Byrne H, King J, Voss U, Kieber J, Bennett M. J Theor Biol.2011 Aug 21;283(1):152-67. PMID: 21640126, ...
2024-09-02 | BIOMD0000000416 | BioModels
TranscriptomicsscRNA-seq to investigate endoderm differentiation from induced human pluripotent stem cells
Single-cell RNA-seq (scRNA-seq) on nocodazole and DMSO treated cells before and after differentiation into endoderm. hPSC colonies were treated with DMSO or 100ng/ml nocodazole for 16 hours and induced to differentiate into definitive endoderm for three days. Single cells were subsequently collected...
ORGANISM(S): Homo sapiens 
2019-02-09 | E-MTAB-7008 | biostudies-arrayexpress
ModelsMuraro2014 - Vascular patterning in Arabidopsis roots
Muraro2014 - Vascular patterning in Arabidopsis roots Using a multicellular model, maintanence of vascular patterning in Arabidopsis roots has been studied. The model that is provided here is the single-cell version of the model. The two-cell and multicellular models described in t...
2024-09-02 | BIOMD0000000522 | BioModels
TranscriptomicsSingle-cell RNA sequencing of the human biliary tree
scRNA-seq of intrahepatic and extrahepatic (common bile duct and gallbladder) adult primary human cholangiocytes
ORGANISM(S): Homo sapiens 
2021-03-12 | E-MTAB-8495 | biostudies-arrayexpress
TranscriptomicsSingle-cell RNA-seq of fetal liver and bile duct organoids to investigate human fetal liver development
scRNAseq of primary fetal liver (6 post conceptional weeks), fetal biliary organoids, hepatoblast organoids, hepatoblast organoids after withdrawl of Wnt and transfer to hepatozyme medium, hepatoblast organoids after TGFb treatment.
ORGANISM(S): Homo sapiens 
2022-05-04 | E-MTAB-7189 | biostudies-arrayexpress
TranscriptomicsSingle-cell RNA sequencing of mouse Naïve State and Epiblast Stem Cell like cells
scRNA-seq of mouse embryonic stem cells (mESC) derived from four different genetic backgrounds grown in ground state conditions and differentiated towards an epiblast stem cell like (EpiSCL) population.
ORGANISM(S): Mus musculus 
2020-12-15 | E-MTAB-8844 | biostudies-arrayexpress
TranscriptomicsSingle-cell RNA sequencing of human liver development and hiPSC models
scRNA-seq of primary human adult liver, primary human fetal liver (5 post conceptional weeks), EPCAM+ MACS sorted primary human intrahepatic duct cholangiocytes, sequential timepoints of hiPSC-derived hepatocyte-like cells (HLC), sequential timepoints of hiPSC-derived cholangiocyte-like cells (CLC),...
ORGANISM(S): Homo sapiens 
2022-05-04 | E-MTAB-8210 | biostudies-arrayexpress
TranscriptomicsSingle-cell RNA sequencing of hPSC-derived endothelial-to-haematopoietic transition
scRNAseq of sequential time points and CDKi-treated samples during endothelial-to-haematopoietic transition in cells derived by hPSC differentiation.
ORGANISM(S): Homo sapiens 
2020-07-31 | E-MTAB-8205 | biostudies-arrayexpress
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