Nagarajan R R - OmicsDI

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Unknown (430)
Transcriptomics (29)
Genomics (29)
Proteomics (6)
Models (3)
Metabolomics (3)

Organisms

Homo sapiens (43)
Mus musculus (8)
Thermotoga maritima MSB8 (3)
Escherichia coli K-12 (2)
Geobacter metallireducens (1)
Phocaeicola vulgatus (1)
mixed culture KAZ_0815 (1)
Staphylococcus aureus (1)
Oncorhynchus mykiss (1)
Plasmodium falciparum (1)
Clostridioides difficile (1)
Saccharomyces cerevisiae (1)
Streptococcus pneumoniae R6 (1)

Repository

biostudies-arrayexpress (31)
EGA (27)
pride (6)
BioModels (3)
GNPS (3)

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Cell culture (2)
Brain (1)
Breast cancer cell (1)
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Cell suspension culture (1)
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Pancreatic adenocarcinoma cell line (1)

Disease

Breast cancer (3)
Lymphoma (1)
Pancreatic cancer (1)

Technology Type

Mass Spectrometry (6)
Affinity purification coupled with mass spectrometry proteomics (3)
Shotgun proteomics (2)
Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, HiSeq X Ten, Illumina HiSeq 2500, ILLUMINA (1)
Illumina HiSeq 2000, Illumina Infinium HumanMethylation450 BeadChip, Affymetrix expression array, ILLUMINA (1)
Illumina HiSeq 2500 (1)
Bottom-up proteomics (1)
Top-down proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (2)
LTQ FT (2)
Q Exactive Plus (1)

Publication Date

2013 (7)
2016 (5)
2014 (5)
2008 (4)
2023 (3)
2012 (3)
2010 (3)
2025 (2)
2024 (2)
2026 (2)
2011 (2)
2019 (2)
2015 (1)
2009 (1)
2021 (1)

UNIPROT ID/AC

P42212 (1)

IsPrivate

False (3)

Submitter Keywords

FROG (2)

Modelling Approach

Constraint-based model (2)
Ordinary differential equation model (1)

Study type

Transcription profiling by array (17)
RNA-seq of coding RNA (4)
Transcription profiling by tiling array (2)
RNA-seq of total RNA (2)
ChIP-chip by array (1)
Genotyping by array (1)
Comparative genomic hybridization by array (1)
Other (1)
DNA-seq (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2022 (54)
2021 (50)
2025 (48)
2023 (38)
2020 (38)
2024 (36)
2015 (25)
2014 (21)
2019 (21)
2016 (19)
2017 (18)
2013 (16)
2012 (13)
2010 (12)
2009 (10)
2018 (10)
2008 (9)
2026 (8)
2011 (8)
2006 (3)
2005 (1)
2003 (1)
2002 (1)
1997 (1)

Lab affiliation

Cancer Research UK University of Cambridge Li Ka Shing Centre Robinson Way Cambridge, CB2 0RE (1)
Cancer Research UK, University of Cambridge, Li Ka Shing Centre, Robinson Way, Cambridge, CB2 0RE (1)
Division head B230 Proteomics of Stem Cells and Cancer (1)
GlaxoSmithKline (GSK) (1)
Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark (1)
Science for Life Laboratory, Department of Immunology, Genetics and Pathology, Uppsala University, Sweden (1)

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Human Antigen R -mediated modulation of Transforming Growth Factor Beta 1 expression in retinal pathological milieu.

Not available

S-EPMC11372609 | biostudies-literature

Differentially expressed tRFs in CD5 positive relapsed & refractory diffuse large B cell lymphoma and the bioinformatic analysis for their potential clinical use.

Not available

S-EPMC6882323 | biostudies-literature

The complete mitochondrial genome of Indian gaur, Bos gaurus and its phylogenetic implications.

Not available

S-EPMC7371690 | biostudies-literature

Neuroimaging abnormalities, neurocognitive function, and fatigue in patients with hepatitis C.

Not available

S-EPMC4299885 | biostudies-literature

A new blood-based RNA signature (R₉), for monitoring effectiveness of tuberculosis treatment in a South Indian longitudinal cohort.

Not available

S-EPMC8800112 | biostudies-literature

Chromatin immunoprecipitation to map nucleosomes and H3 lysine 14 acetylation in two unrelated strains of yeast

Nucleosome mapping and histone H3 lysine 14 acetylation chromatin immuno-precipitation in two unrelated strains of yeast (BY and RM).

ORGANISM(S): Saccharomyces cerevisiae

2009-08-29 | E-MEXP-1777 | biostudies-arrayexpress

Evidence for independent domestication of sheep mtDNA lineage A in India and introduction of lineage B through Arabian sea route.

Not available

S-EPMC8492717 | biostudies-literature

N-Acyl Homoserine Lactone Analog Modulators of the Pseudomonas aeruginosa Rhll Quorum Sensing Signal Synthase.

Not available

S-EPMC6948153 | biostudies-literature

Transcriptome analysis of Thermotoga maritima under multiple growth conditions [tiling array]

Investigation of transcripts (boundary, level, etc.) across the entire T. maritima genome in mulitple growth conditions, including logphase, late exponential, heat shock and hydrogen inhibited conditions. The new genome annotation has been approved by Genbank [CP004077, pending release of the manus...

ORGANISM(S): Thermotoga maritima MSB8

2013-08-02 | E-GEOD-37391 | biostudies-arrayexpress

Enhanced activity and stability of organophosphorus hydrolase via interaction with an amphiphilic polymer.

Not available

S-EPMC4059822 | biostudies-literature

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