Nair P P - OmicsDI

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Organisms

Homo sapiens (79)
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Vibrio cholerae O1 biovar El Tor str. N16961 (1)

Organisms

Homo sapiens (3)
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Repository

biostudies-arrayexpress (100)
pride (40)
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Mass Spectrometry (40)
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MSE (2)
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Instrument Platform

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2012 (25)
2016 (15)
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2005 (1)

UNIPROT ID/AC

B2RSH2 (2)
P05132 (2)
P12849 (2)
P48453 (2)
P48455 (2)
P49615 (2)
P62137 (2)
P62204 (2)
P62874 (2)
P63213 (2)
P63328 (2)
P63330 (2)
P68181 (2)
P84309 (2)
Q01063 (2)
Q60829 (2)
Q63810 (2)
Q63811 (2)
Q6P1F6 (2)
Q76MZ3 (2)
Q8CA95 (2)
Q8CGK7 (2)
Q9DBC7 (2)
Q9ERT9 (2)
P32211 (1)
P61168 (1)
Q60613 (1)
Q61616 (1)

CHEBI ID

CHEBI:15422 (2)
CHEBI:15996 (2)
CHEBI:16027 (2)
CHEBI:17489 (2)
CHEBI:17552 (2)
CHEBI:18243 (2)
CHEBI:29108 (2)
CHEBI:15355 (1)
CHEBI:16335 (1)
CHEBI:10037 (1)
CHEBI:132628 (1)
CHEBI:143762 (1)
CHEBI:145828 (1)
CHEBI:149838 (1)
CHEBI:15361 (1)
CHEBI:15428 (1)
CHEBI:16119 (1)
CHEBI:16449 (1)
CHEBI:16454 (1)
CHEBI:16786 (1)
CHEBI:168450 (1)
CHEBI:16870 (1)
CHEBI:168762 (1)
CHEBI:169042 (1)
CHEBI:17234 (1)
CHEBI:173158 (1)
CHEBI:173885 (1)
CHEBI:174300 (1)
CHEBI:175196 (1)
CHEBI:175244 (1)

Metabolite Name

(6beta,8alpha)-6-Hydroxy-7(11)-eremophilen-12,8-olide (1)
2,3-dihydroxypropyl hexadecanoate (1)
2-Octenoylcarnitine CAR(8:1) (1)
5,8-Dihydroxy-3,5,8-trimethyl-4a,5,6,7,7a,8,9,9a-octahydroazuleno[6,5-b]furan-2(4H)-one (1)
Acetate (1)
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Limocitrin (1)
Lucidenic acid L (1)
Lucidone C (1)
Methyl 4-hydroxycinnamate (1)
Methyl gallate (1)
Methylnissolin-3-O-glucoside (1)
N-cis-Feruloyltyramine (1)

IsPrivate

False (4)

First Public Date

2017 (2)
2018 (1)
2014 (1)

Modelling Approach

Ordinary differential equation model (4)

Study type

Transcription profiling by array (75)
Comparative genomic hybridization by array (7)
RNA-seq of coding RNA (7)
Unknown experiment type (3)
ChIP-seq (3)
Methylation profiling by array (3)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2021 (302)
2022 (283)
2023 (279)
2025 (264)
2024 (235)
2020 (208)
2019 (144)
2018 (135)
2017 (92)
2016 (89)
2015 (89)
2014 (75)
2012 (66)
2013 (46)
2011 (44)
2026 (43)
2010 (39)
2008 (22)
2009 (16)
2007 (7)
2005 (6)
2006 (3)
2002 (3)
2004 (2)
2000 (1)

Lab affiliation

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN 55905 (2)
Institute of Bioinformatics , International Technology Park, Bangalore, India (2)
McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205 USA (2)
Assistant Professor, Mass spectrometry Facility, Canadian Centre for Health and Safety in Agriculture, College of Medine, University of Saskatchewan. (1)
Center for Systems Biology and Molecular Medicine, Yenepoya Research Center, Yenepoya (Deemed to be University), Mangalore, India (1)
Chair of Proteomics and Bioanalytics, TU Munich (1)
Chemical & Biomolecular Engineering, Johns Hopkins University (1)
Conway Institute Research Fellow Special Lecturer in Clinical Pharmacology School of Medicine, University College Dublin, Belfield, Dublin 4, Ireland. (1)
Department of Biochemistry and Microbiology, L-Probe Lab Ghent University (1)
Department of Laboratory Medicine and Pathology Mayo Clinic Rochester, Minnesota 55905 United States (1)
Department of Microbiology, Immunology, and Molecular Genetics (MIMG), Quantitative & Computational Biosciences (QCBio), University of California, Los Angeles, LA, USA (1)
Director of Women’s Health Research Women’s Service Line Inova Health System (1)
Director, Institute of Advanced Study in Science and Technology (IASST), Vigyan Path, Paschim Boragaon, Guwahati 781035, Assam, India (1)
Endocrine Research Unit, Mayo Clinic, Rochester MN (1)
Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, CA, USA School of Medicine and Department of Urology, UCSF, CA, USA Department of Cellular and Molecular Pharmacology, UCSF, CA, USA (1)
Infection Biology (1)
Institue of Bioinformatics Discoverer Building, 7th Floor International Tech Park Whitefield, Bangalore - 560 066 Karnataka, India. (1)
Institute of Bioinformatics, 7th floor, Unit-1, Discoverer building, ITPL, Bangalore - 560066, India (1)
Institute of Bioinformatics, Unit 1, 7th floor, Discoverer building, ITPL, Whitefield, Bangalore - 560066, Karnataka, India (1)
Johns Hopkins University (1)
Mass Spectrometry Laboratory, Mucin Biology Groups,Department of Medical Biochemistry and Cell Biology, University of Gothenburg, Gothenburg, Sweden (1)
Maynooth University Department of Biology Maynooth University, Maynooth, Co. Kildare, Ireland. (1)
Mayo Clinic (1)
McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA (1)
McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University, Baltimore, Maryland 21205 USA (1)
Molecular Cell and Developmental Biology, School of Life Sciences, University of Dundee (1)
Molecular Genetics Laboratory, Infection and Immunology Division, Translational Health Science and Technology Institute, India (1)
National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (1)
Platform Proteome Analysis Institute for Clinical Biochemistry and Pathobiochemistry German Diabetes Center (1)
Platform proteome Analysis Institute for Clinical Biochemistry and Pathobiochemistry German Diabetes Center (1)

Tags

xref:PubMed:29097367 (1)

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Oligoarray comparative genomic hybridisation-mediated mapping of suppressors of an essential receptor tyrosine kinase generated in a deletion-biased mutagenesis screen

We have used oligoarray comparative genomic hybridization (aCGH) to identify novel suppressors generated in a UV-TMP based suppressor screen. This approach is suitable for detecting single gene mutations as well as copy number variations. Keywords: C.elegans Suppressor screen array CGH [1] 2 test s...

ORGANISM(S): Caenorhabditis elegans

2012-07-12 | E-GEOD-15224 | biostudies-arrayexpress

Screening of Family Members of Nonalcoholic Fatty Liver Disease Patients can Detect Undiagnosed Nonalcoholic Fatty Liver Disease Among Them: Is There a Genetic Link?

Not available

S-EPMC8267349 | biostudies-literature

MDR K. penumoniae, A. baumannii, E. coli, and P. aeruginiosa SWATH

This study elucidates the whole proteome changes in the MDR isolates of K. penumoniae, A. baumannii, E. coli, and P. aeruginiosa in the presence of Ampicillin, Kanamycin, and Nalidixic acid. Label-free SWATH-MS is used for protein quantitation of antibiotics treated and untreated samples.

ORGANISM(S): Klebsiella pneumoniae Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 Klebsiella pneumoniae ATCC BAA-2146 Bacteria

2023-07-26 | PXD039154 | Pride

Comprehensive proteomics investigation of P. vivax-infected human plasma and parasite isolates.

Not available

S-EPMC7053139 | biostudies-literature

Increased resistance of SARS-CoV-2 variant P.1 to antibody neutralization.

Not available

S-EPMC8053237 | biostudies-literature

Nair2015 - Interaction between neuromodulators via GPCRs - Effect on cAMP/PKA signaling (D1 Neuron)

Nair2015 - Interaction between neuromodulators via GPCRs - Effect on cAMP/PKA signaling (D1 Neuron) This model is described in the article: Sensing Positive versus Negative Reward Signals through Adenylyl Cyclase-Coupled GPCRs in Direct and Indirect Pathway Striatal Medium Spiny ...

2024-09-02 | BIOMD0000000635 | BioModels

Nair2015 - Interaction between neuromodulators via GPCRs - Effect on cAMP/PKA signaling (D2 Neuron)

Nair2015 - Interaction between neuromodulators via GPCRs - Effect on cAMP/PKA signaling (D2 Neuron) This model is described in the article: Sensing Positive versus Negative Reward Signals through Adenylyl Cyclase-Coupled GPCRs in Direct and Indirect Pathway Striatal Medium Spiny ...

2024-09-02 | BIOMD0000000636 | BioModels

Increased Resistance of SARS-CoV-2 Variant P.1 to Antibody Neutralization.

Not available

S-EPMC7941628 | biostudies-literature

A new model to predict response to direct-acting antiviral therapy in decompensated cirrhotics due to hepatitis C virus.

Not available

S-EPMC7592091 | biostudies-literature

Functional and association analysis of an Amerindian-derived population-specific p.(Thr280Met) variant in RBPJL, a component of the PTF1 complex.

Not available

S-EPMC5839029 | biostudies-literature

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