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ProteomicsNarrow precursor window for DIA-MS enhances protein identification and quantification
Data independent acquistion (DIA) is becoming widely as a method of choice in quantitation proteomics due to its high reproducibility and quantitation accuracy at high-throughput fashion. In this project, we systematically evaluated the effect of the selected precursor mass range for DIA-MS on the p...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2021-10-01 | PXD026965 | Pride
Arabidopsis Data independent acqusition (dia) Lc-ms/ms 
ProteomicsNarrow-window DIA: Ultra-fast quantitative analysis of comprehensive proteomes with high sequencing depth. Evaluation of window width and injection time.
Mass spectrometry (MS)-based proteomics aims to characterize comprehensive proteomes in a fast and reproducible manner. Here, we present an ultra-fast scanning data-independent acquisition (DIA) strategy consisting on 2-Th precursor isolation windows, dissolving the differences between data-dependen...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
MSV000095977 | MassIVE
ProteomicsNarrow-window DIA: Ultra-fast quantitative analysis of comprehensive proteomes with high sequencing depth. Evaluation of window width and injection time.
Mass spectrometry (MS)-based proteomics aims to characterize comprehensive proteomes in a fast and reproducible manner. Here, we present an ultra-fast scanning data-independent acquisition (DIA) strategy consisting on 2-Th precursor isolation windows, dissolving the differences between data-dependen...
ORGANISM(S): Homo sapiens (Human) 
2024-02-01 | PXD046285 | Pride
Dia Astral Proteomics 
ProteomicsProteome study to optimize Zeno SWATH DIA
Data-independent acquisition (DIA) techniques, such as SWATH acquisition, have emerged as the preferred strategy for proteomic analysis. Our study optimizes the SWATH-DIA method using a narrow isolation window placement approach improving its proteomic performance. We optimized the acquisition param...
ORGANISM(S): Homo Sapiens (human) Cellular Organisms Mus Musculus (mouse) 
2024-07-20 | PXD050030 | JPOST Repository
ProteomicsNarrow-window DIA: Ultra-fast quantitative analysis of comprehensive proteomes with high sequencing depth. Dilution Series and Single Shot Gradient comparison.
Mass spectrometry (MS)-based proteomics aims to characterize comprehensive proteomes in a fast and reproducible manner. Here, we present an ultra-fast scanning data-independent acquisition (DIA) strategy consisting on 2-Th precursor isolation windows, dissolving the differences between data-dependen...
ORGANISM(S): Homo sapiens (Human) 
2024-02-01 | PXD046283 | Pride
Dia Astral Proteomics 
ProteomicsCov-MS: a community-based template assay for clinical MS-based protein detection in Sars-Cov-2 patients
Rising population density and global mobility are among the reasons why pathogens such as SARS-CoV-2, the virus that causes COVID-19, spread so rapidly across the globe. The policy response to such pandemics will always have to include accurate monitoring of the spread, as this provides one of the f...
ORGANISM(S): SARS Coronavirus CDC#200301157 Homo sapiens (Human) 
2021-07-16 | PXD022550 | Pride
Sars-cov2 Covid-19 Dda Narrow-window dia 
ProteomicsDIA to inform Triple Quad Assay development
Mass spectrometry based targeted proteomics methods provide sensitive and high-throughput analysis of selected proteins. To develop a targeted bottom-up proteomics assay, peptides must be evaluated as proxies for the measurement of a protein or proteoform in a biological matrix. Candidate peptide se...
ORGANISM(S): Homo Sapiens 
2025-06-11 | PXD059611 | panorama
ProteomicsUltra-fast label-free quantification andcomprehensive proteome coveragewith narrow-window data-independentacquisition. DDA vs DIA comparison
Mass spectrometry (MS)-based proteomics aims to characterize comprehensive proteomes in a fast and reproducible manner. Here, we present an ultra-fast scanning data-independent acquisition (DIA) strategy consisting on 2-Th precursor isolation windows, dissolving the differences between data-dependen...
ORGANISM(S): Homo sapiens (Human) 
2024-02-01 | PXD046453 | Pride
Dia Astral Proteomics 
ProteomicsNarrow-window DIA: Ultra-fast quantitative analysis of comprehensive proteomes with high sequencing depth. Dilution Series and Single Shot Gradient comparison.
Mass spectrometry (MS)-based proteomics aims to characterize comprehensive proteomes in a fast and reproducible manner. Here, we present an ultra-fast scanning data-independent acquisition (DIA) strategy consisting on 2-Th precursor isolation windows, dissolving the differences between data-dependen...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2025-01-20 | MSV000096899 | MassIVE
UnknownIsoPS-DIA: Dual Functionality of Absolute Targeted Quantification and Global Proteome Profiling.
Not available
S-EPMC12937053 | biostudies-literature
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