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TranscriptomicsTranscription profiling of strains of Paxillus involutus that show different abilities in formation of ectomycorrhizal associations with birch (Betula pendula)
A microarray analysis was conducted to investigate transcriptional differences between strains of Paxillus involutus that show different abilities in formation of ectomycorrhizal associations with birch (Betula pendula). Our goal was to identify genes that showed differential regulation from compari...
ORGANISM(S): Ectomycorrhizal tissue: Paxillus involutus/Betula pendula 
2004-10-05 | E-MEXP-179 | biostudies-arrayexpress
GenomicsHDAC-regulated myomiRs control BAF60 variant exchange and direct the functional phenotype of fibroadipogenic progenitors in dystrophic muscles
Fibro-adipogenic progenitors (FAPs) are emerging cellular components of the skeletal muscle regenerative environment. The alternative functional phenotype of FAPs - either supportive of muscle regeneration or promoting fibro-adipogenic degeneration M-bM-^@M-^S is a key determinant in the pathogenesi...
ORGANISM(S): Mus musculus 
2014-04-02 | E-GEOD-52062 | biostudies-arrayexpress
TranscriptomicsmiR-206 integrates multiple components of differentiation pathways to control the transition from growth to differentiation in rhabdomyosarcoma cells (miRNA)
Background: Similar to replicating myoblasts, many rhabdomyosarcoma cells express the myogenic determination gene MyoD. In contrast to myoblasts, rhabdomyosarcoma cells do not make the transition from a regulative growth phase to terminal differentiation. Previously we demonstrated that the forced e...
ORGANISM(S): Homo sapiens 
2012-04-01 | E-GEOD-35606 | biostudies-arrayexpress
UnknownPerformance of the Affymetrix GeneChip HIV PRT 440 platform for antiretroviral drug resistance genotyping of human immunodeficiency virus type 1 clades and viral isolates with length polymorphisms.
Not available
S-EPMC85275 | biostudies-literature
TranscriptomicsTranscription profiling of Paxillus involutus, Betula pendula mycorrhizal tissue at five different time points after initial contact between the symbionts
Mycorrhizal tissue was analyzed at five different time points after initial contact between the symbionts had occurred. The experimental design also included reference material grown axenically in parallel during the time course, with the purpose of detecting differential regulation of genes not rel...
ORGANISM(S): Betula pendula 
2005-08-30 | E-MEXP-180 | biostudies-arrayexpress
TranscriptomicsMouse Soleus Muscle Chronic Electrical Stimulation Study
Stimulation of the mouse hindlimb via the sciatic nerve was used to induce contractions for 4 hours to investigate acute muscle gene activation in a model of muscle phenotype conversion. Initial force production (1.6 + 0.1 g/g body weight) declined 45% within 10 min and was maintained for the remain...
ORGANISM(S): Mus musculus 
2010-06-01 | E-GEOD-14391 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Francisella tularensis to spermine
Francisella tularensis LVS was grown in MH broth in the presence or absence of 200uM spermine. RNA was harvasted from overnight (16 hour) cultures and processed for microarray hybridization.
ORGANISM(S): Francisella tularensis 
2009-11-20 | E-MEXP-2327 | biostudies-arrayexpress
GenomicsCell-Type-Specific TGF-beta Signaling is Targeted to Genes that Control Cell Identity: ChIP-Seq
Smad3 co-occupies DNA binding sites with master transcription factors. Pu.1, MyoD, Oct4, IgG, Smad3, and Smad2/3 ChIP-Seq.
ORGANISM(S): Homo sapiens 
2011-08-24 | E-GEOD-21614 | biostudies-arrayexpress
UnknownNF-κB-mediated Pax7 dysregulation in the muscle microenvironment promotes cancer cachexia.
Not available
S-EPMC3809785 | biostudies-literature
TranscriptomicsDistant cis Regulation of Myogenic Differentiation
Identifying tissue and condition-specific gene regulatory elements and the mechanisms by which they associate with their target genes in human cells remains a significant challenge, largely due to the vast amount of non-protein-coding sequence in the human genome. Despite increasing evidence of phys...
ORGANISM(S): Homo sapiens 
2012-02-01 | E-GEOD-29865 | biostudies-arrayexpress
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