Navarro E E - OmicsDI

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Unknown (3404)
Proteomics (86)
Transcriptomics (78)
Genomics (36)
Metabolomics (4)
Models (1)

Organisms

Homo sapiens (114)
Mus musculus (35)
Saccharomyces cerevisiae (18)
Escherichia coli (9)
Arabidopsis thaliana (5)
Sus scrofa domesticus (4)
Citrus limonia (3)
Rattus norvegicus (3)
Solanum tuberosum subsp. andigenum (2)
Pan troglodytes (2)
Quercus ilex (2)
Citrus medica (1)
Dreissena polymorpha (1)
Macaca mulatta (1)
Oncorhynchus mykiss (1)
502780 (1)
Archaea (1)
Bacteria (1)
Bison (1)
Caenorhabditis elegans (1)
Candida albicans (1)
Cicer arietinum (1)
Coriolopsis gallica (1)
Equus sp. (1)
Eukaryota (1)
Fomitopsis pinicola (1)
Morus alba (1)
Octopus vulgaris (1)
Pycnoporus (1)
Saccharum officinarum (1)

Repository

biostudies-arrayexpress (84)
pride (82)
EGA (32)
MetaboLights (4)
MassIVE (3)
BioModels (1)

Tissue

Cell culture (10)
Brain (8)
Blood (7)
Epithelial cell (5)
B cell (4)
Cell suspension culture (4)
Heart (4)
Peripheral blood mononuclear cell (3)
Plant cell (3)
B-cell chronic lymphocytic leukemia cell (2)
Blood plasma (2)
Bone (2)
Colon (2)
Embryonic stem cell (2)
Liver (2)
Lung (2)
Stem cell (2)
T cell (2)
Blood cell (1)
Blood serum (1)
Bone marrow cell (1)
Dendritic cell (1)
Dentin (1)
Early embryonic cell (1)
Embryo (1)
Endothelial cell of umbilical vein (1)
Epididymal white adipose tissue (1)
IMR-90 cell (1)
Schwann cell (1)
T-lymphocyte (1)

Disease

Chronic lymphocytic leukemia (3)
Neuroblastoma (2)
Alzheimer's disease (2)
Cardiovascular system disease (2)
Colon cancer (2)
Disease free (2)
Immuno-osseus dysplasiaspondyloenchondrodysplasia (SPENCD) (1)
Erythroleukemia (1)
Raji Burkitt's lymphoma (1)
Acute leukemia (1)
COVID-19 (1)
Cataract (1)
Chronic myelogenous leukemia (1)
Cutaneous malignant melanoma 1 (1)
Glioblastoma (1)
Huntington Disease (1)
Leigh disease (1)
Melanoma (1)
Mucolipidosis II alpha/beta (1)
Mucopolysaccharidosis IVA (1)
Myocardial ischemia (1)
Myopathy (1)
Non-small cell lung carcinoma (1)
Paracoccidioidomycosis (1)
Pneumonia (1)
Severe acute respiratory syndrome (1)
Skin cancer (1)
Zika fever (1)
Zika virus congenital syndrome (1)

Technology Type

Mass Spectrometry (82)
Shotgun proteomics (52)
Bottom-up proteomics (14)
SWATH MS (10)
Affinity purification coupled with mass spectrometry proteomics (8)
Data-dependent acquisition (7)
Data-independent acquisition (5)
Gel-based experiment (5)
All-ion fragmentation (3)
DiaPASEF (3)
Mass spectrometry (2)
NMR spectroscopy (2)
AB 5500xl Genetic Analyzer (1)
Illumina Genome Analyzer II, Affymetrix snp 6.0, Illumina Genome Analyzer IIx, GPL570, Affymetrix GeneChip Human Genome U133 plus 2.0 (1)
Illumina HiSeq 2000 (1)
HDMSE (1)
SRM/MRM (1)

Instrument Platform

NextSeq 500 (2)
TripleTOF 5600 (2)
Whole Transcriptome v2 kit (1)
Not applicable (1)
G2565AA DNA microarray scanner [Agilent] (1)
Illumina NovaSeq X (1)
NextSeq 2000 (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 4000 (1)
LTQ Orbitrap (1)
LTQ Orbitrap Elite (1)
LTQ Orbitrap Velos (1)
Q Exactive (1)
Bruker (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - positive - reverse phase (1)
Nuclear Magnetic Resonance (NMR) - (1)

Publication Date

2012 (18)
2013 (15)
2022 (15)
2025 (13)
2026 (11)
2023 (10)
2024 (9)
2020 (9)
2018 (8)
2014 (8)
2015 (7)
2011 (7)
2010 (7)
2009 (6)
2019 (6)
2021 (6)
2016 (5)
2008 (5)
2007 (5)
2017 (4)

CHEBI ID

CHEBI:15366 (2)
CHEBI:15428 (2)
CHEBI:30769 (2)
CHEBI:15354 (1)
CHEBI:15422 (1)
CHEBI:15603 (1)
CHEBI:15741 (1)
CHEBI:15903 (1)
CHEBI:15971 (1)
CHEBI:16015 (1)
CHEBI:16024 (1)
CHEBI:16236 (1)
CHEBI:16414 (1)
CHEBI:16449 (1)
CHEBI:16551 (1)
CHEBI:16643 (1)
CHEBI:16737 (1)
CHEBI:16856 (1)
CHEBI:16870 (1)
CHEBI:16905 (1)
CHEBI:16919 (1)
CHEBI:16977 (1)
CHEBI:17066 (1)
CHEBI:17191 (1)
CHEBI:17203 (1)
CHEBI:17268 (1)
CHEBI:17295 (1)
CHEBI:17345 (1)
CHEBI:17361 (1)
CHEBI:17505 (1)

Metabolite Name

Citric acid (2)
Glycine (2)
(R)-3-hydroxybutyrate (1)
(S)-lactic acid (1)
2-hydroxypropanoic acid (1)
ATP (1)
CE 18:0 (1)
CMP (1)
CTP (1)
Cer 34:0;2O (1)
Cer 34:1;2O|Cer 18:1;2O/16:0 (1)
Cer 36:1;2O (1)
Cer 38:0;3O (1)
Cer 40:0;2O|Cer 18:0;2O/22:0 (1)
Cer 40:1;2O|Cer 18:1;2O/22:0 (1)
Cer 40:2;2O|Cer 18:1;2O/22:1 (1)
Cer 42:0;2O|Cer 18:0;2O/24:0 (1)
Cer 42:0;3O|Cer 18:0;2O/24:0;O (1)
Cer 42:1;2O|Cer 18:1;2O/24:0 (1)
Cer 43:1;2O|Cer 18:1;2O/25:0 (1)
D-glucose (1)
D-mannose (1)
DG 32:0|DG 16:0_16:0 (1)
DG 34:0|DG 16:0_18:0 (1)
DG 36:1|DG 18:0_18:1 (1)
Hydroxyvitamin D3 (1)
L-alanine (1)
L-glutamic acid (1)
L-glutamine (1)
L-histidine (1)

IsPrivate

False (1)

Model Flag

Non Kinetic (1)

Modelling Approach

Constraint-based model (1)

Modification

2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)

Study type

Transcription profiling by array (51)
Comparative genomic hybridization by array (8)
RNA-seq of coding RNA (6)
ChIP-seq (4)
Methylation profiling by array (3)
Other (2)
ChIP-chip by SNP array (1)
Unknown experiment type (1)
Proteomic profiling by mass spectrometer (1)
RNAi profiling by array (1)
ChIP-chip by array (1)
Genotyping by array (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of total RNA (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (450)
2021 (414)
2025 (399)
2023 (376)
2024 (340)
2020 (290)
2018 (176)
2019 (173)
2017 (145)
2016 (112)
2015 (105)
2014 (100)
2013 (86)
2012 (73)
2026 (63)
2011 (51)
2010 (42)
2009 (32)
2008 (17)
2007 (10)
2006 (8)
2004 (6)
2001 (4)
2005 (3)
2003 (3)
2002 (3)
2000 (3)
1999 (3)
1998 (1)

Lab affiliation

CEA-Marcoule, ProGenoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Ceze, France (2)
ETH Zurich Institute of Molecular Systems Biology (2)
Instituto de Bioingeniería, Universidad Miguel Hernández, 03202 Elche, SPAIN (2)
Laboratory of Biomedical Technologies, Agenzia Nazionale per le Nuove Tecnologie, l'Energia e lo Sviluppo Economico Sostenibile (ENEA), Rome, Italy (2)
ProGenTomics, Laboratory of Pharmaceutical Biotechnology,Ghent University (2)
1) 1Mitochondrial Neuropathology laboratory, Institut de Neurociències, Universitat Autònoma de Barcelona, Bellaterra, Spain 2) Department of Cellular Biology, Physiology and Immunology, Universitat Autònoma de Barcelona, Bellaterra, Spain. (1)
1. Institut de Pharmacologie et de Biologie Structurale (IPBS), CNRS, Université de Toulouse (UT), Toulouse, 31077, France 2. Infrastructure Nationale de Protéomique, ProFI, UAR 2048, Toulouse, France (1)
1Institute of Lung Health and Immunity, Comprehensive Pneumology Center Munich with the CPC-M bioArchive, Helmholtz Center Munich, Research Center for Environmental Health, Member of the German Center of Lung Research (DZL), Germany (1)
Agricultural and Plant Biochemistry and Proteomics Research Group, Dept. of Biochemistry and Molecular Biology, University of Cordoba, Agrifood Campus of International Excellence (ceiA3), 14071 Cordoba, Spain (1)
Biomedical Research in Melanoma-Animal Models and Cancer Laboratory Vall d'Hebron Research Institute (VHIR), Vall d'Hebron Hospital Barcelona-UAB Barcelona, 08035, Spain. (1)
Biotech Research and Innovation Centre (BRIC), University of Copenhagen, Copenhagen, Denmark (1)
CEA-Marcoule, ProGÃ©noMIX platform, DRF-Li2D, 30207 Bagnols-sur-CÃ¨ze, France (1)
CEA-Marcoule, ProGénoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Cèze, France (1)
CNIC, Spain (1)
CRG/UPF (1)
Cardiovascular Proteomics Laboratory. Centro Nacional de Investigaciones Cardiovasculares (CNIC), Madrid, Spain (1)
Cardiovascular Proteomics Laboratory. Centro Nacional de Investigaciones Cardiovasculares (CNIC), Madrid, Spain. (1)
Centro Nacional de Investigaciones Cardiovasculares (CNIC) and CIBER de Enfermedades Cardiovasculares (CIBERCV), Madrid, Spain (1)
Centro Nacional de Investigaciones Cardiovasculares (CNIC), Madrid (Spain) (1)
Centro Nacional de Investigaciones Cardiovasculares (CNIC), Madrid. (1)
Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC) (1)
Centro Nacional de Investigaciones Cardiovasculares, 28029, Madrid, Spain (1)
Charité - Universitätsmedizin Berlin Research group Biochemistry and Systems Biology of the Metabolism Institute of Biochemistry Germany (1)
Chronic Disease Programme (UFIEC), Instituto de Salud Carlos III, Majadahonda, E-28220 Madrid, Spain (1)
Cologne Excellence Cluster on Cellular Stress Responses in Ageing-Associated Diseases (CECAD), Center for Molecular Medicine Cologne (CMMC), and Institute for Mitochondrial Diseases and Ageing, Medical Faculty, University of Cologne D-50931 Cologne, Germany. (1)
Cornell University (1)
Department of Biochemistry and Molecular Biology and Agricultural Chemistry and Soil science University of Alicante SPAIN (1)
Department of Biochemistry, Charité – Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, Berlin Institute of Health, Berlin, Germany (1)
Department of Biomedicine, University of Bergen, Norway (1)
Department of Oncology and Pathology, Karolinska Institute and Science for Life Laboratory (1)