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TranscriptomicsIron (Fe) deficiency in Citrus
Transcription profiling of citrus rootstock Poncirus trifoliata (L.) Raf. Keywords: Abiotic stress (Iron chlorosis) Total RNA from four replicates for each sample category (Poncirus trifoliata (L.) Raf watered for 60 days with 18 uM Fe-EDDHA or without Fe-EDDHA) were generated and compared.
ORGANISM(S): Poncirus trifoliata 
2010-05-19 | E-GEOD-17255 | biostudies-arrayexpress
TranscriptomicsTranscriptome inheritance of a citrus somatic hybrid
The main objective of the present study was to analyze whether the novel phenotype of this complex three-way tetraploid interspecific hybrid, displaying mixed dominant, codominant and transgressive traits is associated with non additive expression of the two diploid parental genomes. Keywords: Comp...
ORGANISM(S): Citrus limon 
2010-06-21 | E-GEOD-18386 | biostudies-arrayexpress
ProteomicsChemical and Random Additive Noise Elimination (CRANE) - case_study - multicenter_dataset
The effectiveness of the novel electrospray ionisation - liquid chromatography mass spectrometry (ESI-LC-MS) data de-noising technique, CRANE, is demonstrated by denoising the MS1 and all the MS2 windows of the multicentre, data-independent acquisi-tion (DIA) MS dataset from Navarro, et al. (2016).
ORGANISM(S): Homo sapiens (Human) Escherichia coli Saccharomyces cerevisiae (Baker's yeast) 
2021-07-26 | PXD020529 | Pride
Lc-msms Random noise Chemical noise Denoise Baseline noise Dia 
TranscriptomicsIdentification of transcription factors potentially involved in the juvenile to adult phase transition in Pineapple sweet orange (C. sinensis (L.)
The main objective of the present study was to identify citrus transcrition factors putatively involved in the juvenile to adult transition in citrus. A oligonucleotide microarray containing 1152 putative unigenes of citrus transcription factors was used. Pineapple sweet orange (C. sinensis (L.) wa...
ORGANISM(S): Citrus sinensis 
2013-07-27 | E-GEOD-39799 | biostudies-arrayexpress
ProteomicsIdentification of spidroin proteins in the silk glands of Nephila clavipes spiders
Glands were frozen at -80 ºC immediately after being retrieved and stored under this condition until initiating the proteomics analysis protocol. Glands were washed with cold PBS and immersed in 120 l of homogenization buffer (50 mM Tris-HCl, pH 6.8, 10 mM DTT, 4% (w/v) SDS). Glands were boiled for ...
ORGANISM(S): Trichonephila clavipes 
2022-12-07 | PXD023141 | Pride
Spider silk  proteomics  liquid chromatography-tandem mass spectrometry  silk gut 
UnknownYellow lupin (Lupinus luteus L.) transcriptome sequencing: molecular marker development and comparative studies.
Not available
S-EPMC3472298 | biostudies-literature
UnknownPotential for Drought Stress Alleviation in Lettuce (Lactuca sativa L.) with Humic Substance-Based Biostimulant Applications
Not available
S-EPMC12349542 | biostudies-literature
UnknownDynamic cell cycle-dependent phosphorylation modulates CENP-L-CENP-N centromere recruitment.
Not available
S-EPMC9582625 | biostudies-literature
UnknownDuck TRIM27-L enhances MAVS signaling and is absent in chickens and turkeys.
Not available
S-EPMC4577026 | biostudies-literature
TranscriptomicsLost miRNA surveillance of NOTCH, IGFR pathway-road to sarcomagenesis [Illumina]
The goal of this study was comparative analysis of differentially expressed miRNA and their targets in human chondrosarcoma JJ012 and chondrocytes C28 cell line(control) to elucidate the major signal transduction pathways deregulation in sarcomagenesis. Total RNA extraction was followed by the analy...
ORGANISM(S): Homo sapiens 
2013-08-28 | E-GEOD-48418 | biostudies-arrayexpress
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