Nielsen E E EE - OmicsDI

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Unknown (69)
Metabolomics (10)
Transcriptomics (2)
Proteomics (2)
Models (1)

Organisms

Platichthys flesus (1)
Mus musculus (1)
Saccharomyces cerevisiae (1)
uncultivated soil bacterium (1)
Plasmodium falciparum UGK 730.2 (1)
Orthoreovirus (1)
Mesoplasma florum L1 (1)
Octopus variabilis (1)
Bordetella bronchiseptica (1)
Vicia faba var. faba (1)
Giardia duodenalis assemblage B (1)
Anaerotignum neopropionicum DSM 3847 (1)
Acetobacterium wieringae (1)
Lactococcus cremoris subsp. cremoris NZ9000 (1)
Limnobacter thiooxidans (1)
Nevskia ramosa (1)
NEWT:1105325 (1)
Methylomonas sp. (1)
Phialophora verrucosa (1)
Candida albicans 24C (1)
Anastrepha ludens (1)
Oryza barthii (1)
Plasmodium falciparum D10 (1)
Bacteroides sp. 1_1_11 (1)
Saccharomyces cf. cerevisiae (1)
Rhodomicrobium vannielii ATCC 17100 (1)
Weeksella virosa (1)
Azumapecten farreri (1)
Stenocereus stellatus (1)
Formosa sp. Hel1_33_131 (1)

Repository

MetaboLights (9)
biostudies-arrayexpress (2)
BioModels (1)
GNPS (1)
PanoramaPublic (1)
pride (1)

Tissue

Brain (1)

Disease

Alzheimer's disease (1)

Technology Type

Mass spectrometry (8)
Mass spectrometry assay (1)
Mass Spectrometry (1)
Shotgun proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (6)
LTQ FT (1)
MaXis (1)
Liquid Chromatography MS - positive (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)

Publication Date

2023 (8)
2016 (1)
2011 (1)
2006 (1)
2015 (1)
2024 (1)
2021 (1)
2020 (1)

CHEBI ID

CHEBI:35038 (3)
CHEBI:16359 (3)
CHEBI:28865 (3)
CHEBI:75342 (3)
CHEBI:195271 (2)
CHEBI:143757 (2)
CHEBI:182784 (2)
CHEBI:143745 (2)
CHEBI:139138 (2)
CHEBI:34494 (2)
CHEBI:69081 (2)
CHEBI:6359 (2)
CHEBI:73858 (2)
CHEBI:173703 (2)
CHEBI:34687 (2)
CHEBI:64563 (2)
CHEBI:27432 (2)
CHEBI:48928 (2)
CHEBI:16811 (2)
CHEBI:80774 (2)
CHEBI:27997 (2)
CHEBI:16113 (2)
CHEBI:18257 (2)
CHEBI:15741 (2)
CHEBI:15978 (2)
CHEBI:30769 (2)
CHEBI:181874 (1)
CHEBI:195266 (1)
CHEBI:195267 (1)
CHEBI:195269 (1)

Metabolite Name

Tris(2-butoxyethyl) phosphate (3)
Cholic acid (3)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
Dibutyl phthalate (DBP) (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
Lyso-PC(16:0) (2)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
Monoolein (2)
Cholesterol (2)
Succinate (2)
Lactulose (2)
Methionine (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
9(10)-EpOME (2)
Taurocholic acid (2)
Elaidic acid (2)
NCGC00168953-02_C47H76O17_(3beta,5xi,9xi,22beta)-22,24-Dihydroxyolean-12-en-3-yl 6-deoxy-alpha-L-mannopyranosyl-(1->2)-alpha-L-arabinopyranosyl-(1->2)-beta-D-glucopyranosiduronic acid (1)
Sodium taurochenodeoxycholate (1)
(R)-4-((3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-3,7,12-trihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
(R)-4-((3R,4R,5S,8S,9S,10R,13R,14S,17R)-3,4-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
3beta-Hydroxy-5-cholenoic acid (1)
Lyso PC (22:6) (1)
Methyl (3R,4R,5R)-5-[(2R,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(E)-3-phenylprop-2-enoyl]oxyoxan-2-yl]oxy-3,4-dihydroxycyclohexene-1-carboxylate (1)
Propanoic acid, 3,3'-thiobis-, didodecyl ester (1)
2-((R)-4-((3R,5S,7S,8R,9S,10S,13R,14S,17R)-3,7-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanamido)ethane-1-sulfonic acid (1)
LU052302 Acetyl tributyl citrate|tributyl 2-acetyloxypropane-1,2,3-tricarboxylate (1)
Hexanedioic acid, bis(2-ethylhexyl) ester (1)
9-Octadecenamide, (Z)- (1)

IsPrivate

False (1)

Modelling Approach

Ordinary differential equation model (1)

Study type

Transcription profiling by array (2)

Release Date

2022 (12)
2020 (9)
2023 (6)
2021 (6)
2018 (6)
2025 (5)
2024 (5)
2011 (4)
2008 (4)
2019 (3)
2026 (2)
2016 (2)
2015 (2)
2014 (2)
2006 (1)
2012 (1)
2010 (1)

Lab affiliation

Neuroproteomics, Max Delbrueck Center for Molecular Medicine in the Helmholtz Association, Robert-Roessle-Strasse 10, 13125 Berlin, Germany (1)

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Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance

The development of reliable, mixed-culture biotechnological processes hinges on understanding how microbial ecosystems respond to disturbances. Here we reveal extensive phenotypic plasticity and niche complementarity in oleaginous microbial populations from a biological wastewater treatment plant. W...

2021-04-06 | MTBLS2021 | MetaboLights

Plasmid-encoded toxin defence mediates mutualistic microbial interactions

Gut environments harbour dense microbial ecosystems in which plasmids are widely distributed. Plasmids facilitate the exchange of genetic material among microorganisms while enabling the transfer of a diverse array of accessory functions. However, their precise impact on microbial community compo...

2023-08-10 | MTBLS7248 | MetaboLights

Sex-Linked Differentiation in Commercially Exploited Fishes: Rethinking Population Structure in Dynamic Marine Environments.

Not available

S-EPMC12551363 | biostudies-literature

Regulatory T cells promote endurance exercise adaptation by shielding muscle mitochondria from damage

Exercise enhances physical performance and reduces the risk of many disorders such as cardiovascular disease, type 2 diabetes, dementia and cancer. Exercise characteristically incites an inflammatory response, notably in skeletal muscles. While some effector mechanisms have been identified, regul...

2023-10-10 | MTBLS8391 | MetaboLights

Transcription profiling of Platichthys flesus (flounder) from the North Sea and the Baltic sea and their reactions on being exposed to water of different salinities

The experiment compared flounder from the North Sea and the Baltic sea and their reactions on being exposed to water of different salinities

ORGANISM(S): Platichthys flesus

2006-12-20 | E-MAXD-22 | biostudies-arrayexpress

Basal and insulin mediated VLDL-triglyceride kinetics in type 2 diabetic men.

Not available

S-EPMC3012201 | biostudies-literature

Host-gut microbiota interactions shape parasite infections in farmed Atlantic salmon

Animals and their associated microbiota share long evolutionary histories. However, it is not always clear how host genotype and microbiota interact to affect phenotype. We applied a hologenomic approach to explore how host-microbiota interactions shape lifetime growth and parasite infection in f...

2024-01-24 | MTBLS8575 | MetaboLights

Do cognitive bias and heuristics influence improvement in knee pain in patients with knee osteoarthritis treated with open label placebo? The CHIPS study - An exploratory study using questionnaire and group concept mapping.

Not available

S-EPMC11836500 | biostudies-literature

Impact of weighted blankets on sleep disturbance among children with attention deficit hyperactivity disorders (ADHD): study protocol for a pragmatic randomised controlled trial.

Not available

S-EPMC11980158 | biostudies-literature

Interventions for treatment of COVID-19: A living systematic review with meta-analyses and trial sequential analyses (The LIVING Project).

Not available

S-EPMC7498193 | biostudies-literature