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TranscriptomicsMicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing
MicroRNAs (miRNA) are short single-stranded RNA molecules that regulate gene expression post-transcriptionally by binding to complementary sequences in the 3' untranslated region (3' UTR) of target mRNAs. MiRNAs participate in the regulation of myogenesis, and identification of the complete set of m...
ORGANISM(S): Sus scrofa 
2009-11-24 | E-GEOD-14584 | biostudies-arrayexpress
TranscriptomicsLi-treatment-induced NDI (Li-NDI) in rats
5 rats were offered food containing 40mM Li/Kg dry weight for 4 weeks, and 5 control rats obtained standard food. The RNA from the inner medulla of the Li-treated rats was labeled red (channel 1), and from the control rats labeled green (channel 2). The samples from Li-treated rats 1+2 and control ...
ORGANISM(S): Rattus norvegicus 
2004-09-01 | E-GEOD-1341 | biostudies-arrayexpress
TranscriptomicsZbtb20-mediated repression of genes in developing CA1 pyramidal neurons
The transcriptional repressor Zbtb20 is essential for specification of hippocampal CA1 pyramidal neurons. Moreover, ectopic expression of Zbtb20 is sufficient to transform subicular and retrosplenial areas of D6/Zbtb20S mice to CA1. We used microarrays to identify genes that are repressed by Zbtb20 ...
ORGANISM(S): Mus musculus 
2014-04-11 | E-GEOD-38837 | biostudies-arrayexpress
GenomicsDNA-seq of differentially induced promoter regions in E. coli UTI89 strain grown in either J82 bladder epithelial cells, urine, DMEM or LB medium.
The method DFI-seq was developed to enable identification of differentially expressed genes in uropathogenic E. coli strain UTI89 during growth in human urine and in bladder epithelial cells. By utilising this new method, the aim was to identify novel virulence genes in UTI89. DFI-seq is a combinati...
ORGANISM(S): Escherichia coli UTI89 
2017-05-01 | E-MTAB-5657 | biostudies-arrayexpress
TranscriptomicsTranscriptomic analysis of porcine muscle Biceps femoris (BF) exposed to a single bout of endurance exercise
Acute physical exercise elicits changes in gene expression in skeletal muscles to promote metabolic changes and to repair exercise-induced muscle injuries. Here, we investigated the impact of a single bout of running exercise until exhaustion on global transcriptional profiles in porcine skeletal mu...
ORGANISM(S): Sus scrofa 
2012-07-12 | E-GEOD-30013 | biostudies-arrayexpress
TranscriptomicsTranscriptomic analysis of porcine muscle Longissimus dorsi (LD) exposed to a single bout of endurance exercise
Acute physical exercise elicits changes in gene expression in skeletal muscles to promote metabolic changes and to repair exercise-induced muscle injuries. Here, we investigated the impact of a single bout of running exercise until exhaustion on global transcriptional profiles in porcine skeletal mu...
ORGANISM(S): Sus scrofa 
2012-07-12 | E-GEOD-30014 | biostudies-arrayexpress
ProteomicsEvidence for an RNAi-independent role of DICER-LIKE2 in conferring growth inhibition and basal antiviral resistance
Higher plants encode four or five DICER-LIKE (DCL) enzymes responsible for the production of small non-coding RNAs which function in RNA interference (RNAi). Different RNAi pathways in plants effect transposon silencing, antiviral defense and endogenous gene regulation. DCL2 acts genetically redunda...
ORGANISM(S): Arabidopsis Thaliana 
2024-07-26 | PXD046163 | panorama
Genomicsena-DATASET-AUH-06-07-2017-00:05:45:851-367 - samples
RNAseq data from the study: "Widespread DNA hypomethylation and differential gene expression in Turner syndrome".
EGAD00001003428 | EGA
GenomicsArray_dataset_Female
DNAm Case samples using Illumina Infinium 450K
EGAD00010001262 | EGA
GenomicsArray_dataset_TS
DNAm Case samples using Illumina Infinium 450K
EGAD00010001261 | EGA
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