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Unknown (663)
Proteomics (19)
Transcriptomics (16)
Metabolomics (3)

Organisms

Homo sapiens (11)
Mus musculus (5)
Arabidopsis thaliana (3)
Xylella fastidiosa (2)
Paracoccidioides brasiliensis (2)
Zea mays (2)
Bombus terrestris (2)
Microcoleus vaginatus (1)
Zika virus (1)
Bos taurus (1)
Amblyomma sculptum (1)
Canis lupus familiaris (1)
Magallana gigas (1)
Oryza sativa (1)

Repository

pride (18)
biostudies-arrayexpress (16)
MetaboLights (3)
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Tissue

Cell culture (3)
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Disease

Breast cancer (1)
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Technology Type

Mass Spectrometry (18)
Shotgun proteomics (12)
Mass spectrometry (2)
Bottom-up proteomics (2)
Gel-based experiment (2)
Mass spectrometry assay (1)
Affinity purification coupled with mass spectrometry proteomics (1)
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HDMSE (1)
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Instrument Platform

HPC cluster Lobo (1)
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Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative - reverse-phase (1)

Publication Date

2013 (5)
2022 (5)
2015 (4)
2018 (4)
2025 (3)
2021 (3)
2020 (2)
2016 (2)
2012 (2)
2026 (2)
2019 (2)
2024 (1)
2014 (1)
2010 (1)
2023 (1)

CHEBI ID

CHEBI:131498 (1)
CHEBI:132833 (1)
CHEBI:139402 (1)
CHEBI:139403 (1)
CHEBI:139404 (1)
CHEBI:139405 (1)
CHEBI:139406 (1)
CHEBI:139407 (1)
CHEBI:139408 (1)
CHEBI:139409 (1)
CHEBI:139410 (1)
CHEBI:139411 (1)
CHEBI:139414 (1)
CHEBI:139415 (1)
CHEBI:139416 (1)
CHEBI:139417 (1)
CHEBI:139418 (1)
CHEBI:139420 (1)
CHEBI:139421 (1)
CHEBI:139422 (1)
CHEBI:139423 (1)
CHEBI:139424 (1)
CHEBI:139425 (1)
CHEBI:139427 (1)
CHEBI:139428 (1)
CHEBI:139429 (1)
CHEBI:139431 (1)
CHEBI:139432 (1)
CHEBI:139433 (1)
CHEBI:139434 (1)

Metabolite Name

(+)-syringaresinol beta-D-glucoside (1)
(1S,3S,4R,5R)-3-{[(2E)-3-(3,4-dihydroxyphenyl)-2-propenoyl]oxy}-1,4,5-trihydroxycyclohexanecarboxylic acid (1)
(2E)-3-[4-(beta-D-Glucopyranosyloxy)-3-methoxyphenyl]acrylic acid (1)
(2E)-N-[2-(3,4-dihydroxyphenyl)ethyl]-3-(3,4-dimethoxyphenyl)acrylamide (1)
(3E)-1-hydroxy-4-[(1R)-2,6,6-trimethyl-4-oxo-2-cyclohexen-1-yl]-3-buten-2-yl beta-D-glucopyranoside (1)
(3E)-4-[(1S)-1-Hydroxy-2,6,6-trimethyl-4-oxo-2-cyclohexen-1-yl]-3-buten-2-yl beta-D-glucopyranoside (1)
(3R)-3,7-dimethyl-1,6-octadien-3-yl 6-O-alpha-L-arabinopyranosyl-beta-D-glucopyranoside (1)
(3R,5R)-3,4,5-tris{[(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy}-1-hydroxycyclohexane-1-carboxylic acid (1)
2,6-dihydroxy-2-[(4-hydroxyphenyl)methyl]-3-oxo-2,3-dihydro-1-benzofuran-4-yl hexopyranoside (1)
2-hydroxy-2-(4-hydroxybenzyl)succinic acid (1)
3,5-dihydroxy-2-(4-hydroxyphenyl)-4-oxo-3,4-dihydro-2H-chromen-7-yl hexopyranoside (1)
3-(4-hydroxyphenyl)-1-{2,4,6-trihydroxy-3,5-bis(2S,3R,4R,5S,6R)[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]phenyl}propan-1-one (1)
4-O-beta-D-glucosyl-4-coumaric acid (1)
4-O-trans-caffeoylquinic acid (1)
4-[4-(4-hydroxy-3-methoxyphenyl)tetrahydro-1H,3H-furo[3,4-c]furan-1-yl]-2-methoxyphenyl hexopyranoside (1)
4-{(1S,3aR,4S,6aR)-4-[4-(hexopyranosyloxy)-3-methoxyphenyl]tetrahydro-1H,3H-furo[3,4-c]furan-1-yl}-2-methoxyphenyl hexopyranoside (1)
5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxo-4H-1-benzopyran-3-yl 6-O-(6-deoxyhexopyranosyl)hexopyranoside (1)
5-{4-[4-(hexopyranosyloxy)-3,5-dimethoxyphenyl]tetrahydro-1H,3H-furo[3,4-c]furan-1-yl}-2-methoxyphenyl hexopyranoside (1)
8-[6-(3-{[6-O-(6-deoxy-alpha-L-mannopyranosyl)-beta-D-glucopyranosyl]oxy}-5,7-dihydroxy-4-oxo-4H-1-benzopyran-2-yl)-2,3-dihydroxyphenyl]-2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4-oxo-4H-1-benzopyran-3-yl 6-O-(6-deoxy-alpha-L-mannopyranosyl)-beta-D-glucopyranoside (1)
Acetylcholine (1)
Acetylputrescine (1)
Acetylserine (1)
Acetylserotonin (1)
Aconitic acid (1)
Asparagine (1)
Aspartic acid (1)
Butyryl-carnitine (1)
Citric acid (1)
Creatinine (1)
Cytosine (1)

Study type

Transcription profiling by array (11)
Cell line - High-throughput sequencing (1)
MicroRNA profiling by high throughput sequencing (1)
Comparative genomic hybridization by array (1)
RNA-seq of total RNA (1)
RNA-seq of coding RNA (1)

Release Date

2022 (93)
2021 (87)
2025 (75)
2023 (75)
2024 (71)
2019 (48)
2020 (44)
2018 (37)
2016 (26)
2017 (24)
2026 (21)
2015 (16)
2013 (16)
2012 (11)
2014 (10)
2010 (6)
2011 (6)
2008 (4)
2009 (2)
2006 (2)
1996 (2)
2005 (1)
2003 (1)
2001 (1)

Lab affiliation

Centro de Química Estrutural, Instituto Superior Técnico, ULisboa, Lisboa, Portugal (1)
Department of Biochemistry and Microbiology, L-Probe Lab Ghent University (1)
Department of Cell and Molecular Biology, University of Hawaii at Manoa, Honolulu, Hawaii 96822 (1)
Dept. of Oncology-Pathology, Karolinska Institutet, SciLifeLab, Stockholm, Sweden (1)
Federal University of Minas Gerais (1)
Federal University of Rio de Janeiro (1)
Institute of Integrative Biology Biosciences Building Crown Street University of Liverpool Liverpool L69 7ZB UK (1)
King's BHF Centre, King's College London, London, UK (1)
Maynooth University Department of Biology Maynooth University, Maynooth, Co. Kildare, Ireland. (1)
Molecular Oncology Research Center, Barretos Cancer Hospital, Barretos, São Paulo, Brazil Radiation Oncology Department, Barretos Cancer Hospital, Barretos, São Paulo, Brazil (1)
Parasitology, University of São Paulo/Institute of Biomedical Sciences, Brazil (1)
Professor at UINCAMP-BR Campinas State University - São Paulo - Brazil (1)
Protim, Inserm U1085, Irset Campus de Beaulieu 35042 Rennes Cedex, France (1)
Rudolf Virchow Zentrum – University of Würzburg (1)
Translational Biomarker Group, University of Geneva, Geneva, Switzerland (1)
Universidade Federal de Pelotas, Instituto de Biologia. Campus Capão do Leão - Prédio 14, Sala 304 Campus Universitário 96160000 - Capão do Leão, RS - Brasil Telefone: (51) 37147000 (1)
Universitätsklinikum Heidelberg Medizinische Klinik - Med.V Im Neuenheimer Feld 410 69120 Heidelberg (1)
VIB-UGent Center for Medical Biotechnology (1)

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Production of recombinant human annexin V by fed-batch cultivation.

Not available

S-EPMC4029966 | biostudies-literature

RNA polymerase V functions in Arabidopsis interphase heterochromatin organization independently of the 24-nt siRNA-directed DNA methylation pathway.

Not available

S-EPMC2902898 | biostudies-literature

Longitudinal Integration of Microbiota and Metabolomics Reveals Polyphenols-Driven Gut Ecosystem Dynamics

The gut microbiota and its """"""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""theatre of activi...

2026-07-03 | MTBLS14779 | MetaboLights

Gene expression modulation by paraquat-induced oxidative stress conditions in P. brasiliensis

Paracoccidioides brasiliensis is a thermodimorphic fungus associated with paracoccidioidomycosis (PCM), the most common systemic mycosis in Latin America. The infection is initiated by inhalation of environmental dispersed conidia produced by the saprophytic phase of the fungus. In the lungs, P. bra...

ORGANISM(S): Paracoccidioides brasiliensis

2013-06-14 | E-GEOD-41148 | biostudies-arrayexpress

Crystal structures of two deca-vanadates(V) with penta-aqua-manganese(II) pendant groups: (NMe4)2[V10O28{Mn(H2O)5}2]·5H2O and [NH3C(CH2OH)3]2[V10O28{Mn(H2O)5}2]·2H2O.

Not available

S-EPMC4384578 | biostudies-literature

Differential gene expression in Xylella fastidiosa 9a5c during co-cultivation with the endophytic bacteria Methylobacterium mesophilicum SR1.6/6

Citrus variegated chlorosis (CVC), caused by Xylella fastidiosa, is an important citrus disease that produces chlorotic injuries on leaves and reduced fruit size. This bacterium colonizes plant xylem, thereby interrupting sap flow. Other disease symptoms depend on environmental factors, since asympt...

ORGANISM(S): Xylella fastidiosa

2014-04-18 | E-GEOD-56901 | biostudies-arrayexpress

EVALUATION OF THE EFFECTS OF HUMIC ACIDS ON MAIZE ROOT ARCHITECTURE BY LABEL-FREE PROTEOMICS ANALYSIS

Humic substances have been widely used as plant growth promoters to improve the yield of agricultural crops. Root soluble protein profiles of 11 days after planting, cultivated with and without humic acids (50 mg C/L), were analysed using the label-free quantitative proteomic approach. The effects o...

ORGANISM(S): Zea mays (Maize)

2019-11-12 | PXD014407 | Pride

In Silico Study of the Anti-MYC Potential of Lanostane-Type Triterpenes.

Not available

S-EPMC11683602 | biostudies-literature

Global modulation of gene expression in Paracoccidioides brasiliensis in response to thioridazine

Phenothiazines are antipsychotic drugs used in the treatment of schizophrenia, which have been shown to present antimicrobial activity (in vitro and in vivo) against a great variety of pathogenic microorganisms, including bacteria, parasites (protozoa and helmints) and fungi. In this study, we used ...

ORGANISM(S): Paracoccidioides brasiliensis

2013-12-31 | E-GEOD-41881 | biostudies-arrayexpress

Development of a Tunable Dextran-PCL Biomaterial Photoink for High-Resolution DLP 3D Printing in Biomedical Applications.

Not available

S-EPMC12818721 | biostudies-literature

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