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TranscriptomicsDrosophila OSS cell small RNA libraries
High-throughput sequencing of Drosophila melanogaster small RNAs from OSS cells. total RNA, ~18-26nt RNAs isolated using PAGE, ligation to adapters requires 5' monophosphate and 3' OH For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Page...
ORGANISM(S): Drosophila melanogaster 
2009-06-08 | E-GEOD-15378 | biostudies-arrayexpress
TranscriptomicsDrosophila melanogaster small RNA sequence: Kc167 cells (Rubin lab)
modENCODE_submission_2374 This submission comes from a modENCODE project of Eric Lai. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We plan to generate a comprehensive catalog of expressed and functional microRNAs, and generate biological evidence for their re...
ORGANISM(S): Drosophila melanogaster 
2009-04-30 | E-GEOD-15899 | biostudies-arrayexpress
TranscriptomicsExpression analysis of Sphingomonas paucimobilis sp. EPA505 during biodegradation kinetics of various PAHs and detection of gene in a contaminated soil S3
Studying eight enzymes involved in the degradation of polycyclic aromatic hydrocarbons from the model strain Sphingomonas paucimobilis sp. EPA505 using a designed microarray of 8,048 probes. During the biodegradation kinetics with phenanthrene, fluoranthene or a mix of both pollutants, we identified...
ORGANISM(S): Sphingomonas paucimobilis 
2010-10-01 | E-GEOD-21402 | biostudies-arrayexpress
TranscriptomicsDrosophila melanogaster S2-GMR cells, second biological replicate
High-throughput sequencing of Drosophila melanogaster small RNAs from S2 cells. total RNA, ~18-26nt RNAs isolated using PAGE, ligation to adapters requires 5' monophosphate and 3' OH For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages...
ORGANISM(S): Drosophila melanogaster 
2009-01-22 | E-GEOD-14488 | biostudies-arrayexpress
TranscriptomicsDrosophila melanogaster small RNA sequence: female heads
High-throughput sequencing of Drosophila melanogaster small RNAs. total RNA, ~18-26nt RNAs isolated using PAGE, ligation to adapters requires 5' monophosphate and 3' OH Keywords: High-throughput solexa sequencing Small RNAs were sequenced from D. melanogaster female head. Raw sequences were clipped ...
ORGANISM(S): Drosophila melanogaster 
2008-04-22 | E-GEOD-10790 | biostudies-arrayexpress
TranscriptomicsHigh-throughput sequencing of Drosophila melanogaster small RNAs from S2R+ cells
High-throughput sequencing of Drosophila melanogaster small RNAs from S2R+ cells. total RNA, ~18-26nt RNAs isolated using PAGE, ligation to adapters requires 5' monophosphate and 3' OH For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pag...
ORGANISM(S): Drosophila melanogaster 
2008-12-04 | E-GEOD-13679 | biostudies-arrayexpress
TranscriptomicsKc-Rubin + Ecdysone smallRNA RNA-Seq
modENCODE_submission_2974 This submission comes from a modENCODE project of Eric Lai. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We plan to generate a comprehensive catalog of expressed and functional microRNAs, and generate biological evidence for their re...
ORGANISM(S): Drosophila melanogaster 
2010-10-18 | E-GEOD-24543 | biostudies-arrayexpress
TranscriptomicsDrosophila melanogaster Canton-S small RNA sequence: Adult Male Body
modENCODE_submission_2751 This submission comes from a modENCODE project of Eric Lai. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We plan to generate a comprehensive catalog of expressed and functional microRNAs, and generate biological evidence for their re...
ORGANISM(S): Drosophila melanogaster 
2010-10-18 | E-GEOD-24314 | biostudies-arrayexpress
ModelsRegan2022 - Mechanosensitive EMT model with autocrine TGFbeta signaling
This model is an expansion of the Regan2022 - Mechanosensitive EMT model (MODEL2208050001); it includes a TGFβ signaling module and autocrine signaling in mesenchymal cells. The expanded 150-node (630 link) modular model undergoes EMT triggered by biomechanical and growth signaling crosstalk, or by ...
2023-12-13 | MODEL2208050002 | BioModels
ModelsRegan2022 - Mechanosensitive EMT model
This file contains a 136-node modular Boolean network model of EMT triggered by biomechanical and growth signaling crosstalk, linked to a published network of epithelial contact inhibition, proliferation, and apoptosis (MODEL2006170001). This model reproduces the ability of the core EMT transcriptio...
2023-12-13 | MODEL2208050001 | BioModels
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