Oka M M - OmicsDI

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Unknown (1225)
Transcriptomics (26)
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Homo sapiens (29)
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Arabidopsis thaliana (1)
cellular organisms (1)
HIV-1 vector pNL4-3 (1)
Human immunodeficiency virus 1 (1)
Xenopus laevis (1)

Organisms

Mus musculus (2)

Repository

biostudies-arrayexpress (26)
pride (18)
EGA (4)
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geo (1)
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Disease

Melanoma (2)
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Colorectal cancer (1)
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Technology Type

Mass Spectrometry (18)
Shotgun proteomics (12)
Bottom-up proteomics (4)
Data-dependent acquisition (3)
Affinity purification coupled with mass spectrometry proteomics (2)
Illumina HiSeq 2000, Infinium HumanMethylation450 BeadChip (1)
Mass spectrometry (1)
Mass spectrometry assay (1)
Immunopeptidomics (1)

Instrument Platform

LTQ Orbitrap (1)
Liquid Chromatography MS - alternating - reverse-phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2010 (6)
2014 (5)
2025 (5)
2023 (5)
2013 (4)
2018 (3)
2016 (3)
2015 (3)
2012 (3)
2021 (3)
2007 (2)
2005 (2)
2019 (2)
2009 (1)
2008 (1)
2026 (1)
2024 (1)
2022 (1)
2020 (1)

CHEBI ID

CHEBI:132274 (1)
CHEBI:132276 (1)
CHEBI:138645 (1)
CHEBI:138648 (1)
CHEBI:143095 (1)
CHEBI:149776 (1)
CHEBI:15544 (1)
CHEBI:15545 (1)
CHEBI:15547 (1)
CHEBI:15551 (1)
CHEBI:15558 (1)
CHEBI:15756 (1)
CHEBI:15843 (1)
CHEBI:16196 (1)
CHEBI:172116 (1)
CHEBI:17351 (1)
CHEBI:182742 (1)
CHEBI:189454 (1)
CHEBI:189852 (1)
CHEBI:192538 (1)
CHEBI:192539 (1)
CHEBI:192540 (1)
CHEBI:27432 (1)
CHEBI:27485 (1)
CHEBI:27595 (1)
CHEBI:28158 (1)
CHEBI:28364 (1)
CHEBI:28442 (1)
CHEBI:28661 (1)
CHEBI:28667 (1)

Metabolite Name

(+/-)9(10)-EpOME (1)
(-)-Prostaglandin E1 (1)
(-)-Prostaglandin E2 (1)
(11S,12R)-EET (1)
(4S,5Z,7E,9E,11R,13Z,15E,17S,19Z)-4,11,17-Trihydroxy-5,7,9,13,15,19-docosahexaenoic acid (1)
(5xi,9xi)-17-Hydroxykaur-15-en-19-oic acid (1)
10-hydroxy octadecanoic acid (1)
10-hydroxy-12(Z)-octadecenoic acid (1)
10-oxo-12(Z)-octadecenoic acid (1)
10-oxo-octadecanoic acid (1)
11-dehydo Thromboxane B2 (1)
11-epi-prostaglandin F2alpha (1)
12(S)-HETrE (1)
12(S)-HHT (1)
14S(15R)-EET (1)
15(S)-HETE (1)
15-deoxy-delta12,14-Prostaglandin J2 (1)
15-keto Prostaglandin E2 (1)
15-keto Prostaglandin F2alpha (1)
18-HEPE (1)
2,3-dinor-8-iso Prostaglandin F2alpha (1)
4-Dodecylbenzenesulfonic acid (1)
6-Keto prostaglandin F1alpha (-d4) (1)
6-keto-ProstaglandinF1alpha (1)
8,12-iso-iPF2alpha-VI (1)
8-hydroxy-deoxyguanosine (1)
8-hydroxy-guanosine (1)
8-iso-prostaglandin F1alpha (1)
Alpha-Linolenic acid (1)
Arachidic acid (1)

First Public Date

2020 (1)
2014 (1)

Study type

Transcription profiling by array (20)
Methylation profiling by array (3)
Unknown experiment type (1)
ChIP-seq (1)
RNA-seq of coding RNA (1)

Release Date

2022 (131)
2025 (121)
2023 (119)
2024 (117)
2021 (105)
2020 (90)
2019 (74)
2017 (57)
2016 (56)
2018 (54)
2014 (53)
2015 (52)
2010 (34)
2012 (26)
2013 (23)
2007 (21)
2008 (18)
2011 (18)
2009 (16)
2026 (16)
2003 (9)
2006 (8)
2005 (7)
2001 (7)
2000 (6)
2004 (5)
2002 (2)
1999 (2)
1998 (2)
1997 (2)

Lab affiliation

CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (4)
Institute for Stroke and Dementia Research (ISD) Klinikum der Universität München Feodor-Lynen-Str. 17 81377 Munich Germany (2)
Proteomics and Signal Transduction, Max-Planck-Institute of Biochemistry, Am Klopferspitz 18, 82152 Martinsried, Germany (2)
CRUK Beatson Institute, Switchback Road, Glasgow G61 1BD, UK. (1)
CRUK Scotland Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (1)
Cancer Research UK Scotland Institute (Formerly the Cancer Research UK Beatson Institute) Garscube Estate Switchback Road Bearsden Glasgow, G61 1BD (1)
Department of Genetics, Research Institute of Environmental Medicine (RIEM), Nagoya University (1)
Department of Neuropathology, Medical Research institute and Center for Brain Integration Research, Tokyo Medical and Dental University (1)
Dept. Cell Biology and Molecular Medicince, Rutgers-New Jersey Mediccal School, Newark NJ (1)
Hubrecht Institute, KNAW (Royal Netherlands Academy of Arts and Sciences), Utrecht, The Netherlands (1)
Max Planck Institute for the Science of Human History Department of Archaeogenetics (1)
Nuffield Department Medicine, University of Oxford, Oxford, OX3 7BN, United Kingdom. (1)
Nuffield Department of Medicine, University of Oxford, Oxford, UK (1)

Tags

xref:PubMed:33057193 (1)
xref:PubMed:16098828 (1)

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Photoliquefaction and phase transition of m-bisazobenzenes give molecular solar thermal fuels with a high energy density.

Not available

S-EPMC10414017 | biostudies-literature

Botulinum toxin A complex exploits intestinal M cells to enter the host and exert neurotoxicity.

Not available

S-EPMC4339894 | biostudies-literature

Description and molecular phylogeny of a new species of Phoronis (Phoronida) from Japan, with a redescription of topotypes of P. ijimai Oka, 1897.

Not available

S-EPMC3978224 | biostudies-literature

Mitochondrial ribosomal RNA is the target of functionally dominant hotspot mutations in cancer

The vast majority of recurrent somatic mutations arising in tumors affect protein-coding genes in the nuclear genome. Here, through population-scale analysis of 14,079 whole tumor genomes, we report the discovery of highly recurrent mutations affecting both the small (12S, MT-RNR1) and large (16S, M...

ORGANISM(S): Homo sapiens (Human)

2025-09-11 | PXD057390 | Pride

Proteomics reveals dynamic assembly of repair complexes during bypass of DNA cross-links part 2 of 2: AP-MS DATA (QUBIC)

DNA interstrand crosslinks (ICLs) block replication fork progression by inhibiting DNA strand separation. Repair of ICLs requires sequential incisions, translesion DNA synthesis, and homologous recombination, but the full set of factors involved in these transactions remains unknown. Here we establi...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2016-03-13 | MSV000079577 | MassIVE

Pre-Slavic and Slavic Interaction at Eastern Periphery of Slavic Expansion in Northeastern Europe (Y-Gene Pools of Volga-Oka Region).

Not available

S-EPMC12562464 | biostudies-literature

Oxidation-induced nanolite crystallization triggered the 2021 eruption of Fukutoku-Oka-no-Ba, Japan.

Not available

S-EPMC10170078 | biostudies-literature

Metabolic abnormalities in adult T-cell leukemia/lymphoma and induction of specific leukemic cell death using photodynamic therapy.

Not available

S-EPMC6175925 | biostudies-literature

Electrochemical Production of Glycolic Acid from Oxalic Acid Using a Polymer Electrolyte Alcohol Electrosynthesis Cell Containing a Porous TiO₂ Catalyst.