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MetabolomicsOrgan-specific accumulation of flavonoids and terpenoids in Myricaria laxiflora based on non-targeted metabolomics
Background Myricaria laxiflora, an endangered species endemic to the water-level fluctuation zone of the Yangtze River, plays a critical role in riparian ecosystem conservation. However, a comprehensive understanding of its organ-specific metabolic composition remains scarce. Method A non-targeted m...
2026-04-24 | MTBLS14367 | MetaboLights
TranscriptomicsSteroid Pretreatment of Organ Donors to Prevent Postischemic Renal Allograft Failure: A Randomized, Controlled Trial
Comparison between pretreated donor grafts corticosteroid vs. placebo Prospective, randomised, double-blind, placebo-control trial, xls files contain normalized data (Default Total Intensity Normalization, see Stanford Microarray Database website), gpr files the raw data
ORGANISM(S): Homo sapiens 
2010-08-17 | E-GEOD-14700 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of rat organ of Corti (OC), modiolus (MOD) and stria vascularis (SV) of newborns
The aim of this study was to characterize the basal expression of OC, MOD and SV of newborn rats (3-5 day old) and its changes by short–term cultivation (24 hrs) and mild hypoxia (5 hrs). Three varieties of tissue samples were analyzed (i) Freshly prepared tissue, used as control; (ii) cultures he...
ORGANISM(S): Rattus norvegicus 
2008-06-13 | E-GEOD-5446 | biostudies-arrayexpress
TranscriptomicsDrosophila Johnston organ genes
Hemizygous ato[1]/Df(3R)p[13] null mutants lack Johnston organ (JO) in their 2nd antennal segment. We screened for genes that are expressed in JO by comparing the 2nd antennal segment transcriptomes between ato[1]/Df(3R)p[13] mutants and balanced Df(3R)p[13]/TM3 and ato[1]/TM3 controls. To assess t...
ORGANISM(S): Drosophila melanogaster 
2012-08-31 | E-MEXP-3609 | biostudies-arrayexpress
TranscriptomicsMaize tumors caused by Ustilago maydis require organ-specific genes in host and pathogen
Two-organism transcriptome profiling of infected seedling, adult leaf, and tassel demonstrated that both the host and pathogen exhibit organ-specific expression programs. Phenotypic screening of U. maydis mutants deleted for suites of secreted protein genes and maize growth mutants demonstrated org...
ORGANISM(S): Zea mays 
2010-04-01 | E-GEOD-20130 | biostudies-arrayexpress
TranscriptomicsGene expression profile in pelvic organ prolapse
Introduction and Hypothesis: Identify processes contributing to pelvic organ prolapse (POP) by transcriptional profiling of pelvic connective tissue in conjunction with light microscopy. Methods: We performed a frequency matched case-control study of women undergoing hysterectomy. Total RNA, extract...
ORGANISM(S): Homo sapiens 
2008-09-19 | E-GEOD-12852 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse allogeneic cells after treatment with organ-derived dendritic cells
Transcriptional response of murine allogeneic T cells (B10.BR) after; stimulation with different organ-derived (spleen, liver, peripheral and; mesenteric lymph nodes) dendritic cells (C57BL/6) in vitro Experiment Overall Design: We stimulated B10.BR T cells with dendritic cells derived from differen...
ORGANISM(S): Mus musculus 
2008-06-13 | E-GEOD-5503 | biostudies-arrayexpress
ProteomicsIn-depth assembly of organ and development dissected Picrorhiza kurroa proteome map using mass spectrometry
Background Picrorhiza kurroa, being a rich source of phytochemicals, is a promising higher altitude medicinal herb of Himalaya. The medicinal potential is attributed to picrosides i.e. iridoid glycosides, which synthesized in organ-specific manner through highly complex pathways. Here, we present a ...
ORGANISM(S): Picrorhiza kurrooa 
2022-02-15 | PXD030263 | Pride
Picrosides Ptms Picrorhiza kurroa Proteome Rbps Metabolites 
TranscriptomicsTranscriptional Analysis of 1M Regions in Glycine max Using Tiling Microarrays
We report here a transcriptonal analysis in six different organ types of a approximately 1 Mb region in soybean (Glycine max) which is sytenic with legume (Medicago truncatula). We used oligonucleotide tiling microarrays to detecte transcription of over 80% of the predicted genes in both species. We...
ORGANISM(S): Glycine max 
2010-05-26 | E-GEOD-10056 | biostudies-arrayexpress
ProteomicsTissue and organ matrix arrays for high throughput screening and systems analysis of cell function
Cell and protein arrays have demonstrated remarkable utility in the high-throughput evaluation of biological responses; however, they lack the complexity of native tissue and organs and cannot replicate the environment of mature normal or diseased tissues. Here, we describe the development of tissue...
ORGANISM(S): Sus scrofa domesticus (domestic pig) 
2015-09-28 | PXD002571 | Pride
Tissue array Matrix Organ array Ecm 
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