Otto W W - OmicsDI

Show results for

Unknown (770)
Transcriptomics (138)
Proteomics (64)
Genomics (9)
Metabolomics (5)
Other (2)
Multiomics (1)

Organisms

Homo sapiens (75)
Mus musculus (48)
Staphylococcus aureus (15)
Danio rerio (7)
Vibrio cholerae (6)
Rattus norvegicus (4)
Escherichia coli (4)
Staphylococcus epidermidis (3)
Clostridioides difficile 630 (3)
Pachycara brachycephalum (2)
Trypanosoma cruzi (2)
Bos taurus (2)
Arabidopsis thaliana (2)
Saccharomyces cerevisiae (2)
Lactococcus cremoris subsp. cremoris MG1363 (2)
Lactococcus phage (2)
Bacillus subtilis subsp. subtilis str. 168 (1)
Plasmodium falciparum 3D7 (1)
Bacillus subtilis (1)
Ovis aries (1)
Caenorhabditis elegans (1)
Plasmodium falciparum (1)
Escherichia coli K-12 (1)
Plasmodium falciparum 7G8 (1)
Drosophila melanogaster (1)
46170 (1)
Actinoplanes sp. SE50/110 (1)
Babesia bigemina (1)
Babesia sp. (1)
Bacillus pumilus (1)

Repository

biostudies-arrayexpress (143)
pride (60)
MetaboLights (5)
EGA (4)
MassIVE (4)
GPMDB (2)

Tissue

Cell culture (7)
Blood cell (3)
Fibroblast (3)
Blood (2)
Liver (2)
Skeletal muscle (2)
Skin (2)
Bile (1)
Blood plasma (1)
Blood platelet (1)
Brain (1)
CNS neuron (sensu Vertebrata) (1)
Cardiocyte differentiation (1)
Cerebrospinal fluid (1)
Early embryonic cell (1)
Embryo (1)
H9c2 cell (1)
HeLa cell (1)
Heart (1)
Keratinocyte (1)
Kidney (1)
MEF cell (1)
Monocyte (1)
Neutrophil (1)
Platelet (1)
Pluripotent stem cell (1)
Quadriceps (1)
Smooth muscle myoblast (1)
T cell (1)
Urine (1)

Disease

Not Available (2)
Breast cancer (2)
Fish tuberculosis (1)
Acute leukemia (1)
Amyotrophic lateral sclerosis (1)
Bacterial gastritis (1)
Bacterial infectious disease (1)
Bladder disease (1)
Cervix carcinoma (1)
Glanzmann's thrombasthenia (1)
Gray platelet syndrome (1)
Kidney disease (1)
Marinesco-Sjogren syndrome (1)
Metabolic dysfunction-associated steatotic liver disease (1)
Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency (1)
Myopathy (1)
Myotonic dystrophy type 1 (1)
Neuroblastoma (1)
Psoriasis (1)
Seizure (1)
Severe acute respiratory syndrome (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (60)
Shotgun proteomics (40)
Bottom-up proteomics (12)
Data-dependent acquisition (8)
Mass spectrometry (4)
Data-independent acquisition (3)
Affinity purification coupled with mass spectrometry proteomics (2)
Gel-based experiment (2)
SRM/MRM (2)
Top-down proteomics (2)
Mass spectrometry assay (1)
Affinity proteomics (1)
All-ion fragmentation (1)
HDMSE (1)

Instrument Platform

NextSeq 500 (10)
Illumina NovaSeq 6000 (9)
Illumina HiSeq 2500 (6)
Illumina HiSeq 4000 (4)
Q Exactive (3)
Liquid Chromatography MS - positive - reverse phase (3)
NextSeq 550 (2)
Illumina HiSeq 2000 (2)
Instrument (2)
Flow injection analysis MS - negative (2)
Liquid Chromatography MS - negative - reverse phase (2)
10X chemistry 3' v3 (1)
FACSAria III (1)
Affymetrix Array scanner (1)
Affymetrix hybridization station (1)
10X chromium (1)
BDRhapsody (1)
418 [Affymetrix] (1)
ScanArray Express HT [PerkinElmer] (1)
DNBSEQ-G400 (1)
Illumina MiSeq (1)
LTQ Orbitrap Velos (1)
Flow injection analysis MS - positive (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2014 (24)
2012 (17)
2011 (17)
2010 (17)
2015 (14)
2022 (12)
2026 (10)
2024 (10)
2020 (10)
2018 (10)
2016 (10)
2008 (10)
2021 (9)
2025 (7)
2023 (7)
2017 (7)
2013 (6)
2009 (5)
2019 (4)
2006 (2)
2007 (1)
2005 (1)

CHEBI ID

CHEBI:15428 (2)
CHEBI:15891 (2)
CHEBI:16449 (2)
CHEBI:16610 (2)
CHEBI:16737 (2)
CHEBI:16811 (2)
CHEBI:17126 (2)
CHEBI:17822 (2)
CHEBI:18186 (2)
CHEBI:18211 (2)
CHEBI:18237 (2)
CHEBI:18257 (2)
CHEBI:22653 (2)
CHEBI:22660 (2)
CHEBI:24898 (2)
CHEBI:25017 (2)
CHEBI:25094 (2)
CHEBI:26271 (2)
CHEBI:26986 (2)
CHEBI:27266 (2)
CHEBI:27570 (2)
CHEBI:27897 (2)
CHEBI:28044 (2)
CHEBI:28300 (2)
CHEBI:28683 (2)
CHEBI:28790 (2)
CHEBI:28867 (2)
CHEBI:29016 (2)
CHEBI:30769 (2)
CHEBI:37024 (2)

Metabolite Name

AMP (2)
Carnosine (2)
Creatinine (2)
Histamine (2)
Taurine (2)
(+)-(1R,2R)-1,2-Diphenylethane-1,2-diol (1)
(+/-)-6-Acetonyldihydrochelerythrine (1)
(-)-Nopol (1)
(-)-trans-Carveol (1)
(10S,11S)-Pterosin C (1)
(1E,3E)-4-Hydroxybuta-1,3-diene-1,2,4-tricarboxylate (1)
(2-hydroxy-2-{9-hydroxy-7-oxo-2H,3H,7H-furo[3,2-g]chromen-2-yl}propoxy)sulf... (1)
(22Alpha)-hydroxy-campest-4-en-3-one (1)
(3''x,5''a,9''x,10''b)-O-(3-Hydroxy-6-oxo-7-drimen-11-yl)umbelliferone (1)
(3R,7R)-1,3,7-Octanetriol (1)
(3S,5R,6S,7E,9x)-7-Megastigmene-3,6,9-triol 9-glucoside (1)
(3S,7E,9R)-4,7-Megastigmadiene-3,9-diol 9-[apiosyl-(1->6)-glucoside] (1)
(3Z,6Z)-3,6-Nonadien-1-ol (1)
(3beta,22E)-26,27-Dinorergosta-5,22-dien-3-ol (1)
(4-{3-[2,4-dihydroxy-5-(3-methylbut-2-en-1-yl)phenyl]-2-hydroxy-3-oxopropyl... (1)
(5-{4-[2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxy-3,4-dihydro-2H-1-benzopyran... (1)
(7''R,8''R)-4,7''-Epoxy-3''-methoxy-4'',5,9,9''-lignanetetrol 9''-glucoside (1)
(8E,15E)-1,8,15-Heptadecatriene-11,13-diyne (1)
(9Z,11E,13E,15Z)-4-Oxo-9,11,13,15-octadecatetraenoic acid (1)
(Ac)2-L-Lys-D-Ala (1)
(Iso)Citrate (1)
(Iso)Leucine (1)
(N(1) + N(8))-acetylspermidine (1)
(R)-1,3-Octanediol (1)
(R)-2-Benzylsuccinate (1)

Modification

15.99491 (1)
15.994915 (1)
4x(15)N labeled L-arginine (1)
57.02146 (1)
57.021464 (1)

Study type

Transcription profiling by array (85)
RNA-seq of coding RNA from single cells (15)
RNA-seq of coding RNA (11)
Comparative genomic hybridization by array (7)
Methylation profiling by array (5)
ChIP-seq (3)
RNA-seq of total RNA (3)
ChIP-chip by tiling array (2)
Animal - High-throughput sequencing (2)
DNA-seq (2)
Unknown experiment type (1)
Human - Single-cell sequencing (1)
Human - High-throughput sequencing (1)
Cell line - High-throughput sequencing (1)
Trajectory (1)
RNAi profiling by array (1)
RIP-seq (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (94)
2025 (90)
2021 (85)
2023 (77)
2020 (66)
2024 (65)
2015 (45)
2016 (42)
2014 (42)
2019 (39)
2018 (38)
2012 (38)
2010 (34)
2017 (32)
2013 (31)
2011 (30)
2026 (16)
2008 (15)
2009 (12)
2006 (8)
2005 (5)
2007 (4)
2004 (3)
2003 (1)
1999 (1)

Lab affiliation

Center for Functional Protein Assemblies (CPA), Department of Bioscience, TUM School of Natural Sciences, Technical University of Munich (TUM), Ernst-Otto-Fischer-Stra?e 8, 85748 Garching, Germany (2)
Institute for Microbiology Department of Microbial Proteomics Ernst-Moritz-Arndt-University Greifswald F.-L.-Jahn-Str. 15 17489 Greifswald phone: +49 3834 864073 fax: +49 3834 864202 (2)
Andreas Otto, Institute for Microbiology, Ernst-Moritz-Arndt-University of Greifswald, F.-L. Jahnstrasse 15, 17489 Greifswald, Germany (1)
Centre for Functional Protein Assemblies, Technical University of Munich, Ernst-Otto-Fischer-Straße 8, D-85748 Garching, Germany. (1)
Christian-Albrechts-Universität zu Kiel Institute of Biochemistry Eduard-Buchner-Haus Otto-Hahn-Platz 9 D-24118 Kiel (1)
Department of Cell Biology, Harvard Medical School, Boston, USA (1)
Department of General Pediatrics, Neonatology and Pediatric Cardiology, Heinrich Heine University, Medical Faculty, Düsseldorf, Germany (1)
Department of Infection Biology, Institute of Infection and Global Health, University of Liverpool, Liverpool, UK. (1)
Department of Medicine, Division of Nephrology, Icahn School of Medicine at Mount Sinai, New York, NY, USA. (1)
Department of Microbial Proteomics and Mass Spectrometry, Ernst-Moritz-Arndt-University Greifswald, Germany (1)
Department of Microbial Proteomics, Institute for Microbiology, Ernst-Moritz-Arndt-University-Greifswald, Friedrich-Ludwig-Jahn-Straße 15, 17487 Greifswald (1)
Department of Microbial Proteomics, Institute for Microbiology, University of Greifswald, Greifswald, Germany (1)
Department of Microbial Proteomics, Institute of Microbiology, University of Greifswald, D-17489 Greifswald, Germany (1)
Department of Proteomics, Helmholtz Centre for Environmental Research - UFZ, Permoserstrasse 15, 04318 Leipzig, Germany (1)
Department of Proteomics, Helmholtz Centre for Environmental Research – UFZ, Permoserstr. 15, 04318 Leipzig, Germany (1)
Dr. Andreas Otto Institute for Microbiology Department of Microbial Proteomics Ernst-Moritz-Arndt-University Greifswald F.-L.-Jahn-Str. 15 17489 Greifswald (1)
Dr. rer. nat. Dirk Benndorf, Bioprocess Engineering, Otto von Guericke University Magdeburg, Universitätsplatz 2, D-39106 Magdeburg, Germany (1)
German Center for Neurodegenerative Diseases (DZNE e.V.), Ulm, Germany Department of Neurology, Ulm University Hospital, Ulm, Germany (1)
Group Leader Protein Dynamics ISAS e.V. Otto-Hahn-Straße 6b 44227 Dortmund, Germany (1)
Group Leader Protein Dynamics Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V. Otto-Hahn-Straße 6b 44227 Dortmund, Germany (1)
Infection Biology (1)
Institut fuer Mikrobiologie EMAU Greifswald (1)
Institut für Mikrobiologie Dept. Mikrobielle Proteomik Universität Greifswald Felix-Hausdorff-Str. 8 17489 Greifswald (1)
Institute for Microbiology, Department of Microbial Proteomics, University of Greifswald, Greifswald, Germany (1)
Institute of Molecular Plant Biology, Department of Biology, ETH Zurich, Switzerland (1)
Kempa Lab - Quantitative Proteomics and Metabolomics Berlin Institute for Medical Systems Biology (BIMSB) Max-Delbrück-Centrum für Molekulare Medizin in der Helmholtz-Gemeinschaft Hannoversche Straße 28 10115 Berlin (1)
Laboratory for Systems Theory and Automatic Control, Institute for Automation Engineering (IFAT), Otto-von-Guericke University Magdeburg, 39106 Magdeburg, Germany (1)
Leibniz-Institut für Analytische Wissenschaften - ISAS - e.V. Otto-Hahn-Str. 6b, 44227 Dortmund, Germany (1)
Leibniz-Institut für Analytische Wissenschaften - ISAS - e.V. Otto-Hahn-Strasse 6b 44227 Dortmund Germany (1)
Leibniz-Institut für Analytische Wissenschaften - ISAS - e.V. Otto-Hahn-Straße 6b 44227 Dortmund, Germany (1)

Previous page
1 / 99
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 99
Next page

Sort by:

Relevance

Page size

Tigecycline as salvage treatment of febrile neutropenia in patients with haematological malignancies-a retrospective single-centre analysis of 200 cases.

Not available

S-EPMC10444688 | biostudies-literature

The response of B. pumilus cells to glucose starvation

In this study the proteome of soluble intracellular and extracellular samples have been analysed of the gram positive BAcillus pumilus.

ORGANISM(S): Bacillus pumilus

2018-07-05 | PXD005602 | Pride

Keywords bacillus pumilus/ glucose starvation/ proteome

Proteome Analysis of Actinoplanes sp. SE50/110

The acarviose metabolite acarbose is an a glucosidase inhibitor produced by Actinoplanes sp. SE50/110. It is medically important because it is used in the treatment of type 2 diabetes. In this work a comprehensive proteome analysis of Actinoplanes sp. SE50/110 was carried out. The associated txt and...

ORGANISM(S): Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110)

2015-10-21 | PXD001497 | Pride

Actinoplanes sp. se50/110

High-fat diet induced gene expression changes in mouse retina may be prevented by introducing bilberries in diet

Obesity and diabetes associated visual impairment and vascular dysfunctions are increasing reasons for vision loss. The detailed mechanisms in these diseases are still largely unknown, but mice models have been useful to study these mechanisms and explore the detailed effects of potential compounds....

ORGANISM(S): Mus musculus

2012-09-08 | E-GEOD-34154 | biostudies-arrayexpress

Transcriptome analysis of Bacillus subtilis salt stress adaptation

Whole-genome microarray technology and state-of-the-art proteomic techniques were applied to provide a global and time-resolved picture of the physiological response of B. subtilis cells exposed to a severe and sudden osmotic up-shift. This combined experimental approach provided quantitative data f...

ORGANISM(S): Bacillus subtilis

2010-05-19 | E-GEOD-18345 | biostudies-arrayexpress

Quantifying 35 transcripts in a single tube: model-based calibration of the GeXP multiplex RT-PCR assay.

Not available

S-EPMC8048187 | biostudies-literature

A Randomized Pilot Trial to Evaluate the Bioavailability of Natural versus Synthetic Vitamin B Complexes in Healthy Humans and Their Effects on Homocysteine, Oxidative Stress, and Antioxidant Levels.

Not available

S-EPMC6930747 | biostudies-literature

Air-liquid interface cultures trigger a metabolic shift in intestinal epithelial cells (IPEC-1).

Not available

S-EPMC10191962 | biostudies-literature

Double action of HPMCAS as a dry binder and precipitation inhibitor in ASD tablet formulations of nifedipine prepared by hot-melt extrusion.