Outer membrane vesicles (omvs)

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Unknown (518)
Proteomics (89)
Genomics (54)
Transcriptomics (17)
Other (1)
Metabolomics (1)

Organisms

Escherichia coli (8)
Mus musculus (7)
Homo sapiens (6)
Xylella fastidiosa (2)
Pseudomonas aeruginosa PAO1 (2)
Pseudomonas aeruginosa (2)
Klebsiella pneumoniae (2)
Euprymna scolopes (1)
Legionella pneumophila (1)
Pseudomonas paraeruginosa PA7 (1)
Pseudomonas aeruginosa PA14 (1)
Neisseria gonorrhoeae (1)
Salmonella enterica subsp. enterica serovar Typhimurium (1)
Borreliella burgdorferi (1)
Escherichia coli str. K-12 substr. MG1655 (1)
synthetic construct (1)
Staphylococcus aureus (1)
Acinetobacter baumannii A424 (1)
Aeromonas hydrophila subsp. hydrophila ATCC 7966 (1)
Danio rerio (1)
Escherichia coli Nissle 1917 (1)
Escherichia coli-Thermotoga shuttle vector pDH10 (1)
Fusobacterium vincentii (1)
Glaesserella parasuis (1)
Klebsiella pneumoniae subsp. pneumoniae HS11286 (1)
Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (1)
Parabacteroides distasonis ATCC 8503 (1)
Parabacteroides goldsteinii DSM 19448 = WAL 12034 (1)
Penaeus vannamei (1)
Pseudomonas syringae pv. tomato str. DC3000 (1)

Organisms

Mus musculus (6)
Homo sapiens (5)
Pseudomonas aeruginosa (2)
Klebsiella pneumoniae (2)
Serratia quinivorans (1)
Pseudomonas aeruginosa PA14 (1)
Xanthomonas oryzae pv. oryzicola (1)
Borreliella burgdorferi (1)
Escherichia coli BL21(DE3) (1)
Euprymna scolopes (1)
unidentified (1)

Repository

pride (56)
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biostudies-arrayexpress (4)
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PAXDB (1)

Tissue

Cell culture (9)
Cell suspension culture (3)
Blood (2)
Epithelial cell (2)
Extracellular vesicle (2)
Prokaryotic cell (2)
Blood cell (1)
Culture fluid (1)
Germ (1)
Macrophage (1)
Permanent cell line cell (1)
Photosynthetic cell (1)
Urine (1)
Vesicle (1)
Vesicle budding from membrane (1)

Disease

Disease free (6)
Not Available (1)
Periodontitis (1)
Pneumonia (1)
Urinary tract infection (1)

Technology Type

Mass Spectrometry (56)
Shotgun proteomics (28)
Bottom-up proteomics (18)
Gel-based experiment (10)
Data-dependent acquisition (7)
Mass spectrometry assay (1)
Data-independent acquisition (1)
MSE (1)
Top-down proteomics (1)

Instrument Platform

TimsTOF Pro 2 (2)
NextSeq 1000 (1)
Illumina MiSeq (1)
Instrument (1)
LC-QQQ Shimadzu 8030 (1)
LTQ Orbitrap Velos (1)
NanoACQUITY UPLC (1)
Orbitrap Fusion Lumos (1)
Q Exactive HF-X (1)
Q Exactive Plus (1)
Synapt G2-S HDMS (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
LTQ XL (ICN) (1)
Thermo Finnigan LTQ XL (1)

Publication Date

2025 (15)
2024 (14)
2026 (12)
2023 (12)
2022 (10)
2021 (8)
2016 (4)
2019 (4)
2012 (3)
2018 (3)
2020 (3)
2017 (3)
2015 (2)
2014 (1)
2013 (1)
2011 (1)

UNIPROT ID/AC

208964.PA4212 (1)
208964.PA4213 (1)
208964.PA4214 (1)
208964.PA4215 (1)
208964.PA4216 (1)
208964.PA4277 (1)
3MGH_PSEAE (1)
6PGL_PSEAE (1)
A2MGH_PSEAE (1)
AAT_PSEAE (1)
ACCA_PSEAE (1)
ACCC_PSEAE (1)
ACCD_PSEAE (1)
ACEA_PSEAE (1)
ACEK_PSEAE (1)
ACKA_PSEAE (1)
ACNA_PSEAE (1)
ACNB_PSEAE (1)
ACSA1_PSEAE (1)
ACSA2_PSEAE (1)
AGUA_PSEAE (1)
AHPF_PSEAE (1)
AK_PSEAE (1)
ALF_PSEAE (1)
ALG44_PSEAE (1)
ALGA_PSEAE (1)
ALGB_PSEAE (1)
ALGC_PSEAE (1)
ALGP_PSEAE (1)
ALGR_PSEAE (1)

Metabolite Name

5-O-Methylsulochrin (1)
Rac-2-Despiperidyl-2-aminorepaglinide (1)
[1-hydroxy-1-(4-methoxyphenyl)propan-2-yl] 4-methoxybenzoate (1)
Desethyleneciprofloxacin (1)
5-Amino-1-cyclopropyl-7-[(3R,5S)-3,5-dimethylpiperazin-1-yl]-6,8-difluoro-4-oxo-1,4-dihydroquinoline-3-carboxylic acid (1)
ROTENONE (1)
Propylpyrazoletriol (1)
Cis-Melilotoside (1)
Resorufin (1)
Propofol .beta.-D-glucuronide (1)
Flubendazole (1)
Marbofloxacin (1)
Hydromorphone-3-.beta.-D-glucuronide (1)
2,2`,4,4`-Tetrahydroxybenzophenone (1)
Methyl 7-(acetyloxy)-1-(hexopyranosyloxy)-5-hydroxy-7-methyl-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylate (1)
2-Docosahexaenoyl-1-stearoyl-sn-glycero-3-phosphoserine (1)
Givinostat (1)
Soyasapogenol B base + O-HexA-dHex-Pen (1)
3-[[4-(4-Chlorophenyl)piperazino]methyl]-1H-pyrrolo[2,3-b]pyridine (1)
L-RHAMNOSE (1)
Isoimperatorin (1)
(3E)-4-(1-Hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl)but-3-en-2-yl 6-O-pentopyranosylhexopyranoside (1)
[3-(hexadecanoyloxy)-2-[icosa-5.8.11-trienoyloxy]propoxy]({[2.3.4.5.6-pentahydroxycyclohexyl]oxy})phosphinic acid (1)
1,2-Di(4Z,7Z,10Z,13Z,16Z,19Z-docosahexaenoyl)-sn-glycero-3-phosphoethanolamine (1)
2-Chloro-5-(2H-tetrazol-5-yl)-4-((thiophen-2-ylmethyl)amino)benzenesulfonamide (1)
.beta.-Hydroxyphenylalanine (1)
Flavone base + 4O, 1Prenyl (1)
Cilostamide (1)
Thr-Cys (1)
(3-Aminopropyl)(diethoxymethyl)phosphinic acid (1)

First Public Date

2026 (11)
2025 (11)
2024 (10)
2023 (6)
2022 (3)
2021 (3)
2019 (2)
2020 (1)
2018 (1)
2016 (1)
2014 (1)

Classification

bacteria (8)

Modification

15.994915 (1)
57.021464 (1)

Study type

DNA-seq (1)
Transcription profiling by array (1)
RNA-seq of total RNA (1)
RNA-seq of coding RNA (1)

Release Date

2025 (75)
2023 (72)
2024 (71)
2022 (63)
2021 (40)
2020 (36)
2018 (31)
2016 (23)
2019 (22)
2017 (22)
2014 (16)
2015 (15)
2026 (11)
2013 (9)
2011 (5)
2012 (4)
2009 (3)
2008 (2)
2010 (1)
2002 (1)

Lab affiliation

Department of Biochemistry & Molecular Biology, Monash Biomedicine Discovery Institute, Monash University, Clayton 3800, Australia (2)
Fourth Hospital of Hebei Medical University (2)
Aarhus University, Denmark (1)
Australian Institute of Tropical Health and Medicine. Centre for Molecular Therapeutics. James Cook Univerisity, Cairns. (1)
Baker Heart and Diabetes Inst. (1)
Baker Heart and Diabetes Institute (1)
Biozentrum, University of Basel, Basel, Switzerland (1)
Centro Científico y Tecnológico de Excelencia Ciencia & Vida, Fundación Ciencia & Vida, Santiago, Chile. Instituto Milenio de Oceanografía (IMO), Universidad de Concepción, Concepción, Chile. (1)
Chun-Hung Lin's Lab, Institute of Biological Chemistry, Academia Sinica, No. 128 Academic Road Section 2, Nan-Kang, Taipei, 11529, Taiwan (1)
Cornell University (1)
Department oF Biological Sciences, University of Alberta (1)
Department of Chemistry, Biotechnology and Food Science Norwegian University of Life Sciences Post Office Box 5003 1432, Ås Norway (1)
Department of Life Science (1)
Department of Life Sciences, POSTECH, Pohang, Republic of Korea (1)
Department of Medical Microbiology and Infectious Diseases University of Manitoba 745 Bannatyne Avenue Winnipeg, MB, Canada, R3E 0J9 (1)
Department of Microbiology, Institute of Biomedical Sciences, University of São Paulo (1)
Department of Molecular Microbiology, Washington University School of Medicine, 4940 Parkview Place, Campus Box 8230, St. Louis, MO 63110, USA (1)
Department of Molecular and Cellular Biology, University of Guelph, Guelph, ON, Canada, N1G 2W1; bSPARC BioCentre, The Hospital for Sick Children, Toronto, ON, Canada, M5G 0A4. (1)
Dipartimento di Medicina, Chirurgia e Odontoiatria "Scuola Medica Salernitana" Università degli Studi di Salerno Via Salvador Allende, 84081 Baronissi (SA) UOC Farmacologia Clinica AOU San Giovanni di Dio e Ruggi d'Aragona Via San Leonardo, 1, 84131 Salerno SA (1)
Division of Oral Microbiology and Immunology, Department of Operative Dentistry, Periodontology and Preventive Dentistry, Rheinisch-Westfälische Technische Hochschule (RWTH) University Hospital, Aa-chen, Germany (1)
EDyP (1)
GlaxoSmithKline, Siena, Italy (1)
Graduate Institute of Life Sciences, National Defense Medical Center, Taipei, Taiwan (1)
Helmholtz Centre for Environmental Research GmbH - UFZ Department of Molecular Systems Biology Permoserstraße 15, 04318 Leipzig, Germany (1)
KOREA BASIC SCIENCE INSTITUTE (1)
Lab. Functional Proteomics, Dept Life Sciences, University of Siena, Italy (1)
Laboratorio de Biofilms Microbianos, Departamento de Microbiología, Instituto de Investigaciones Biológicas Clemente Estable (1)
Laboratory of Functional Microbiology and Livestock Health, School of Animal Science and Technology, Henan University of Science and Technology (1)
Laboratory of Molecular Environmental Microbiology, Department of Environmental Science and Ecological Engineering, Korea University, Seoul 02841, Republic of Korea (1)
Laboratory of proteomic analysis of Scientific Research Institute of Physical-Chemical Medicine, Moscow, Russia (1)

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Metabolic-engineered probiotic-OMVs as nanovaccine mediating sequential immunomodulation for chronic bone infection immunotherapy

Chronic, drug-resistant bone infection caused by methicillin-resistant Staphylococcus aureus (MRSA) features an immunosuppressive niche enabling persistent infection and impaired bone healing. Specific treatment requires initial antibacterial immune activation against infection, followed by resha...

2026-03-19 | MTBLS14091 | MetaboLights

Proteome of mass-produced Escherichia coli outer membrane vesicles

Large-scale production of bacterial extracellular vesicles is a hurdle for their development as novel cancer immunotherapeutic agents. Here, we developed manufacturing processes for mass production of Escherichia coli EVs known as outer membrane vesicles (OMVs). We present a comprehensive proteome o...

ORGANISM(S): Escherichia coli Bacteria

2023-10-24 | PXD043119 | Pride

The proteome of Fibrobacter succinogenes S85 outer membrane vesicles

Here, we illustrate the proteomic composition and hydrolytic capacity of outer membrane vesicles (OMVs) produced by F. succinogenes during growth on Avicel cellulose and show that the OMVs are equipped with a highly versatile polysaccharide-degrading machinery. Proteomic assessment identified an enr...

ORGANISM(S): Fibrobacter succinogenes subsp. succinogenes S85

2017-06-30 | PXD005442 | Pride

Outer membrane vesicles Omv Hydrolytic enzymes

Localisation of outer membrane proteins in Treponema denticola by quantitative proteome analyses of outer membrane vesicles and cellular fractions

The identification and localisation of outer membrane proteins (Omps) and lipoproteins in pathogenic treponemes such as T. denticola (periodontitis) and T. pallidum (syphilis) has been challenging largely due to the structural uniqueness of their outer membranes (OM), the high abundance of inner mem...

ORGANISM(S): Treponema denticola ATCC 35405

2019-02-20 | PXD011495 | Pride

Treponema denticola Localization Outer membrane vesicles Bacterial lipoproteins Maxquant Outer membrane proteins Orbitrap

Porphyromonas gingivalis Sphingolipids Affect Early Responses of Macrophages to Outer Membrane Vesicles (OMVs)

PRJNA1378875 | ENA

Lipopolysaccharide Imprinted Polymers for Specific Recognition of Bacterial Outer Membrane Vesicles

We introduce lipopolysaccharide (LPS) molecularly imprinted polymer (MIP) for efficient capturing and analyzing OMVs, enabling a novel approach to bacterial disease diagnosis based on biorecognition materials. LPS, a unique structure of Gram-negative bacteria, acts as a template molecule capable of ...

ORGANISM(S): Escherichia Coli-thermotoga Shuttle Vector Pdh10

PXD056387 |

Outer membrane vesicle proteome of Aggregatibacter actinomycetemcomitans serotype e strain 173

Aggregatibacter actinomycetemcomitans is an oral and systemic pathogen associated with aggressive forms of periodontitis, and with endocarditis. Outer membrane vesicles (OMVs) released by this species have been demonstrated to deliver effector proteins such as cytolethal distending toxin (CDT) and l...

ORGANISM(S): Aggregatibacter actinomycetemcomitans (Actinobacillus actinomycetemcomitans) (Haemophilus actinomycetemcomitans)

2015-09-21 | PXD002509 | Pride

Gram negative Aggregatibacter actinomycetemcomitans Outer membrane vesicles Lc-ms/ms

Preliminary investigation of iron acquisition mechanism in hypervirulent Klebsiella pneumoniae mediated by outer membrane vesicles

To investigate the role of outer membrane vesicles (OMVs) and related proteins in iron acquisition mechanism of hypervirulent Klebsiella pneumoniae (HVKP) and classic Klebsiella pneumoniae (cKP).

ORGANISM(S): Klebsiella Pneumoniae Subsp. Pneumoniae Ntuh-k2044 Klebsiella Pneumoniae

PXD028057 |

short RNA-Seq of Pseudomonas aeruginosa outer membrane vesicles (OMVs) and whole cells

Characterization of the sRNA content of P. aeruginosa OMVs compared to whole cells. Result: OMVs contain differentially packaged sRNAs. Whole cell PA14 and OMVs from 3 separate preparations.

ORGANISM(S): Pseudomonas aeruginosa PAO1

2016-05-13 | E-GEOD-71598 | biostudies-arrayexpress

mRNA transcript distribution bias between Borrelia burgdorferi bacteria and their outer membrane vesicles

PRJNA471082 | ENA

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