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Unknown (1576)
Transcriptomics (112)
Genomics (62)
Proteomics (52)
Metabolomics (21)
Other (1)

Organisms

Homo sapiens (120)
Mus musculus (54)
Saccharomyces cerevisiae (7)
Rattus norvegicus (5)
mixed sample (3)
Caenorhabditis elegans (3)
Drosophila melanogaster (3)
synthetic construct (2)
Arabidopsis thaliana (2)
Mycobacterium tuberculosis (2)
Mycobacterium tuberculosis H37Rv (2)
Yersinia pestis CO92 (2)
Eucalyptus camaldulensis x Eucalyptus grandis (1)
Drosophila simulans (1)
Nicotiana benthamiana (1)
Streptomyces coelicolor (1)
Triticum aestivum (1)
Danio rerio (1)
Bacillus anthracis str. Ames (1)
Bacteria (1)
Human alphaherpesvirus 1 (1)
Human alphaherpesvirus 1 strain KOS (1)
Marsilea mutica (1)
Mycolicibacterium smegmatis (1)
Ricinus communis (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 (1)
Sarcophilus harrisii (1)

Organisms

Homo sapiens (2)

Repository

biostudies-arrayexpress (122)
EGA (50)
pride (45)
MetaboLights (19)
MassIVE (4)
PAXDB (3)
GNPS (2)
ENA (2)
GPMDB (1)

Tissue

Cell culture (20)
Embryonic stem cell (5)
Macrophage (4)
Dendritic cell (2)
Liver (2)
Primary cell (2)
Astrocyte (1)
Blood (1)
Blood platelet (1)
Bone tissue (1)
Brain (1)
Breast (1)
Cell suspension culture (1)
Embryo (1)
Epithelial cell (1)
Epithelial cell differentiation involved in embryonic placenta development (1)
Epithelial cell of pancreas (1)
Fat body (1)
Fibroblast (1)
Frond (1)
Leaf (1)
Melanocyte (1)
Neuronal stem cell (1)
Pancreas (1)
Platelet (1)
Whole body (1)

Disease

Melanoma (4)
Tuberculosis (4)
Leukemic (1)
Nevus (1)
Not Available (1)
Brain cancer (1)
Breast cancer (1)
Lung adenocarcinoma (1)
Malignant neoplasm of ovary (1)
Osteosarcoma (1)
Pancreatic ductal adenocarcinoma (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (45)
Shotgun proteomics (21)
Mass spectrometry (15)
Bottom-up proteomics (10)
Illumina 15K (8)
Affinity purification coupled with mass spectrometry proteomics (7)
Data-independent acquisition (4)
DiaPASEF (4)
Data-dependent acquisition (3)
Mass spectrometry assay (2)
NMR spectroscopy (2)
All-ion fragmentation (2)
Immunopeptidomics (2)
Affymetrix 6.0 (1)
Illumina (various), Illumina (Various) (1)
Illumina 1.2M, Affymetrix 6.0 (1)
Illumina HiSeq 2000 (1)
Illumina_670k - Illuminus, Affymetrix 6.0, Illumina 1.2M (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (11)
Liquid Chromatography MS - positive - reverse phase (11)
NextSeq 500 (8)
Illumina HiSeq 2500 (7)
Illumina HiSeq 4000 (5)
NextSeq 550 (4)
Liquid Chromatography MS - negative - reverse phase (4)
NextSeq 2000 (3)
GenePix 4000A [Axon Instruments] (2)
Q Exactive (2)
SYNAPT G2-Si (2)
TSQ Altis (2)
Xevo G2 XS Tof (2)
Xevo G2-XS QTof (2)
Orbitrap Fusion Lumos (2)
Nuclear Magnetic Resonance (NMR) - (2)
Scanning hardware (1)
Q Exactive Plus (1)
Instrument (1)
MaXis (1)
Atmospheric Pressure Matrix Assisted Laser Desorption/Ionization orbitrap MS - Positive (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - positive - hilic (1)
MS Imaging - Atmospheric Pressure Matrix Assisted Laser Desorption/Ionization orbitrap MS - Positive (1)
Tandem Gas Chromatography MS - positive (1)

Publication Date

2024 (23)
2023 (21)
2015 (15)
2021 (13)
2026 (12)
2022 (12)
2014 (10)
2025 (9)
2010 (9)
2008 (8)
2019 (7)
2012 (7)
2018 (6)
2017 (6)
2007 (6)
2006 (6)
2020 (5)
2016 (5)
2013 (5)
2011 (5)
2009 (3)
2005 (1)
2003 (1)

UNIPROT ID/AC

4565.Traes_1DL_692C9DA67.1 (3)
4565.Traes_1DL_CC664F4B6.1 (3)
4565.Traes_1DS_66B67E9B41.2 (3)
4565.Traes_2BL_7B50D9C87.1 (3)
4565.Traes_2DL_86DFC9B0B.1 (3)
4565.Traes_2DL_EFEF40224.1 (3)
4565.Traes_2DS_D09901183.1 (3)
4565.Traes_3B_04EEDB7DF.1 (3)
4565.Traes_3B_FFA902DFC.1 (3)
4565.Traes_3DL_EA981FE27.1 (3)
4565.Traes_3DL_EB6A17449.1 (3)
4565.Traes_4DL_BBA5E7BFC.1 (3)
4565.Traes_4DL_D2F5D476F.1 (3)
4565.Traes_4DL_FB5D1C901.1 (3)
4565.Traes_4DS_557846977.1 (3)
4565.Traes_4DS_8D47B4C37.1 (3)
4565.Traes_4DS_D4B68AD99.1 (3)
4565.Traes_5BS_2983EE249.1 (3)
4565.Traes_5DL_17E38786F.1 (3)
4565.Traes_5DL_7C5517ADE.1 (3)
4565.Traes_5DL_95DBDBAD1.1 (3)
4565.Traes_5DL_ABE67F1AD.1 (3)
4565.Traes_5DL_D80132A30.1 (3)
4565.Traes_5DL_D994DF96F.1 (3)
4565.Traes_5DL_E2AF5FEA6.1 (3)
4565.Traes_5DL_FCD84F216.1 (3)
4565.Traes_6BS_68144968E.2 (3)
4565.Traes_6BS_6D2A626DE.2 (3)
4565.Traes_6BS_8DA635027.1 (3)
4565.Traes_6DL_1BCF08167.1 (3)

CHEBI ID

CHEBI:16359 (3)
CHEBI:16704 (3)
CHEBI:16811 (3)
CHEBI:17750 (3)
CHEBI:28865 (3)
CHEBI:35038 (3)
CHEBI:64563 (3)
CHEBI:73024 (3)
CHEBI:139138 (2)
CHEBI:143745 (2)
CHEBI:143757 (2)
CHEBI:15354 (2)
CHEBI:15355 (2)
CHEBI:15428 (2)
CHEBI:15676 (2)
CHEBI:15727 (2)
CHEBI:15891 (2)
CHEBI:16335 (2)
CHEBI:16709 (2)
CHEBI:16919 (2)
CHEBI:173703 (2)
CHEBI:18186 (2)
CHEBI:18211 (2)
CHEBI:18237 (2)
CHEBI:182784 (2)
CHEBI:18295 (2)
CHEBI:195271 (2)
CHEBI:21949 (2)
CHEBI:24898 (2)
CHEBI:25094 (2)

Metabolite Name

Cholic acid (3)
Choline (3)
Glycine (3)
Tris(2-butoxyethyl) phosphate (3)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
9(10)-EpOME (2)
Acetic acid (2)
Acetylcarnitine (2)
Acetylcholine (2)
Anserine (2)
Betaine (2)
Carnosine (2)
Citric acid (2)
Citrulline (2)
Creatine (2)
Creatinine (2)
Elaidic acid (2)
Formic acid (2)
Glutamine (2)
Histamine (2)
Histidine (2)
Isoleucine (2)
L-Alanine (2)
L-Carnitine (2)
L-Glutamic acid (2)
L-Glutamine (2)
L-Histidine (2)

First Public Date

2024 (1)
2019 (1)

Study type

Transcription profiling by array (56)
RNA-seq of coding RNA (30)
ChIP-seq (8)
Genotyping by array (5)
RNA-seq of coding RNA from single cells (5)
Comparative genomic hybridization by array (3)
ChIP-chip by tiling array (2)
Transcription profiling by tiling array (2)
RNA-seq of total RNA (2)
Unknown experiment type (1)
One-color microarray (1)
Animal - High-throughput sequencing (1)
RNAi profiling by array (1)
ChIP-chip by array (1)
ATAC-seq (1)
DNA-seq (1)
Methylation profiling by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2022 (190)
2023 (179)
2021 (158)
2025 (139)
2024 (134)
2020 (109)
2018 (103)
2019 (102)
2015 (83)
2017 (72)
2016 (65)
2014 (61)
2013 (54)
2012 (51)
2011 (39)
2010 (33)
2008 (33)
2009 (27)
2026 (22)
2006 (14)
2007 (13)
2003 (4)
2000 (4)
2005 (3)
2004 (2)
1999 (2)
2002 (1)

Lab affiliation

Proteomics Core Facility and Research Group Proteomics, CEITEC-MU, Masaryk University, Brno, Czech Republic (7)
University of Dundee, School of Life Sciences (4)
Massachusetts Institute of Technology (3)
Pacific Northwest National Laboratory (3)
Centre for Gene Regulation and Expression School of Life Sciences, University of Dundee, Dundee (2)
Molecular Cell and Developmental Biology, School of Life Sciences, University of Dundee, United Kingdom (2)
Cancer Research UK Manchester Institute (1)
Centre for Gene Regulation and Expression School of Life Sciences, University of Dundee (1)
Centre for Gene Regulation and Expression School of Life Sciences, University of Dundee, Dundee, United Kingdom (1)
Centre for Gene Regulation and Expression, School of Life Science, University of Dundee (1)
Department of Biochemistry, Schulich School of Medicine and Dentistry, Western University, London, ON, N6A 5C1, Canada (1)
Department of Biological Engineering, Massachusetts Institute of Technology (1)
Department of Biomedical Engineering, 3303 SW Bond Avenue, Center for Health and Healing CH13B, Oregon Health & Science University, Portland, OR 97239, USA (1)
Department of Pathology, University of Cambridge (1)
Department of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany (1)
Deputy Head (Research), Department of Biochemistry and Molecular Biology Head Immunoproteomics Laboratory Infection and Immunity Program Room 214, level 2, 15 Innovation Walk Monash Biomedicine Discovery Institute Monash University Clayton 3800 Victoria Australia (1)
Division of Molecular and Cellular Function School of Biological Sciences The University of Manchester M139PT Manchester UK (1)
Dundee University, School of Life Sciences (1)
Leibniz Institute for Virology (1)
Lund University Sölvegatan 35 223 62 – Lund Sweden (1)
MRC London Institute of Medical Sciences Proteomics & Metabolomics Facility Hammersmith Hospital Campus Du Cane Road London, W12 0NN United Kingdom (1)
Massachusetts Institute of Technology, Koch Institute for Integrative Cancer Research, Center for Precision Cancer Medicine (1)
Pacific Northwest National Laboratory, Richland WA USA (1)
Professor of Chemical Biology, Imperial College London Satellite Group Leader, Francis Crick Institute Founder & SAB, Myricx Pharma Ltd Room 301B, Molecular Sciences Research Hub, White City Campus 82 Wood Lane, London W12 0BZ, UK Tel.: 020759 + Ext. 43752 or 45821 (group) http://www.imperial.ac.uk/tate-group/ (1)
Professor of Microbial Pathogenesis Institute of Integrative Biology Room 308, Biosciences Building, University of Liverpool Crown Street, Liverpool L69 7ZB, United Kingdom (1)
School of Biosciences University of Sheffield United Kingdom (1)
School of Life Sciences Faculty of Science University of Technology Sydney NSW 2007 (1)
School of Molecular Sciences, The University of Western Australia, Perth, WA 6009, Australia (1)
Section of Investigative Medicine Imperial College London (1)
The University of Sydney, School of Life and Environmental Sciences, Charles Perkins Centre, Sydney, New South Wales, Australia. (1)

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