P23 - OmicsDI

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Transcriptomics (491)
Unknown (257)
Genomics (121)
Proteomics (52)
Metabolomics (6)
Methylation profiling (1)
Other (1)

Organisms

Homo sapiens (257)
Mus musculus (206)
Rattus norvegicus (31)
Yersinia pestis (9)
Arabidopsis thaliana (7)
Saccharomyces cerevisiae (7)
Drosophila melanogaster (6)
Sus scrofa (4)
Taeniopygia guttata (3)
Thermus thermophilus HB8 (3)
Micropterus salmoides (2)
Nicotiana tabacum (2)
Canis lupus familiaris (2)
Escherichia coli (2)
Kalanchoe daigremontiana (1)
Schizophyllum commune (1)
Bombyx mori (1)
Ciona intestinalis (1)
Macaca mulatta (1)
Equus caballus (1)
Daphnia magna (1)
Staphylococcus aureus subsp. aureus USA300 (1)
Bos taurus (1)
Ovis aries (1)
Oryza sativa Japonica Group (1)
Escherichia coli K-12 (1)
Ixodes ricinus (1)
Nicotiana benthamiana (1)
Rattus rattus (1)
Ebola virus (1)

Organisms

Mus musculus (23)
Homo sapiens (7)
marine metagenome (5)
groundwater metagenome (4)
Thermus thermophilus HB8 (2)
hot springs metagenome (2)
Pseudomonas aeruginosa (2)
Rattus norvegicus (2)
Saccharomyces cerevisiae (2)
Parasegetibacter sp. NRK P23 (1)
Clostridioides difficile P23 (1)
Vibrio phage P23 (1)
Deltaproteobacteria bacterium SCGC AD-261-P23 (1)
Planctomycetes bacterium SCGC AAA290-P23 (1)
Epsilonproteobacteria bacterium SCGC AD-311-P23 (1)
Phaeobacter piscinae (1)
Pseudomonas wadenswilerensis (1)
Staphylococcus aureus subsp. aureus USA300 (1)
Robertmurraya mesotrionivorans (1)
Acinetobacter calcoaceticus (1)
tidal flat metagenome (1)
Ixodes ricinus (1)
Bos taurus (1)
soil metagenome (1)

Repository

biostudies-arrayexpress (505)
ENA (77)
geo (26)
MassIVE (19)
jPOST (17)
pride (9)
EGA (6)
MetaboLights (6)
iProX (3)
PanoramaPublic (2)
PAXDB (2)

Tissue

Inner ear (2)
Utricle (2)
Vestibular hair cell (2)
Brain (1)
Cell culture (1)
Epithelial cell (1)
Hepatocyte (1)
Liver (1)
Permanent cell line cell (1)

Disease

Normal (2)
HIV encephalitis (1)
Early-life seizures (1)
Locally advanced breast carcinoma (LABC; non-inflammatory) (1)
Alveolar rhabdomyosarcoma (1)
Multiple congenital malformation (1)
Leukemia (1)
Melanoma (1)
Colon adenocarcinoma (1)
Locally advanced rectal cancer (1)
Exposed_Seronegative (1)
Osteosarcoma (1)
Glioblastoma (1)
Multiple myeloma (1)

Technology Type

Mass Spectrometry (9)
Mass spectrometry (4)
Shotgun proteomics (4)
Illumina HiSeq 2000, ILLUMINA (3)
Mass spectrometry assay (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Illumina HiSeq 2500 (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Bottom-up proteomics (1)
HDMSE (1)
MSE (1)
Top-down proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (13)
Illumina HiSeq 2500 (10)
NextSeq 500 (5)
Illumina HiSeq 1500 (4)
Q Exactive HF (4)
Illumina HiSeq 2000 (3)
Illumina HiSeq 4000 (3)
LTQ Orbitrap Elite (3)
Orbitrap Fusion Lumos (3)
NextSeq 2000 (2)
Illumina MiSeq (2)
Orbitrap Fusion (2)
Q Exactive (2)
Q Exactive HF-X (2)
Q Exactive Plus (2)
DNBSEQ Eukaryotic Stranded Transcriptome library preparation- Stranded mRNA Library (1)
MA900, Sony (1)
10x Chromium Controller (1)
G2565BA DNA microarray scanner (1)
GenePix 4000A [Axon Instruments] (1)
Illumina Genome Analyzer IIx (1)
GenePix 4000B [Axon Instruments] (1)
Illumina HiSeq 1000 (1)
DNBSEQ-T7 (1)
NextSeq 550 (1)
LTQ (1)
LTQ Orbitrap XL (1)
MaXis (1)
Orbitrap Eclipse (1)
Orbitrap Exploris 480 (1)

Publication Date

2012 (64)
2014 (59)
2015 (58)
2013 (56)
2010 (55)
2011 (43)
2008 (39)
2016 (35)
2007 (22)
2009 (19)
2025 (18)
2024 (17)
2022 (14)
2021 (14)
2018 (13)
2023 (12)
2020 (11)
2005 (10)
2019 (9)
2017 (7)
2006 (5)
2026 (4)
2004 (2)

UNIPROT ID/AC

10090.ENSMUSP00000072775 (2)
10090.ENSMUSP00000079944 (2)
10090.ENSMUSP00000105709 (2)
10090.ENSMUSP00000117461 (2)
10090.ENSMUSP00000127198 (2)
10090.ENSMUSP00000132065 (2)
10090.ENSMUSP00000132102 (2)
10090.ENSMUSP00000136357 (2)
10090.ENSMUSP00000136375 (2)
10090.ENSMUSP00000136544 (2)
10090.ENSMUSP00000137171 (2)
10090.ENSMUSP00000137236 (2)
1433B_MOUSE (2)
1433E_MOUSE (2)
1433Z_MOUSE (2)
2AAA_MOUSE (2)
3BHS1_MOUSE (2)
3HIDH_MOUSE (2)
4F2_MOUSE (2)
6PGD_MOUSE (2)
6PGL_MOUSE (2)
A0A087WQ89_MOUSE (2)
A0A140T8T4_MOUSE (2)
A0A1W2P6N8_MOUSE (2)
AACS_MOUSE (2)
AAK1_MOUSE (2)
AATC_MOUSE (2)
ABCA5_MOUSE (2)
ABHEB_MOUSE (2)
ACAD9_MOUSE (2)

CHEBI ID

CHEBI:16347 (3)
CHEBI:17924 (2)
CHEBI:17750 (2)
CHEBI:229268 (1)
CHEBI:246422 (1)
CHEBI:58595 (1)
CHEBI:58593 (1)
CHEBI:170063 (1)
CHEBI:73989 (1)
CHEBI:15641 (1)
CHEBI:18066 (1)
CHEBI:16436 (1)
CHEBI:6650 (1)
CHEBI:57589 (1)

Metabolite Name

5-Methyltetrahydrofolic acid (3)
Imidazoleacetic acid (3)
Purine (3)
L-Asparagine (3)
L-Histidine (3)
L-Glutamic acid (3)
L-Tryptophan (3)
L-Serine (3)
Nicotinamide adenine dinucleotide phosphate (2)
3-Hydroxy-3-methylglutaric acid (2)
Flavin adenine dinucleotide (2)
3-Aminoisobutyric acid (2)
Cytidine-5'-monophosphate (2)
Ethanolamine (2)
Normetanephrine (2)
Hypotaurine (2)
Epinephrine (2)
Glycodeoxycholic acid (2)
Nicotinamide N-oxide (2)
Desoxycortone (2)
Uracil (2)
Thymine (2)
Quinolinic acid (2)
Prostaglandin E2 (2)
O-Phosphoethanolamine (2)
L-Lysine (2)
L-Aspartic acid (2)
Glycochenodeoxycholic acid (2)
Cysteine-S-sulfate (2)
Carnosine (2)

First Public Date

2025 (10)
2018 (10)
2014 (9)
2024 (8)
2021 (6)
2020 (6)
2017 (6)
2023 (5)
2022 (4)
2026 (3)
2019 (3)
2013 (3)
2016 (2)
2015 (2)

Classification

bacteria (4)
viruses (1)

Study type

Transcription profiling by array (357)
RNA-seq of coding RNA (44)
ChIP-seq (26)
Unknown experiment type (12)
Methylation profiling by array (12)
Comparative genomic hybridization by array (10)
Other (7)
Methylation profiling by high throughput sequencing (6)
Cell line - High-throughput sequencing (4)
RNA-seq of coding RNA from single cells (4)
High-throughput sequencing (3)
Transcription profiling by RT-PCR (3)
Animal - High-throughput sequencing (2)
RNAi profiling by array (2)
ChIP-chip by array (2)
Genotyping by array (2)
ATAC-seq (2)
RNA-seq of total RNA (2)
Transcription profiling by SAGE (1)
Human - One-color microarray (1)
Transcription profiling by tiling array (1)
MicroRNA profiling by array (1)
RNA-seq of non coding RNA (1)

Release Date

2012 (77)
2015 (71)
2014 (67)
2013 (65)
2010 (64)
2011 (53)
2016 (47)
2008 (46)
2009 (32)
2007 (28)
2020 (24)
2022 (22)
2021 (22)
2025 (21)
2019 (20)
2023 (18)
2024 (16)
2018 (11)
2017 (10)
2005 (10)
2006 (9)
2004 (6)
2003 (4)
2000 (4)
1998 (4)
2026 (3)
2002 (3)
2001 (2)
1997 (2)
1999 (1)

Lab affiliation

CSIRO Black Mountain, Australia (1)
Center for Protein Assemblies, Department of Chemistry, Technische Universität München, Ernst-Otto-Fischer Str. 8, 85747 Garching, Germany (1)
Director, Proteome Center Rostock, University of Rostock, Germany (1)
Fudan University (1)
Group leader (1)
Max Planck Institute for Multidisciplinary Sciences, Bioanalytical Mass Spectrometry Group, Am Fassberg 11, 37077 Göttingen, Germany University Medical Center Goettingen, Institute for Clinical Chemistry, Bioanalytics, Robert-Koch-Strasse 40, 37075 Göttingen, Germany (1)
Oregon Hearing Research Center Oregon Health & Science University Portland OR 97239 (1)
Oregon Hearing Research Center Oregon Health & Science University Portland OR 97239 USA (1)
Radboud Institute for Molecular Life Sciences, Radboud University, Nijmegen - the Netherlands (1)

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Clostridioides difficile P23

Clostridioides difficile P23 Genome sequencing and assembly

PRJNA85989 | ENA

A direct interplay between the co-chaperones Hop and p23 regulates cycle progression and client folding in the Hsp70/Hsp90 chaperone machineries

Folding of stringent clients requires transfer from Hsp70 to Hsp90. The co-chaperone Hop physically connects the chaperone machineries. Here we define its role from the remodeling of Hsp70/40-client complexes to the mechanism of client transfer and the conformational switching from stalled to active...

ORGANISM(S): Homo sapiens (Human) Saccharomyces cerevisiae (Baker's yeast)

2022-02-24 | PXD027413 | Pride

Pseudomonas aeruginosa strain:P23 | isolate:P23

Pseudomonas aeruginosa strain:P23 | isolate:P23 Genome sequencing

PRJNA681716 | ENA

Parasegetibacter sp. NRK P23

Parasegetibacter sp. NRK P23 Genome sequencing and assembly

PRJNA836554 | ENA

SILAC immunoprecipitations for rabbit haemorrhagic disease virus (RHDV) proteins p23 and RNA-dependent RNA polymerase

Rabbit haemorrhagic disease virus (RHDV) belongs to the family Caliciviridae, genus Lagovirus and is used in Australia as a biocontrol tool to keep the population of european rabbits low. This virus has a positive-sense single-stranded RNA genome that encodes structural (capsid) and non-structural p...

ORGANISM(S): Oryctolagus cuniculus cuniculus

2022-10-14 | PXD031619 | Pride

Interactors Silac Co-ip Rhdv

Planctomycetes bacterium SCGC AAA290-P23

Planctomycetes bacterium SCGC AAA290-P23 Genome sequencing

PRJNA234793 | ENA

Pseudomonas aeruginosa strain:P23

Pseudomonas aeruginosa strain:P23 Genome sequencing

PRJNA1414841 | ENA

Acinetobacter calcoaceticus strain:P23

Acinetobacter calcoaceticus P23 genome sequencing project

PRJDB2977 | ENA