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MetabolomicsMultiomics of tomato glandular trichomes reveals distinct features of central carbon metabolism supporting high productivity of specialized metabolites
Glandular trichomes are metabolic cell factories with the capacity to produce large quantities of secondary metabolites. Little is known about the connection between central carbon metabolism and metabolic productivity for secondary metabolites in glandular trichomes. To address this gap in our know...
2017-04-25 | MTBLS297 | MetaboLights
MetabolomicsClusia genomes shed light on the evolution and diversity of CAM physiotypes

225 years ago, Alexander von Humboldt observed the first crassulacean acid metabolism (CAM) tree, Clusia rosea (Clusiaceae). Since then, the photosynthetic and ecophysiological plasticity of Clusia

species have captivated the minds of plant scientists worldwide. CAM is a physiological adapt...

2026-03-23 | MTBLS14075 | MetaboLights
TranscriptomicsMacrophage samples from the HMDP
Identify genes involved in regulation of inflammatory responses and gene-environemnt interactions, in macrophages from a set of mouse inbred strains termed the HMDP. The HMDP is a genetically diverse mapping panel comprised of classical inbred and recombinant inbred wild type mice. The RMA values o...
ORGANISM(S): Mus musculus 
2012-10-26 | E-GEOD-38705 | biostudies-arrayexpress
UnknownFuture bioenergy expansion could alter carbon sequestration potential and exacerbate water stress in the United States.
Not available
S-EPMC11633087 | biostudies-literature
Genomicsena-DATASET-GILD-07-06-2019-00:26:08:971-10 - samples
Deep sequencing of viral samples (average ~9,000x coverage) from patients chronically infected with Hepatitis B (HBV). Whole HBV genome sequencing of 1467 patients (1102 in discovery and 365 in validation cohort) chronically infected with HBV at baseline. The patient population contained HBV genot...
EGAD00001005075 | EGA
ProteomicsHeterogeneous Nuclear Ribonucleoprotein A1 (hnRNPA1) Maintains Muscle Progenitor Identity by Stabilizing the Ppp1r1b-lncRNA-PRC2 Complex
The Pierce™ Magnetic RNA–Protein Pull-Down Kit (Thermo Fisher Scientific) was used to examine proteins associated with Ppp1r1b-lncRNA. The assay was performed using C2C12 cell lysates prepared from both undifferentiated and differentiated states. Full-length in vitro–transcribed Ppp1r1b-lncRNA was u...
ORGANISM(S): Mus musculus (Mouse) 
2026-05-25 | PXD072229 | Pride
TranscriptomicsBone microarray profiles from the Hybrid Mouse Diversity Panel
Significant advances have been made in the discovery of genes affecting bone mineral density (BMD); however, our understanding of its genetic basis remains incomplete. In the current study, genome-wide association (GWA) and co-expression network analysis was used in the recently described Hybrid Mo...
ORGANISM(S): Mus musculus 
2011-02-25 | E-GEOD-27483 | biostudies-arrayexpress
UnknownGlobal analysis of differentially expressed genes between two Japonica rice varieties induced by low temperature during the booting stage by RNA-Seq.
Not available
S-EPMC7353964 | biostudies-literature
UnknownA metagenomics workflow for SARS-CoV-2 identification, co-pathogen detection, and overall diversity.
Not available
S-EPMC8564975 | biostudies-literature
TranscriptomicsTranscriptome sequencing of Foxtail millet Setaria italica for different tissues
Transcriptome sequencing of Foxtail millet Setaria italica (Zhang-gu) for different tissues. Four RNA pools were created corresponding to four different tissues: root, leaf, stem, spica (tassel) at developmental stage, then each pool was sequenced.
ORGANISM(S): Setaria italica 
2012-03-31 | E-GEOD-36391 | biostudies-arrayexpress
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