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TranscriptomicsTranscriptome analysis of the archaeon Thermoplasma acidophilum cultured under aerobic and anaerobic conditions
Investigation of whole genome gene expression level changes in Thermoplasma acidophilum cultured under aerobic and anaerobic conditions. The analysis are further described in Na Sun, Cuiping Pan, Stephan Nickell, Matthias Mann, Wolfgang Baumeister, and István Nagy, Quantitative proteome and transcri...
ORGANISM(S): Thermoplasma acidophilum DSM 1728 
2011-09-26 | E-GEOD-21956 | biostudies-arrayexpress
UnknownTrellis for efficient data and task management in the VA Million Veteran Program.
Not available
S-EPMC8636485 | biostudies-literature
ProteomicsGeneration of a deep mouse brain spectral library for transmembrane proteome profiling in mental disease models
The establishment of a high-quality mouse brain transmembrane proteins spectral library enables in-depth profiling of the proteins across multiple brain regions. DIA data analysis, combining different search pipeline based on the spectral library, discovered a new GPCR regulator which was associated...
ORGANISM(S): Mus Musculus 
2023-11-26 | PXD047251 |
ProteomicsLC-MS/MS-based 4D Label-Free N-Glycosylation Proteomics Analysis of Bone Marrow Cells from ADO2 Mouse
This project aims to investigate N-linked glycosylation modifications in bone marrow cells (BMCs) of an autosomal dominant osteopetrosis type 2 (ADO2) mouse model carrying the Clcn7 (r284w) mutation. Using LC-MS/MS-based 4D Label-Free N-Glycosylation Proteomics Analysis, we identified significant al...
ORGANISM(S): Mus Musculus 
2025-02-05 | PXD060501 |
ProteomicsLC-MS/MS-based 4D Label-Free Proteomics Analysis of Bone Marrow Cells from ADO2 Mice
This project focuses on the global proteomic profiling of bone marrow cells (BMCs) in the ADO2 mouse model using LC-MS/MS-based 4D Label-Free Proteomics Analysis. The study aims to identify differentially expressed proteins and elucidate potential molecular mechanisms underlying osteopetrosis pathog...
ORGANISM(S): Rattus Rattus 
2025-02-05 | PXD060536 |
ProteomicsMouse brain tissue proteomics-Shui group
DIA and PRM raw data of mouse brain tissues. R1: Cerebellum, R2: Midbrain, R3: Spinal cord
ORGANISM(S): Mus Musculus 
2019-11-26 | PXD016441 |
ProteomicsMultiregional profiling of the brain transmembrane proteome uncovers novel regulators of depression
Our study provides an enabling technology and rich data resources to expand the understanding of transmembrane proteome organization and dynamics in the brain as well as accelerate the discovery of potential therapeutic targets for depression treatment.
ORGANISM(S): Mus Musculus 
2021-07-26 | PXD027559 |
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