Pan Deng D - OmicsDI

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Proteomics (17)
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Populus tremula x Populus alba (8)
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biostudies-arrayexpress (19)
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pride (8)
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Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
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Liquid Chromatography MS - negative - reverse phase (3)
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Illumina HiSeq 2000 (1)
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CHEBI ID

CHEBI:194274 (2)
CHEBI:28593 (2)
CHEBI:28948 (2)
CHEBI:194263 (2)
CHEBI:180593 (2)
CHEBI:78759 (2)
CHEBI:6483 (2)
CHEBI:16330 (2)
CHEBI:74767 (2)
CHEBI:90355 (2)
CHEBI:16796 (2)
CHEBI:44597 (2)
CHEBI:6980 (2)
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CHEBI:21363 (2)
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CHEBI:28750 (2)
CHEBI:63795 (2)
CHEBI:28460 (2)
CHEBI:28918 (2)
CHEBI:168507 (2)
CHEBI:69081 (2)
CHEBI:40131 (2)
CHEBI:17898 (2)
CHEBI:30813 (2)
CHEBI:88824 (2)
CHEBI:71464 (2)
CHEBI:16164 (2)
CHEBI:183435 (2)

Metabolite Name

L-Glutamic acid (3)
Glycocholic acid (3)
Suberic acid (3)
Porphobilinogen (3)
Hippuric acid (3)
Tetrahydrogestrinone (2)
LysoPC(18:4(6Z,9Z,12Z,15Z)/0:0) (2)
Pyrazolopyrimidinone (2)
6-(3-((S)-1-Methoxypropan-2-yloxy)-5-((S)-1-phenylpropan-2-yloxy)benzamido)nicotinic acid (2)
Argentine (2)
N-Stearoyltaurine (2)
Rifampicin (2)
N-Myristoyl Proline (2)
Fluticasone propionate (2)
5-Phenyl-1,3-pentadiyne (2)
1-[2,3-Dimethyl-2-(2-methylbut-3-en-2-yl)furan-3-yl]-3,5-dihydroxy-4-methoxyhexan-2-one (2)
Cyclo(L-prolyl-L-valyl) (2)
S-(Formylmethyl)glutathione (2)
Sedoheptulose 1,7-bisphosphate (2)
Pantetheine 4'-phosphate (2)
2-(2-Thienylmethylene)-1,6-dioxaspiro[4.4]non-3-ene (2)
Spermic acid 2 (2)
N-Nitrosothiazolidine-4-carboxylic acid (2)
3-Oxo-4,6-choladienoic acid (2)
Guanosine diphosphate (2)
Acarbose (2)
Jervine (2)
Val-Gly-Val-Ala-Pro-Gly (2)
MG(LTE4/0:0/0:0) (2)
Arginylasparagine (2)

Study type

RNA-seq of coding RNA (7)
Transcription profiling by array (4)
ChIP-chip by tiling array (2)
ChIP-seq (2)
Unknown experiment type (1)
Comparative genomic hybridization by array (1)
DNA-seq (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2025 (81)
2022 (70)
2024 (69)
2021 (64)
2023 (62)
2020 (38)
2015 (24)
2019 (18)
2016 (15)
2018 (15)
2014 (14)
2026 (12)
2017 (12)
2012 (4)
2010 (3)
2009 (2)
2013 (1)
2006 (1)
2003 (1)

Lab affiliation

College of Pharmacy, Jinan University, Guangzhou, China (2)
State Key Laboratory of Medical Proteomics, National Chromatographic R. & A. Center, CAS Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, 457 Zhongshan Road, Dalian 116023, China. (1)
Nanjing Medical University (1)
Division of Endocrinology, Department of Internal Medicine, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China. (1)
Center for Cell Lineage and Development, CAS Key Laboratory of Regenerative Biology, Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, GIBH-HKU Guangdong-Hong Kong Stem Cell and Regenerative Medicine Research Centre, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou, China. (1)
Richard Dimbleby Laboratory of Cancer Research, School of Cancer & Pharmaceutical Sciences, King's College London, London, UK. UCL Cancer Institute, University College London, London, United Kingdom. Cancer Research UK City of London Centre. GSK (1)
Jinan University (1)

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Probing the pan genome of a foodborne bacterial pathogen Listeria monocytogenes

Full title: Probing the pan genome of a foodborne bacterial pathogen Listeria monocytogenes: Implications for its niche adaptation, pathogenesis, and evolution Listeria monocytogenes is a foodborne bacterial pathogen well known for adaptability to diverse environmental and host niches, and a high f...

ORGANISM(S): Listeria monocytogenes EGD-e

2010-04-06 | E-GEOD-20367 | biostudies-arrayexpress

Gene Expression Circulating B Lymphocytes for Smoking Females

B cells were found to be directly associated with the onset and development of many smoking-induced diseases. However, the in vivo molecular response of B cells underlying the female cigarette smoking remains unknown. Using the genome-wide Affymetrix HG-133A GeneChip® microarray, we compared the gen...

ORGANISM(S): Homo sapiens

2009-12-25 | E-GEOD-18723 | biostudies-arrayexpress

Sacha inchi oil alleviates gut microbiota dysbiosis and improves hepatic lipid dysmetabolism in high-fat diet-fed rats

Dietary ω-3 polyunsaturated fatty acids (PUFAs) are beneficial for humans against the development of hyperlipidaemia, but the underlying mechanisms are still poorly understood. Here, we demonstrated that oral consumption of sacha inchi oil, which is rich in α-linolenic acid, alleviated dyslipidemia,...

2022-02-21 | MTBLS1225 | MetaboLights

The S100 family is a prognostic biomarker and correlated with immune cell infiltration in pan-cancer.

Not available

S-EPMC11058162 | biostudies-literature

A pan-cancer analysis of the role of USP5 in human cancers.

Not available

S-EPMC10238416 | biostudies-literature

Clinical and immunological characteristics of TGM3 in pan-cancer: A potential prognostic biomarker.

Not available

S-EPMC9852731 | biostudies-literature

Circulating vitamin D binding protein, total, free and bioavailable 25-hydroxyvitamin D and risk of colorectal cancer.

Not available