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ProteomicsImproved sensitivity of immunopeptidomics by leveraging available large-scale pan-HLA spectral libraries and data-independent acquisition
Mass spectrometry is the state-of-the-art methodology for capturing the breadth and depth of the immunopeptidome across HLA allotypes and cell types. The majority of studies in the immunopeptidomics field are discovery-driven and data-dependent tandem mass spectrometry acquisition is commonly used, ...
ORGANISM(S): Homo sapiens (Human) 
2021-04-13 | PXD022950 | Pride
Pan-hla Immunopeptidomics Dia 
UnknownHLAEquity: Examining biases in pan-allele peptide-HLA binding predictors.
Not available
S-EPMC10770483 | biostudies-literature
UnknownPan-specific MHC class I predictors: a benchmark of HLA class I pan-specific prediction methods.
Not available
S-EPMC2638932 | biostudies-literature
UnknownNetMHCIIpan-3.0, a common pan-specific MHC class II prediction method including all three human MHC class II isotypes, HLA-DR, HLA-DP and HLA-DQ.
Not available
S-EPMC3809066 | biostudies-literature
UnknownPan-Cancer HLA Gene-Mediated Tumor Immunogenicity and Immune Evasion.
Not available
S-EPMC9357147 | biostudies-literature
ProteomicsExpanding the MAPPs assay to accommodate MHC-II pan re-ceptors for improved predictability of potential T cell epitopes
The appended raw files, csv files and other documents were deposited in the public domain in support for the publication "Expanding the MAPPs assay to accommodate MHC-II pan re-ceptors for improved predictability of potential T cell epitopes" by Katharina Hartman, Guido Steiner, Michel Siegel, Cary ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2023-08-25 | MSV000092747 | MassIVE
UnknownPan-cancer association of HLA gene expression with cancer prognosis and immunotherapy efficacy.
Not available
S-EPMC8329209 | biostudies-literature
UnknownDeepSeqPan, a novel deep convolutional neural network model for pan-specific class I HLA-peptide binding affinity prediction.
Not available
S-EPMC6349913 | biostudies-literature
UnknownA dominant, pan-DR binding epitope of Der p 1 in house dust mite allergy induces tolerance in HLA-DR4 transgenic mice.
Not available
S-EPMC12021919 | biostudies-literature
UnknownModular adjuvant-free pan-HLA-DR-immunotargeting subunit vaccine against SARS-CoV-2 elicits broad sarbecovirus-neutralizing antibody responses.
Not available
S-EPMC10067452 | biostudies-literature
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